RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 COL4A5P29400 1685 aa13.82□□□□□ -0.2
PGK1-203ENST00000476531 LAMB4A4D0S4 1761 aa13.82□□□□□ -0.2
PGK1-203ENST00000476531 CLEC11AQ9Y240 323 aa13.82□□□□□ -0.2
PGK1-203ENST00000476531 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
PGK1-203ENST00000476531 MAP1SQ66K74 1059 aaPredicted RBP13.81□□□□□ -0.2
PGK1-203ENST00000476531 NUTM1Q86Y26 1132 aa13.81□□□□□ -0.2
PGK1-203ENST00000476531 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
PGK1-203ENST00000476531 GPC2Q8N158 579 aa13.81□□□□□ -0.2
PGK1-203ENST00000476531 WBP1LQ9NX94 342 aa13.81□□□□□ -0.2
PGK1-203ENST00000476531 RASSF10A6NK89 507 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
PGK1-203ENST00000476531 CTCFP49711 727 aaPredicted RBP13.8□□□□□ -0.2
PGK1-203ENST00000476531 HNRNPUQ00839 825 aaKnown RBP eCLIP13.8□□□□□ -0.2
PGK1-203ENST00000476531 TTLL7Q6ZT98 887 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 SLC51AQ86UW1 340 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 PNMA8AQ86V59 439 aaPredicted RBP13.8□□□□□ -0.2
PGK1-203ENST00000476531 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 MAP3K15Q6ZN16 1313 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 RIC1Q4ADV7 1423 aa13.8□□□□□ -0.2
PGK1-203ENST00000476531 LTBP1Q14766 1721 aa13.79□□□□□ -0.2
PGK1-203ENST00000476531 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
PGK1-203ENST00000476531 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
PGK1-203ENST00000476531 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
PGK1-203ENST00000476531 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
PGK1-203ENST00000476531 IBTKQ9P2D0 1353 aaPredicted RBP13.79□□□□□ -0.2
PGK1-203ENST00000476531 EIF4A1P60842 406 aaKnown RBP13.78□□□□□ -0.2
PGK1-203ENST00000476531 DEFB115Q30KQ5 88 aa13.78□□□□□ -0.2
PGK1-203ENST00000476531 SUSD4Q5VX71 490 aa13.78□□□□□ -0.2
PGK1-203ENST00000476531 JDP2Q8WYK2 163 aa13.78□□□□□ -0.2
PGK1-203ENST00000476531 GPTP24298 496 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 NUP98P52948 1817 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 LBX1P52954 281 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 EIF6P56537 245 aaKnown RBP13.77□□□□□ -0.21
PGK1-203ENST00000476531 KIF6Q6ZMV9 814 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 ZNF34Q8IZ26 560 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 PLEKHF1Q96S99 279 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 ZBTB3Q9H5J0 574 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.21
PGK1-203ENST00000476531 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
PGK1-203ENST00000476531 WDR33Q9C0J8 1336 aaKnown RBP13.76□□□□□ -0.21
PGK1-203ENST00000476531 NTSR2O95665 410 aa13.76□□□□□ -0.21
PGK1-203ENST00000476531 HSPA8P11142 646 aaKnown RBP13.76□□□□□ -0.21
PGK1-203ENST00000476531 MYL6BP14649 208 aa13.76□□□□□ -0.21
PGK1-203ENST00000476531 EPS15P42566 896 aa13.76□□□□□ -0.21
PGK1-203ENST00000476531 SCNN1DP51172 638 aa13.76□□□□□ -0.21
PGK1-203ENST00000476531 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
PGK1-203ENST00000476531 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
PGK1-203ENST00000476531 CRAMP1Q96RY5 1269 aa13.76□□□□□ -0.21
PGK1-203ENST00000476531 THUMPD2Q9BTF0 503 aaKnown RBP13.76□□□□□ -0.21
PGK1-203ENST00000476531 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
PGK1-203ENST00000476531 SALL2Q9Y467 1007 aaPredicted RBP13.76□□□□□ -0.21
PGK1-203ENST00000476531 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
PGK1-203ENST00000476531 FAM161AQ3B820 660 aa13.75□□□□□ -0.21
PGK1-203ENST00000476531 GRIPAP1Q4V328 841 aa13.75□□□□□ -0.21
PGK1-203ENST00000476531 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
PGK1-203ENST00000476531 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
PGK1-203ENST00000476531 DLG5Q8TDM6 1919 aa13.74□□□□□ -0.21
PGK1-203ENST00000476531 LMOD1P29536 600 aaPredicted RBP13.74□□□□□ -0.21
PGK1-203ENST00000476531 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
PGK1-203ENST00000476531 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
PGK1-203ENST00000476531 LRP10Q7Z4F1 713 aa13.74□□□□□ -0.21
PGK1-203ENST00000476531 ABHD8Q96I13 439 aa13.74□□□□□ -0.21
PGK1-203ENST00000476531 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
PGK1-203ENST00000476531 ABT1Q9ULW3 272 aaKnown RBP13.74□□□□□ -0.21
PGK1-203ENST00000476531 THSD7BQ9C0I4 1608 aa13.74□□□□□ -0.21
PGK1-203ENST00000476531 ERBB4Q15303 1308 aa13.73□□□□□ -0.21
PGK1-203ENST00000476531 APAF1O14727 1248 aa13.73□□□□□ -0.21
PGK1-203ENST00000476531 TCERG1O14776 1098 aaKnown RBP13.73□□□□□ -0.21
PGK1-203ENST00000476531 MAP2K1Q02750 393 aaPredicted RBP13.73□□□□□ -0.21
PGK1-203ENST00000476531 PDIA6Q15084 440 aa13.72□□□□□ -0.21
PGK1-203ENST00000476531 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
PGK1-203ENST00000476531 CST9Q5W186 159 aa13.72□□□□□ -0.21
PGK1-203ENST00000476531 USP50Q70EL3 339 aaPredicted RBP13.72□□□□□ -0.21
PGK1-203ENST00000476531 NIM1KQ8IY84 436 aa13.72□□□□□ -0.21
PGK1-203ENST00000476531 RUNDC1Q96C34 613 aa13.72□□□□□ -0.21
PGK1-203ENST00000476531 TRAF5O00463 557 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 PPIP5K2O43314 1243 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 NEFMP07197 916 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 AOC3Q16853 763 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 SLC10A5Q5PT55 438 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 ATP6V0A2Q9Y487 856 aa13.71□□□□□ -0.21
PGK1-203ENST00000476531 ABCC4O15439 1325 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 MLLT1Q03111 559 aaPredicted RBP13.7□□□□□ -0.22
PGK1-203ENST00000476531 PROSER3Q2NL68 480 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 CYP4F22Q6NT55 531 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 NLRP3Q96P20 1036 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
PGK1-203ENST00000476531 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
PGK1-203ENST00000476531 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 GPRC5DQ9NZD1 345 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 TLL2Q9Y6L7 1015 aa13.7□□□□□ -0.22
PGK1-203ENST00000476531 RGS19P49795 217 aa13.69□□□□□ -0.22
PGK1-203ENST00000476531 CXCL9Q07325 125 aa13.69□□□□□ -0.22
PGK1-203ENST00000476531 ADARB2Q9NS39 739 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms