RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 POTEJP0CG39 1038 aa17.08■□□□□ 0.32
ABCF3-212ENST00000478288 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
ABCF3-212ENST00000478288 SYNE4Q8N205 404 aa17.08■□□□□ 0.32
ABCF3-212ENST00000478288 RPGRQ92834 1020 aaKnown RBP17.08■□□□□ 0.32
ABCF3-212ENST00000478288 CRAMP1Q96RY5 1269 aa17.08■□□□□ 0.32
ABCF3-212ENST00000478288 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
ABCF3-212ENST00000478288 RIPK4P57078 832 aa17.07■□□□□ 0.32
ABCF3-212ENST00000478288 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
ABCF3-212ENST00000478288 PPP1R42Q7Z4L9 355 aa17.07■□□□□ 0.32
ABCF3-212ENST00000478288 GPC2Q8N158 579 aa17.07■□□□□ 0.32
ABCF3-212ENST00000478288 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
ABCF3-212ENST00000478288 GPTP24298 496 aa17.06■□□□□ 0.32
ABCF3-212ENST00000478288 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
ABCF3-212ENST00000478288 PDIA6Q15084 440 aa17.06■□□□□ 0.32
ABCF3-212ENST00000478288 PNMA8AQ86V59 439 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-212ENST00000478288 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-212ENST00000478288 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
ABCF3-212ENST00000478288 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
ABCF3-212ENST00000478288 LAMB2P55268 1798 aa17.05■□□□□ 0.32
ABCF3-212ENST00000478288 COL4A5P29400 1685 aa17.04■□□□□ 0.32
ABCF3-212ENST00000478288 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
ABCF3-212ENST00000478288 HSPA1AP0DMV8 641 aaKnown RBP17.04■□□□□ 0.32
ABCF3-212ENST00000478288 HSPA1BP0DMV9 641 aaKnown RBP17.04■□□□□ 0.32
ABCF3-212ENST00000478288 EPHX2P34913 555 aa17.04■□□□□ 0.32
ABCF3-212ENST00000478288 SLC10A5Q5PT55 438 aa17.04■□□□□ 0.32
ABCF3-212ENST00000478288 CNTNAP1P78357 1384 aa17.03■□□□□ 0.32
ABCF3-212ENST00000478288 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-212ENST00000478288 ITGBL1O95965 494 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-212ENST00000478288 HSP90AB3PQ58FF7 597 aa17.03■□□□□ 0.32
ABCF3-212ENST00000478288 NLRP3Q96P20 1036 aa17.03■□□□□ 0.32
ABCF3-212ENST00000478288 UTP14AQ9BVJ6 771 aaKnown RBP17.03■□□□□ 0.32
ABCF3-212ENST00000478288 VPS33BQ9H267 617 aa17.03■□□□□ 0.32
ABCF3-212ENST00000478288 TMEM88BA6NKF7 163 aa17.01■□□□□ 0.31
ABCF3-212ENST00000478288 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
ABCF3-212ENST00000478288 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
ABCF3-212ENST00000478288 PROSER3Q2NL68 480 aa17.01■□□□□ 0.31
ABCF3-212ENST00000478288 EAPPQ56P03 285 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-212ENST00000478288 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
ABCF3-212ENST00000478288 CHL1O00533 1208 aa17■□□□□ 0.31
ABCF3-212ENST00000478288 HOXB7P09629 217 aa17■□□□□ 0.31
ABCF3-212ENST00000478288 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
ABCF3-212ENST00000478288 LARGE2Q8N3Y3 721 aa17■□□□□ 0.31
ABCF3-212ENST00000478288 TMX4Q9H1E5 349 aaPredicted RBP17■□□□□ 0.31
ABCF3-212ENST00000478288 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
ABCF3-212ENST00000478288 ATP6V0A2Q9Y487 856 aa17■□□□□ 0.31
ABCF3-212ENST00000478288 ABCC4O15439 1325 aa16.99■□□□□ 0.31
ABCF3-212ENST00000478288 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
ABCF3-212ENST00000478288 RTFDC1Q9BY42 306 aaPredicted RBP16.99■□□□□ 0.31
ABCF3-212ENST00000478288 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
ABCF3-212ENST00000478288 LMOD1P29536 600 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-212ENST00000478288 COPS6Q7L5N1 327 aa16.98■□□□□ 0.31
ABCF3-212ENST00000478288 NLRP10Q86W26 655 aa16.98■□□□□ 0.31
ABCF3-212ENST00000478288 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
ABCF3-212ENST00000478288 TRPM7Q96QT4 1865 aa16.98■□□□□ 0.31
ABCF3-212ENST00000478288 LRRC37AA6NMS7 1700 aa16.98■□□□□ 0.31
ABCF3-212ENST00000478288 DDX60Q8IY21 1712 aaKnown RBP16.97■□□□□ 0.31
ABCF3-212ENST00000478288 BBOX1O75936 387 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 ANXA1P04083 346 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 SCNN1DP51172 638 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 TCIRG1Q13488 830 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
ABCF3-212ENST00000478288 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.31
ABCF3-212ENST00000478288 PPIP5K2O43314 1243 aa16.96■□□□□ 0.31
ABCF3-212ENST00000478288 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
ABCF3-212ENST00000478288 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
ABCF3-212ENST00000478288 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
ABCF3-212ENST00000478288 MAP1SQ66K74 1059 aaPredicted RBP16.95■□□□□ 0.3
ABCF3-212ENST00000478288 USP50Q70EL3 339 aaPredicted RBP16.95■□□□□ 0.3
ABCF3-212ENST00000478288 TMC4Q7Z404 712 aa16.95■□□□□ 0.3
ABCF3-212ENST00000478288 SP8Q8IXZ3 490 aa16.95■□□□□ 0.3
ABCF3-212ENST00000478288 GJA3Q9Y6H8 435 aa16.95■□□□□ 0.3
ABCF3-212ENST00000478288 CDHR2Q9BYE9 1310 aa16.95■□□□□ 0.3
ABCF3-212ENST00000478288 AIMP1Q12904 312 aaKnown RBP16.94■□□□□ 0.3
ABCF3-212ENST00000478288 HDGFL1Q5TGJ6 251 aa16.94■□□□□ 0.3
ABCF3-212ENST00000478288 CCDC146Q8IYE0 955 aa16.94■□□□□ 0.3
ABCF3-212ENST00000478288 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
ABCF3-212ENST00000478288 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
ABCF3-212ENST00000478288 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
ABCF3-212ENST00000478288 ZNRF3Q9ULT6 936 aa16.94■□□□□ 0.3
ABCF3-212ENST00000478288 THSD7BQ9C0I4 1608 aa16.94■□□□□ 0.3
ABCF3-212ENST00000478288 TAF1P21675 1872 aa16.94■□□□□ 0.3
ABCF3-212ENST00000478288 VEGFBP49765 207 aa16.93■□□□□ 0.3
ABCF3-212ENST00000478288 GRAPQ13588 217 aa16.93■□□□□ 0.3
ABCF3-212ENST00000478288 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
ABCF3-212ENST00000478288 AOC3Q16853 763 aa16.93■□□□□ 0.3
ABCF3-212ENST00000478288 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
ABCF3-212ENST00000478288 SLC51AQ86UW1 340 aa16.93■□□□□ 0.3
ABCF3-212ENST00000478288 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
ABCF3-212ENST00000478288 GRAPLQ8TC17 118 aaPredicted RBP16.93■□□□□ 0.3
ABCF3-212ENST00000478288 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
ABCF3-212ENST00000478288 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
ABCF3-212ENST00000478288 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-212ENST00000478288 EPS15P42566 896 aa16.92■□□□□ 0.3
ABCF3-212ENST00000478288 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
ABCF3-212ENST00000478288 KRT24Q2M2I5 525 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms