RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PSMD1Q99460 953 aa14.92□□□□□ -0.02
HDLBP-236ENST00000477477 TAF1DQ9H5J8 278 aaPredicted RBP14.92□□□□□ -0.02
HDLBP-236ENST00000477477 PROSER3Q2NL68 480 aa14.91□□□□□ -0.02
HDLBP-236ENST00000477477 CC2D2BQ6DHV5 1058 aa14.91□□□□□ -0.02
HDLBP-236ENST00000477477 PPP1R42Q7Z4L9 355 aa14.91□□□□□ -0.02
HDLBP-236ENST00000477477 LDHDQ86WU2 507 aa14.91□□□□□ -0.02
HDLBP-236ENST00000477477 FZD9O00144 591 aa14.9□□□□□ -0.02
HDLBP-236ENST00000477477 ANXA1P04083 346 aa14.9□□□□□ -0.02
HDLBP-236ENST00000477477 CCDC146Q8IYE0 955 aa14.9□□□□□ -0.02
HDLBP-236ENST00000477477 RBM17Q96I25 401 aaKnown RBP14.9□□□□□ -0.02
HDLBP-236ENST00000477477 CRAMP1Q96RY5 1269 aa14.9□□□□□ -0.02
HDLBP-236ENST00000477477 C3orf67Q6ZVT6 689 aa14.89□□□□□ -0.03
HDLBP-236ENST00000477477 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
HDLBP-236ENST00000477477 HACL1Q9UJ83 578 aa14.89□□□□□ -0.03
HDLBP-236ENST00000477477 PCNTO95613 3336 aa14.89□□□□□ -0.03
HDLBP-236ENST00000477477 SCN4AP35499 1836 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 CHL1O00533 1208 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 PPEF1O14829 653 aaPredicted RBP14.88□□□□□ -0.03
HDLBP-236ENST00000477477 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDLBP-236ENST00000477477 NEUROD2Q15784 382 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 GRIPAP1Q4V328 841 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 SLC51AQ86UW1 340 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 JDP2Q8WYK2 163 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 NECTIN2Q92692 538 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 RUNDC1Q96C34 613 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 UTP14AQ9BVJ6 771 aaKnown RBP14.88□□□□□ -0.03
HDLBP-236ENST00000477477 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 PASKQ96RG2 1323 aa14.88□□□□□ -0.03
HDLBP-236ENST00000477477 COL4A5P29400 1685 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 EPHX2P34913 555 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 KRT24Q2M2I5 525 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 HSP90AB3PQ58FF7 597 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 SLC10A5Q5PT55 438 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 COPS6Q7L5N1 327 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 GPC2Q8N158 579 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 XAGE3Q8WTP9 111 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 NLRP3Q96P20 1036 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 DDX21Q9NR30 783 aaKnown RBP eCLIP14.87□□□□□ -0.03
HDLBP-236ENST00000477477 TRIM35Q9UPQ4 493 aa14.87□□□□□ -0.03
HDLBP-236ENST00000477477 HSPA1AP0DMV8 641 aaKnown RBP14.86□□□□□ -0.03
HDLBP-236ENST00000477477 HSPA1BP0DMV9 641 aaKnown RBP14.86□□□□□ -0.03
HDLBP-236ENST00000477477 AIMP1Q12904 312 aaKnown RBP14.86□□□□□ -0.03
HDLBP-236ENST00000477477 EAPPQ56P03 285 aaPredicted RBP14.86□□□□□ -0.03
HDLBP-236ENST00000477477 COL13A1Q5TAT6 717 aaPredicted RBP14.86□□□□□ -0.03
HDLBP-236ENST00000477477 TCERG1O14776 1098 aaKnown RBP14.85□□□□□ -0.03
HDLBP-236ENST00000477477 EIF6P56537 245 aaKnown RBP14.85□□□□□ -0.03
HDLBP-236ENST00000477477 PNMA8AQ86V59 439 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-236ENST00000477477 NLRP10Q86W26 655 aa14.85□□□□□ -0.03
HDLBP-236ENST00000477477 LARGE2Q8N3Y3 721 aa14.85□□□□□ -0.03
HDLBP-236ENST00000477477 ADAMTS8Q9UP79 889 aa14.85□□□□□ -0.03
HDLBP-236ENST00000477477 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
HDLBP-236ENST00000477477 ABCC4O15439 1325 aa14.85□□□□□ -0.03
HDLBP-236ENST00000477477 ADAMTSL1Q8N6G6 1762 aa14.84□□□□□ -0.03
HDLBP-236ENST00000477477 ITGBL1O95965 494 aaPredicted RBP14.84□□□□□ -0.03
HDLBP-236ENST00000477477 TCIRG1Q13488 830 aa14.84□□□□□ -0.03
HDLBP-236ENST00000477477 CHPF2Q9P2E5 772 aa14.84□□□□□ -0.03
HDLBP-236ENST00000477477 MKRN1Q9UHC7 482 aaKnown RBP14.84□□□□□ -0.03
HDLBP-236ENST00000477477 ATP6V0A2Q9Y487 856 aa14.84□□□□□ -0.03
HDLBP-236ENST00000477477 HOXB7P09629 217 aa14.83□□□□□ -0.04
HDLBP-236ENST00000477477 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.04
HDLBP-236ENST00000477477 TMX4Q9H1E5 349 aaPredicted RBP14.83□□□□□ -0.04
HDLBP-236ENST00000477477 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
HDLBP-236ENST00000477477 GJA3Q9Y6H8 435 aa14.83□□□□□ -0.04
HDLBP-236ENST00000477477 CNTNAP1P78357 1384 aa14.83□□□□□ -0.04
HDLBP-236ENST00000477477 PPIP5K2O43314 1243 aa14.82□□□□□ -0.04
HDLBP-236ENST00000477477 HCLS1P14317 486 aaPredicted RBP14.82□□□□□ -0.04
HDLBP-236ENST00000477477 NIM1KQ8IY84 436 aa14.82□□□□□ -0.04
HDLBP-236ENST00000477477 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
HDLBP-236ENST00000477477 TRMT112Q9UI30 125 aaKnown RBP14.82□□□□□ -0.04
HDLBP-236ENST00000477477 SH3TC1Q8TE82 1336 aa14.82□□□□□ -0.04
HDLBP-236ENST00000477477 ANKRD36CQ5JPF3 1778 aa14.82□□□□□ -0.04
HDLBP-236ENST00000477477 TMEM88BA6NKF7 163 aa14.81□□□□□ -0.04
HDLBP-236ENST00000477477 LMOD1P29536 600 aaPredicted RBP14.81□□□□□ -0.04
HDLBP-236ENST00000477477 SCNN1DP51172 638 aa14.81□□□□□ -0.04
HDLBP-236ENST00000477477 AOC3Q16853 763 aa14.81□□□□□ -0.04
HDLBP-236ENST00000477477 MAP1SQ66K74 1059 aaPredicted RBP14.81□□□□□ -0.04
HDLBP-236ENST00000477477 CNTROBQ8N137 903 aa14.81□□□□□ -0.04
HDLBP-236ENST00000477477 PLBD2Q8NHP8 589 aa14.81□□□□□ -0.04
HDLBP-236ENST00000477477 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
HDLBP-236ENST00000477477 RTFDC1Q9BY42 306 aaPredicted RBP14.81□□□□□ -0.04
HDLBP-236ENST00000477477 VPS33BQ9H267 617 aa14.81□□□□□ -0.04
HDLBP-236ENST00000477477 BBOX1O75936 387 aa14.8□□□□□ -0.04
HDLBP-236ENST00000477477 GRAPQ13588 217 aa14.8□□□□□ -0.04
HDLBP-236ENST00000477477 SUPT20HQ8NEM7 779 aa14.8□□□□□ -0.04
HDLBP-236ENST00000477477 GRAPLQ8TC17 118 aaPredicted RBP14.8□□□□□ -0.04
HDLBP-236ENST00000477477 DBF4Q9UBU7 674 aaPredicted RBP14.8□□□□□ -0.04
HDLBP-236ENST00000477477 LTBP1Q14766 1721 aa14.8□□□□□ -0.04
HDLBP-236ENST00000477477 EPS15P42566 896 aa14.79□□□□□ -0.04
HDLBP-236ENST00000477477 DUSP27Q5VZP5 1158 aa14.79□□□□□ -0.04
HDLBP-236ENST00000477477 DPP8Q6V1X1 898 aaPredicted RBP14.79□□□□□ -0.04
HDLBP-236ENST00000477477 DDX46Q7L014 1031 aaKnown RBP14.79□□□□□ -0.04
HDLBP-236ENST00000477477 SP8Q8IXZ3 490 aa14.79□□□□□ -0.04
HDLBP-236ENST00000477477 ISCA1Q9BUE6 129 aa14.79□□□□□ -0.04
HDLBP-236ENST00000477477 MBIPQ9NS73 344 aa14.79□□□□□ -0.04
HDLBP-236ENST00000477477 ZNF853P0CG23 659 aa14.78□□□□□ -0.04
HDLBP-236ENST00000477477 ANKRD13DQ6ZTN6 518 aa14.78□□□□□ -0.04
HDLBP-236ENST00000477477 TNS4Q8IZW8 715 aa14.78□□□□□ -0.04
HDLBP-236ENST00000477477 MPNDQ8N594 471 aa14.78□□□□□ -0.04
HDLBP-236ENST00000477477 HYPKQ9NX55 129 aa14.78□□□□□ -0.04
HDLBP-236ENST00000477477 ZNRF3Q9ULT6 936 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms