RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 XAGE3Q8WTP9 111 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
CCDC78-210ENST00000478979 GRM8O00222 908 aa16.84■□□□□ 0.29
CCDC78-210ENST00000478979 LARGE1O95461 756 aa16.84■□□□□ 0.29
CCDC78-210ENST00000478979 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
CCDC78-210ENST00000478979 COPS6Q7L5N1 327 aa16.84■□□□□ 0.29
CCDC78-210ENST00000478979 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
CCDC78-210ENST00000478979 RIOK3O14730 519 aaKnown RBP16.84■□□□□ 0.29
CCDC78-210ENST00000478979 PDE4CQ08493 712 aa16.84■□□□□ 0.29
CCDC78-210ENST00000478979 G3BP1Q13283 466 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCDC78-210ENST00000478979 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
CCDC78-210ENST00000478979 RAD50Q92878 1312 aa16.84■□□□□ 0.29
CCDC78-210ENST00000478979 GLRX3O76003 335 aaKnown RBP16.83■□□□□ 0.28
CCDC78-210ENST00000478979 EAF2Q96CJ1 260 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-210ENST00000478979 KAZALD1Q96I82 304 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 ECHDC1Q9NTX5 307 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 HSP90AB4PQ58FF6 505 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 CCDC83Q8IWF9 413 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 ANKRD7Q92527 254 aa16.83■□□□□ 0.28
CCDC78-210ENST00000478979 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-210ENST00000478979 CHGBP05060 677 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 HOXB7P09629 217 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 HCLS1P14317 486 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-210ENST00000478979 ANAPC15P60006 121 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 ERBB3P21860 1342 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 MCM2P49736 904 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 EPHA10Q5JZY3 1008 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
CCDC78-210ENST00000478979 SASH1O94885 1247 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 USP48Q86UV5 1035 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-210ENST00000478979 TCHHQ07283 1943 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
CCDC78-210ENST00000478979 CHAF1AQ13111 956 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-210ENST00000478979 CUL4AQ13619 759 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 HYPKQ9NX55 129 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 PLCB2Q00722 1185 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 TMEM51Q9NW97 253 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 CNPY2Q9Y2B0 182 aa16.81■□□□□ 0.28
CCDC78-210ENST00000478979 ZNF771Q7L3S4 317 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-210ENST00000478979 LINS1Q8NG48 757 aa16.8■□□□□ 0.28
CCDC78-210ENST00000478979 FSD1Q9BTV5 496 aa16.8■□□□□ 0.28
CCDC78-210ENST00000478979 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
CCDC78-210ENST00000478979 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-210ENST00000478979 TUBGCP6Q96RT7 1819 aa16.8■□□□□ 0.28
CCDC78-210ENST00000478979 FIBPO43427 364 aa16.8■□□□□ 0.28
CCDC78-210ENST00000478979 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-210ENST00000478979 ATF3P18847 181 aa16.8■□□□□ 0.28
CCDC78-210ENST00000478979 GPATCH3Q96I76 525 aa16.8■□□□□ 0.28
CCDC78-210ENST00000478979 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC78-210ENST00000478979 PYCARDQ9ULZ3 195 aa16.8■□□□□ 0.28
CCDC78-210ENST00000478979 AOX1Q06278 1338 aa16.79■□□□□ 0.28
CCDC78-210ENST00000478979 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
CCDC78-210ENST00000478979 NMIQ13287 307 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-210ENST00000478979 PDIA6Q15084 440 aa16.79■□□□□ 0.28
CCDC78-210ENST00000478979 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
CCDC78-210ENST00000478979 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
CCDC78-210ENST00000478979 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
CCDC78-210ENST00000478979 ALDH1L1O75891 902 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 SMC3Q9UQE7 1217 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 VPS37CA5D8V6 355 aaPredicted RBP16.78■□□□□ 0.28
CCDC78-210ENST00000478979 KCNF1Q9H3M0 494 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 KDM3BQ7LBC6 1761 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 CTIFO43310 598 aaKnown RBP16.78■□□□□ 0.28
CCDC78-210ENST00000478979 KDM4AO75164 1064 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 STK3Q13188 491 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 TAF3Q5VWG9 929 aa16.78■□□□□ 0.28
CCDC78-210ENST00000478979 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
CCDC78-210ENST00000478979 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
CCDC78-210ENST00000478979 DNAJC2Q99543 621 aaKnown RBP16.77■□□□□ 0.28
CCDC78-210ENST00000478979 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.28
CCDC78-210ENST00000478979 FERMT3Q86UX7 667 aa16.77■□□□□ 0.27
CCDC78-210ENST00000478979 FEZ1Q99689 392 aa16.77■□□□□ 0.27
CCDC78-210ENST00000478979 RBM8AQ9Y5S9 174 aaKnown RBP16.77■□□□□ 0.27
CCDC78-210ENST00000478979 PHKG2P15735 406 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 SYT1P21579 422 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 INTS4Q96HW7 963 aaKnown RBP16.76■□□□□ 0.27
CCDC78-210ENST00000478979 C19orf44Q9H6X5 657 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 MED1Q15648 1581 aaPredicted RBP16.76■□□□□ 0.27
CCDC78-210ENST00000478979 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 OGFRQ9NZT2 677 aa16.76■□□□□ 0.27
CCDC78-210ENST00000478979 ZBTB22O15209 634 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 GJB2P29033 226 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 ANKRD13DQ6ZTN6 518 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 TTC14Q96N46 770 aa16.75■□□□□ 0.27
CCDC78-210ENST00000478979 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms