RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
CDRT1-205ENST00000475944 UBN2Q6ZU65 1347 aa14.28□□□□□ -0.12
CDRT1-205ENST00000475944 GPC2Q8N158 579 aa14.28□□□□□ -0.12
CDRT1-205ENST00000475944 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
CDRT1-205ENST00000475944 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
CDRT1-205ENST00000475944 RNF123Q5XPI4 1314 aa14.27□□□□□ -0.12
CDRT1-205ENST00000475944 TMEM88BA6NKF7 163 aa14.27□□□□□ -0.13
CDRT1-205ENST00000475944 HOXA10P31260 410 aaPredicted RBP14.27□□□□□ -0.13
CDRT1-205ENST00000475944 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
CDRT1-205ENST00000475944 PPP1R42Q7Z4L9 355 aa14.27□□□□□ -0.13
CDRT1-205ENST00000475944 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.13
CDRT1-205ENST00000475944 TSPYL4Q9UJ04 414 aa14.27□□□□□ -0.13
CDRT1-205ENST00000475944 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.13
CDRT1-205ENST00000475944 CAPN15O75808 1086 aa14.26□□□□□ -0.13
CDRT1-205ENST00000475944 ITGBL1O95965 494 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-205ENST00000475944 EIF6P56537 245 aaKnown RBP14.26□□□□□ -0.13
CDRT1-205ENST00000475944 PARP10Q53GL7 1025 aa14.26□□□□□ -0.13
CDRT1-205ENST00000475944 SUSD4Q5VX71 490 aa14.26□□□□□ -0.13
CDRT1-205ENST00000475944 ZNF34Q8IZ26 560 aa14.26□□□□□ -0.13
CDRT1-205ENST00000475944 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
CDRT1-205ENST00000475944 PCNTO95613 3336 aa14.25□□□□□ -0.13
CDRT1-205ENST00000475944 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
CDRT1-205ENST00000475944 NTSR2O95665 410 aa14.25□□□□□ -0.13
CDRT1-205ENST00000475944 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
CDRT1-205ENST00000475944 LMOD3Q0VAK6 560 aa14.24□□□□□ -0.13
CDRT1-205ENST00000475944 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
CDRT1-205ENST00000475944 LARGE2Q8N3Y3 721 aa14.24□□□□□ -0.13
CDRT1-205ENST00000475944 NLRP3Q96P20 1036 aa14.24□□□□□ -0.13
CDRT1-205ENST00000475944 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
CDRT1-205ENST00000475944 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
CDRT1-205ENST00000475944 GJA3Q9Y6H8 435 aa14.24□□□□□ -0.13
CDRT1-205ENST00000475944 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
CDRT1-205ENST00000475944 RIPK4P57078 832 aa14.23□□□□□ -0.13
CDRT1-205ENST00000475944 VEGFBP49765 207 aa14.22□□□□□ -0.13
CDRT1-205ENST00000475944 MAP1SQ66K74 1059 aaPredicted RBP14.22□□□□□ -0.13
CDRT1-205ENST00000475944 LRP10Q7Z4F1 713 aa14.22□□□□□ -0.13
CDRT1-205ENST00000475944 NIM1KQ8IY84 436 aa14.22□□□□□ -0.13
CDRT1-205ENST00000475944 AIDAQ96BJ3 306 aa14.22□□□□□ -0.13
CDRT1-205ENST00000475944 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
CDRT1-205ENST00000475944 COL4A5P29400 1685 aa14.22□□□□□ -0.13
CDRT1-205ENST00000475944 TCERG1O14776 1098 aaKnown RBP14.21□□□□□ -0.13
CDRT1-205ENST00000475944 FOXN1O15353 648 aa14.21□□□□□ -0.13
CDRT1-205ENST00000475944 PDIA6Q15084 440 aa14.21□□□□□ -0.13
CDRT1-205ENST00000475944 RALBP1Q15311 655 aa14.21□□□□□ -0.13
CDRT1-205ENST00000475944 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.13
CDRT1-205ENST00000475944 VPS33BQ9H267 617 aa14.21□□□□□ -0.13
CDRT1-205ENST00000475944 RASSF10A6NK89 507 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 PPIP5K2O43314 1243 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
CDRT1-205ENST00000475944 SCNN1DP51172 638 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 DEFB115Q30KQ5 88 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 SLC10A5Q5PT55 438 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 C3orf67Q6ZVT6 689 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 SUPT20HQ8NEM7 779 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 PRDM10Q9NQV6 1147 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 ATP6V0A2Q9Y487 856 aa14.2□□□□□ -0.14
CDRT1-205ENST00000475944 LTBP1Q14766 1721 aa14.19□□□□□ -0.14
CDRT1-205ENST00000475944 CTCFP49711 727 aaPredicted RBP14.19□□□□□ -0.14
CDRT1-205ENST00000475944 PROSER3Q2NL68 480 aa14.19□□□□□ -0.14
CDRT1-205ENST00000475944 USP50Q70EL3 339 aaPredicted RBP14.19□□□□□ -0.14
CDRT1-205ENST00000475944 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDRT1-205ENST00000475944 ABT1Q9ULW3 272 aaKnown RBP14.19□□□□□ -0.14
CDRT1-205ENST00000475944 ANKRD36CQ5JPF3 1778 aa14.19□□□□□ -0.14
CDRT1-205ENST00000475944 ABCC4O15439 1325 aa14.18□□□□□ -0.14
CDRT1-205ENST00000475944 ANXA1P04083 346 aa14.18□□□□□ -0.14
CDRT1-205ENST00000475944 EPS15P42566 896 aa14.18□□□□□ -0.14
CDRT1-205ENST00000475944 AIMP1Q12904 312 aaKnown RBP14.18□□□□□ -0.14
CDRT1-205ENST00000475944 AOC3Q16853 763 aa14.18□□□□□ -0.14
CDRT1-205ENST00000475944 COPS6Q7L5N1 327 aa14.18□□□□□ -0.14
CDRT1-205ENST00000475944 SLC51AQ86UW1 340 aa14.18□□□□□ -0.14
CDRT1-205ENST00000475944 BBOX1O75936 387 aa14.17□□□□□ -0.14
CDRT1-205ENST00000475944 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
CDRT1-205ENST00000475944 XAGE3Q8WTP9 111 aa14.17□□□□□ -0.14
CDRT1-205ENST00000475944 NECTIN2Q92692 538 aa14.17□□□□□ -0.14
CDRT1-205ENST00000475944 RTFDC1Q9BY42 306 aaPredicted RBP14.17□□□□□ -0.14
CDRT1-205ENST00000475944 WBP1LQ9NX94 342 aa14.17□□□□□ -0.14
CDRT1-205ENST00000475944 MAP2K1Q02750 393 aaPredicted RBP14.16□□□□□ -0.14
CDRT1-205ENST00000475944 TCIRG1Q13488 830 aa14.16□□□□□ -0.14
CDRT1-205ENST00000475944 DPP8Q6V1X1 898 aaPredicted RBP14.16□□□□□ -0.14
CDRT1-205ENST00000475944 DDX46Q7L014 1031 aaKnown RBP14.16□□□□□ -0.14
CDRT1-205ENST00000475944 SP8Q8IXZ3 490 aa14.16□□□□□ -0.14
CDRT1-205ENST00000475944 ADARB2Q9NS39 739 aaKnown RBP14.16□□□□□ -0.14
CDRT1-205ENST00000475944 GPRC5DQ9NZD1 345 aa14.16□□□□□ -0.14
CDRT1-205ENST00000475944 TRMT112Q9UI30 125 aaKnown RBP14.16□□□□□ -0.14
CDRT1-205ENST00000475944 ZNRF3Q9ULT6 936 aa14.16□□□□□ -0.14
CDRT1-205ENST00000475944 LAMB2P55268 1798 aa14.16□□□□□ -0.14
CDRT1-205ENST00000475944 SH3TC1Q8TE82 1336 aa14.15□□□□□ -0.14
CDRT1-205ENST00000475944 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.14
CDRT1-205ENST00000475944 WDR33Q9C0J8 1336 aaKnown RBP14.15□□□□□ -0.14
CDRT1-205ENST00000475944 HCLS1P14317 486 aaPredicted RBP14.15□□□□□ -0.14
CDRT1-205ENST00000475944 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
CDRT1-205ENST00000475944 MPNDQ8N594 471 aa14.15□□□□□ -0.14
CDRT1-205ENST00000475944 CDHR2Q9BYE9 1310 aa14.15□□□□□ -0.15
CDRT1-205ENST00000475944 CHL1O00533 1208 aa14.14□□□□□ -0.15
CDRT1-205ENST00000475944 ECE1P42892 770 aa14.14□□□□□ -0.15
CDRT1-205ENST00000475944 CXCL9Q07325 125 aa14.14□□□□□ -0.15
CDRT1-205ENST00000475944 KIAA2012Q0VF49 1180 aa14.14□□□□□ -0.15
CDRT1-205ENST00000475944 GRAPQ13588 217 aa14.14□□□□□ -0.15
CDRT1-205ENST00000475944 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDRT1-205ENST00000475944 TMC4Q7Z404 712 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms