RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
SRSF3-203ENST00000477442 PCNTO95613 3336 aa17.19■□□□□ 0.34
SRSF3-203ENST00000477442 IBTKQ9P2D0 1353 aaPredicted RBP17.19■□□□□ 0.34
SRSF3-203ENST00000477442 IARSP41252 1262 aaKnown RBP17.19■□□□□ 0.34
SRSF3-203ENST00000477442 AIMP1Q12904 312 aaKnown RBP17.19■□□□□ 0.34
SRSF3-203ENST00000477442 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
SRSF3-203ENST00000477442 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
SRSF3-203ENST00000477442 TAF1DQ9H5J8 278 aaPredicted RBP17.19■□□□□ 0.34
SRSF3-203ENST00000477442 TRIM35Q9UPQ4 493 aa17.19■□□□□ 0.34
SRSF3-203ENST00000477442 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
SRSF3-203ENST00000477442 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
SRSF3-203ENST00000477442 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
SRSF3-203ENST00000477442 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
SRSF3-203ENST00000477442 RIC1Q4ADV7 1423 aa17.18■□□□□ 0.34
SRSF3-203ENST00000477442 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
SRSF3-203ENST00000477442 ADAMTS8Q9UP79 889 aa17.17■□□□□ 0.34
SRSF3-203ENST00000477442 FZD9O00144 591 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 CHL1O00533 1208 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
SRSF3-203ENST00000477442 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 PPP1R42Q7Z4L9 355 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 PSMD1Q99460 953 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
SRSF3-203ENST00000477442 IQCA1LA6NCM1 817 aa17.15■□□□□ 0.34
SRSF3-203ENST00000477442 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
SRSF3-203ENST00000477442 EAPPQ56P03 285 aaPredicted RBP17.15■□□□□ 0.34
SRSF3-203ENST00000477442 COL13A1Q5TAT6 717 aaPredicted RBP17.15■□□□□ 0.34
SRSF3-203ENST00000477442 RBM17Q96I25 401 aaKnown RBP17.15■□□□□ 0.34
SRSF3-203ENST00000477442 CRAMP1Q96RY5 1269 aa17.15■□□□□ 0.34
SRSF3-203ENST00000477442 UTP14AQ9BVJ6 771 aaKnown RBP17.15■□□□□ 0.34
SRSF3-203ENST00000477442 SCN4AP35499 1836 aa17.14■□□□□ 0.34
SRSF3-203ENST00000477442 LDHDQ86WU2 507 aa17.14■□□□□ 0.33
SRSF3-203ENST00000477442 CHPF2Q9P2E5 772 aa17.14■□□□□ 0.33
SRSF3-203ENST00000477442 MKRN1Q9UHC7 482 aaKnown RBP17.14■□□□□ 0.33
SRSF3-203ENST00000477442 HACL1Q9UJ83 578 aa17.14■□□□□ 0.33
SRSF3-203ENST00000477442 ANKRD36CQ5JPF3 1778 aa17.13■□□□□ 0.33
SRSF3-203ENST00000477442 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
SRSF3-203ENST00000477442 EPHX2P34913 555 aa17.13■□□□□ 0.33
SRSF3-203ENST00000477442 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
SRSF3-203ENST00000477442 NLRP10Q86W26 655 aa17.13■□□□□ 0.33
SRSF3-203ENST00000477442 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
SRSF3-203ENST00000477442 DDX21Q9NR30 783 aaKnown RBP eCLIP17.13■□□□□ 0.33
SRSF3-203ENST00000477442 GJA3Q9Y6H8 435 aa17.13■□□□□ 0.33
SRSF3-203ENST00000477442 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
SRSF3-203ENST00000477442 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
SRSF3-203ENST00000477442 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 JDP2Q8WYK2 163 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 CREBZFQ9NS37 354 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 ABCC4O15439 1325 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 PASKQ96RG2 1323 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 LAMB2P55268 1798 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
SRSF3-203ENST00000477442 LTBP1Q14766 1721 aa17.11■□□□□ 0.33
SRSF3-203ENST00000477442 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
SRSF3-203ENST00000477442 TCIRG1Q13488 830 aa17.11■□□□□ 0.33
SRSF3-203ENST00000477442 GPC2Q8N158 579 aa17.11■□□□□ 0.33
SRSF3-203ENST00000477442 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
SRSF3-203ENST00000477442 AOC3Q16853 763 aa17.1■□□□□ 0.33
SRSF3-203ENST00000477442 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
SRSF3-203ENST00000477442 MAP1SQ66K74 1059 aaPredicted RBP17.1■□□□□ 0.33
SRSF3-203ENST00000477442 TRMT112Q9UI30 125 aaKnown RBP17.1■□□□□ 0.33
SRSF3-203ENST00000477442 EIF6P56537 245 aaKnown RBP17.09■□□□□ 0.33
SRSF3-203ENST00000477442 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
SRSF3-203ENST00000477442 ATP6V0A2Q9Y487 856 aa17.09■□□□□ 0.33
SRSF3-203ENST00000477442 TAF1P21675 1872 aa17.09■□□□□ 0.33
SRSF3-203ENST00000477442 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
SRSF3-203ENST00000477442 EPS15P42566 896 aa17.08■□□□□ 0.32
SRSF3-203ENST00000477442 SCNN1DP51172 638 aa17.08■□□□□ 0.32
SRSF3-203ENST00000477442 DUSP27Q5VZP5 1158 aa17.08■□□□□ 0.32
SRSF3-203ENST00000477442 MBIPQ9NS73 344 aa17.08■□□□□ 0.32
SRSF3-203ENST00000477442 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
SRSF3-203ENST00000477442 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
SRSF3-203ENST00000477442 APAF1O14727 1248 aa17.07■□□□□ 0.32
SRSF3-203ENST00000477442 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
SRSF3-203ENST00000477442 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
SRSF3-203ENST00000477442 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
SRSF3-203ENST00000477442 CNTNAP1P78357 1384 aa17.06■□□□□ 0.32
SRSF3-203ENST00000477442 RTL5Q5HYW3 569 aaPredicted RBP17.06■□□□□ 0.32
SRSF3-203ENST00000477442 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
SRSF3-203ENST00000477442 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
SRSF3-203ENST00000477442 FAM89AQ96GI7 184 aa17.06■□□□□ 0.32
SRSF3-203ENST00000477442 COL4A1P02462 1669 aa17.06■□□□□ 0.32
SRSF3-203ENST00000477442 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
SRSF3-203ENST00000477442 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
SRSF3-203ENST00000477442 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
SRSF3-203ENST00000477442 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
SRSF3-203ENST00000477442 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
SRSF3-203ENST00000477442 ISCA1Q9BUE6 129 aa17.05■□□□□ 0.32
SRSF3-203ENST00000477442 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
SRSF3-203ENST00000477442 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
SRSF3-203ENST00000477442 BBOX1O75936 387 aa17.04■□□□□ 0.32
SRSF3-203ENST00000477442 HOXB7P09629 217 aa17.04■□□□□ 0.32
SRSF3-203ENST00000477442 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
SRSF3-203ENST00000477442 LMOD1P29536 600 aaPredicted RBP17.04■□□□□ 0.32
SRSF3-203ENST00000477442 GRAPQ13588 217 aa17.04■□□□□ 0.32
SRSF3-203ENST00000477442 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms