RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 CAPN15O75808 1086 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 NTSR2O95665 410 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 MYL6BP14649 208 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 GPTP24298 496 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 HOXA10P31260 410 aaPredicted RBP11.37□□□□□ -0.59
ITSN1-228ENST00000479424 EPHX2P34913 555 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 PDIA6Q15084 440 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 NYXQ9GZU5 481 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 ZBTB3Q9H5J0 574 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 HACL1Q9UJ83 578 aa11.37□□□□□ -0.59
ITSN1-228ENST00000479424 FOXN1O15353 648 aa11.36□□□□□ -0.59
ITSN1-228ENST00000479424 GTF2E1P29083 439 aaPredicted RBP11.36□□□□□ -0.59
ITSN1-228ENST00000479424 VEGFBP49765 207 aa11.36□□□□□ -0.59
ITSN1-228ENST00000479424 EAPPQ56P03 285 aaPredicted RBP11.36□□□□□ -0.59
ITSN1-228ENST00000479424 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
ITSN1-228ENST00000479424 GPC2Q8N158 579 aa11.36□□□□□ -0.59
ITSN1-228ENST00000479424 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
ITSN1-228ENST00000479424 PROSER3Q2NL68 480 aa11.35□□□□□ -0.59
ITSN1-228ENST00000479424 MAP1SQ66K74 1059 aaPredicted RBP11.35□□□□□ -0.59
ITSN1-228ENST00000479424 KIF6Q6ZMV9 814 aa11.35□□□□□ -0.59
ITSN1-228ENST00000479424 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
ITSN1-228ENST00000479424 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
ITSN1-228ENST00000479424 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
ITSN1-228ENST00000479424 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
ITSN1-228ENST00000479424 SCNN1DP51172 638 aa11.34□□□□□ -0.59
ITSN1-228ENST00000479424 CC2D2BQ6DHV5 1058 aa11.34□□□□□ -0.59
ITSN1-228ENST00000479424 DDX60Q8IY21 1712 aaKnown RBP11.33□□□□□ -0.6
ITSN1-228ENST00000479424 PPEF1O14829 653 aaPredicted RBP11.33□□□□□ -0.6
ITSN1-228ENST00000479424 ANXA1P04083 346 aa11.33□□□□□ -0.6
ITSN1-228ENST00000479424 NEFMP07197 916 aa11.33□□□□□ -0.6
ITSN1-228ENST00000479424 EPS15P42566 896 aa11.33□□□□□ -0.6
ITSN1-228ENST00000479424 FMR1Q06787 632 aaKnown RBP eCLIP11.33□□□□□ -0.6
ITSN1-228ENST00000479424 SLC10A5Q5PT55 438 aa11.33□□□□□ -0.6
ITSN1-228ENST00000479424 PNMA8AQ86V59 439 aaPredicted RBP11.33□□□□□ -0.6
ITSN1-228ENST00000479424 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
ITSN1-228ENST00000479424 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
ITSN1-228ENST00000479424 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
ITSN1-228ENST00000479424 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
ITSN1-228ENST00000479424 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
ITSN1-228ENST00000479424 RASSF10A6NK89 507 aa11.32□□□□□ -0.6
ITSN1-228ENST00000479424 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
ITSN1-228ENST00000479424 JDP2Q8WYK2 163 aa11.32□□□□□ -0.6
ITSN1-228ENST00000479424 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
ITSN1-228ENST00000479424 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
ITSN1-228ENST00000479424 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
ITSN1-228ENST00000479424 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
ITSN1-228ENST00000479424 RIPK4P57078 832 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 PARP10Q53GL7 1025 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 PPP1R42Q7Z4L9 355 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 DDX21Q9NR30 783 aaKnown RBP eCLIP11.31□□□□□ -0.6
ITSN1-228ENST00000479424 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 ABCC4O15439 1325 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
ITSN1-228ENST00000479424 COL4A1P02462 1669 aa11.3□□□□□ -0.6
ITSN1-228ENST00000479424 DUOX1Q9NRD9 1551 aa11.3□□□□□ -0.6
ITSN1-228ENST00000479424 EIF6P56537 245 aaKnown RBP11.3□□□□□ -0.6
ITSN1-228ENST00000479424 AOC3Q16853 763 aa11.3□□□□□ -0.6
ITSN1-228ENST00000479424 KRT24Q2M2I5 525 aa11.3□□□□□ -0.6
ITSN1-228ENST00000479424 DEFB115Q30KQ5 88 aa11.3□□□□□ -0.6
ITSN1-228ENST00000479424 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
ITSN1-228ENST00000479424 UTP14AQ9BVJ6 771 aaKnown RBP11.3□□□□□ -0.6
ITSN1-228ENST00000479424 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-228ENST00000479424 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
ITSN1-228ENST00000479424 BABAM1Q9NWV8 329 aa11.3□□□□□ -0.6
ITSN1-228ENST00000479424 CST9Q5W186 159 aa11.29□□□□□ -0.6
ITSN1-228ENST00000479424 COPS6Q7L5N1 327 aa11.29□□□□□ -0.6
ITSN1-228ENST00000479424 NLRP10Q86W26 655 aa11.29□□□□□ -0.6
ITSN1-228ENST00000479424 WDR33Q9C0J8 1336 aaKnown RBP11.29□□□□□ -0.6
ITSN1-228ENST00000479424 TRAF5O00463 557 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 CHL1O00533 1208 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
ITSN1-228ENST00000479424 HCLS1P14317 486 aaPredicted RBP11.28□□□□□ -0.6
ITSN1-228ENST00000479424 CTCFP49711 727 aaPredicted RBP11.28□□□□□ -0.6
ITSN1-228ENST00000479424 LBX1P52954 281 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 CXCL9Q07325 125 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
ITSN1-228ENST00000479424 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 XAGE3Q8WTP9 111 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
ITSN1-228ENST00000479424 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
ITSN1-228ENST00000479424 CASP8AP2Q9UKL3 1982 aa11.27□□□□□ -0.61
ITSN1-228ENST00000479424 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
ITSN1-228ENST00000479424 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.61
ITSN1-228ENST00000479424 RALBP1Q15311 655 aa11.27□□□□□ -0.61
ITSN1-228ENST00000479424 SP8Q8IXZ3 490 aa11.27□□□□□ -0.61
ITSN1-228ENST00000479424 VPS33BQ9H267 617 aa11.27□□□□□ -0.61
ITSN1-228ENST00000479424 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
ITSN1-228ENST00000479424 YDJCA8MPS7 323 aa11.26□□□□□ -0.61
ITSN1-228ENST00000479424 BBOX1O75936 387 aa11.26□□□□□ -0.61
ITSN1-228ENST00000479424 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
ITSN1-228ENST00000479424 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
ITSN1-228ENST00000479424 AIDAQ96BJ3 306 aa11.26□□□□□ -0.61
ITSN1-228ENST00000479424 ADARB2Q9NS39 739 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms