RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 GJA3Q9Y6H8 435 aa18.53■□□□□ 0.56
CCDC78-209ENST00000474647 FZD9O00144 591 aa18.52■□□□□ 0.56
CCDC78-209ENST00000474647 ITGBL1O95965 494 aaPredicted RBP18.52■□□□□ 0.56
CCDC78-209ENST00000474647 VEGFBP49765 207 aa18.52■□□□□ 0.56
CCDC78-209ENST00000474647 CRY2Q49AN0 593 aa18.52■□□□□ 0.56
CCDC78-209ENST00000474647 MAP1SQ66K74 1059 aaPredicted RBP18.52■□□□□ 0.56
CCDC78-209ENST00000474647 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
CCDC78-209ENST00000474647 GPC2Q8N158 579 aa18.52■□□□□ 0.56
CCDC78-209ENST00000474647 PSMD1Q99460 953 aa18.52■□□□□ 0.56
CCDC78-209ENST00000474647 THUMPD2Q9BTF0 503 aaKnown RBP18.52■□□□□ 0.56
CCDC78-209ENST00000474647 UBN2Q6ZU65 1347 aa18.51■□□□□ 0.55
CCDC78-209ENST00000474647 RIC1Q4ADV7 1423 aa18.51■□□□□ 0.55
CCDC78-209ENST00000474647 ERVV-1B6SEH8 477 aa18.51■□□□□ 0.55
CCDC78-209ENST00000474647 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
CCDC78-209ENST00000474647 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
CCDC78-209ENST00000474647 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
CCDC78-209ENST00000474647 MAPK8IP3Q9UPT6 1336 aa18.5■□□□□ 0.55
CCDC78-209ENST00000474647 LMOD1P29536 600 aaPredicted RBP18.5■□□□□ 0.55
CCDC78-209ENST00000474647 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
CCDC78-209ENST00000474647 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
CCDC78-209ENST00000474647 THSD7BQ9C0I4 1608 aa18.49■□□□□ 0.55
CCDC78-209ENST00000474647 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
CCDC78-209ENST00000474647 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
CCDC78-209ENST00000474647 SUSD4Q5VX71 490 aa18.48■□□□□ 0.55
CCDC78-209ENST00000474647 CC2D2BQ6DHV5 1058 aa18.48■□□□□ 0.55
CCDC78-209ENST00000474647 SLC51AQ86UW1 340 aa18.48■□□□□ 0.55
CCDC78-209ENST00000474647 LARGE2Q8N3Y3 721 aa18.48■□□□□ 0.55
CCDC78-209ENST00000474647 RBM17Q96I25 401 aaKnown RBP18.48■□□□□ 0.55
CCDC78-209ENST00000474647 DDX60Q8IY21 1712 aaKnown RBP18.47■□□□□ 0.55
CCDC78-209ENST00000474647 CTCFP49711 727 aaPredicted RBP18.47■□□□□ 0.55
CCDC78-209ENST00000474647 PLEKHF1Q96S99 279 aa18.47■□□□□ 0.55
CCDC78-209ENST00000474647 ABT1Q9ULW3 272 aaKnown RBP18.47■□□□□ 0.55
CCDC78-209ENST00000474647 NTSR2O95665 410 aa18.46■□□□□ 0.55
CCDC78-209ENST00000474647 HOXA10P31260 410 aaPredicted RBP18.46■□□□□ 0.55
CCDC78-209ENST00000474647 DEFB115Q30KQ5 88 aa18.46■□□□□ 0.55
CCDC78-209ENST00000474647 RASSF10A6NK89 507 aa18.45■□□□□ 0.54
CCDC78-209ENST00000474647 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
CCDC78-209ENST00000474647 PAXIP1Q6ZW49 1069 aaPredicted RBP18.45■□□□□ 0.54
CCDC78-209ENST00000474647 PPP1R42Q7Z4L9 355 aa18.45■□□□□ 0.54
CCDC78-209ENST00000474647 NIM1KQ8IY84 436 aa18.45■□□□□ 0.54
CCDC78-209ENST00000474647 ZNF34Q8IZ26 560 aa18.45■□□□□ 0.54
CCDC78-209ENST00000474647 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
CCDC78-209ENST00000474647 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
CCDC78-209ENST00000474647 SCNN1DP51172 638 aa18.44■□□□□ 0.54
CCDC78-209ENST00000474647 LBX1P52954 281 aa18.44■□□□□ 0.54
CCDC78-209ENST00000474647 GRIPAP1Q4V328 841 aa18.44■□□□□ 0.54
CCDC78-209ENST00000474647 GIGYF2Q6Y7W6 1299 aaKnown RBP18.44■□□□□ 0.54
CCDC78-209ENST00000474647 CRAMP1Q96RY5 1269 aa18.44■□□□□ 0.54
CCDC78-209ENST00000474647 TMX4Q9H1E5 349 aaPredicted RBP18.44■□□□□ 0.54
CCDC78-209ENST00000474647 POLR2AP24928 1970 aaKnown RBP18.44■□□□□ 0.54
CCDC78-209ENST00000474647 ERBB4Q15303 1308 aa18.44■□□□□ 0.54
CCDC78-209ENST00000474647 WDR33Q9C0J8 1336 aaKnown RBP18.44■□□□□ 0.54
CCDC78-209ENST00000474647 LRRC37AA6NMS7 1700 aa18.43■□□□□ 0.54
CCDC78-209ENST00000474647 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
CCDC78-209ENST00000474647 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
CCDC78-209ENST00000474647 EPS15P42566 896 aa18.43■□□□□ 0.54
CCDC78-209ENST00000474647 GRM1Q13255 1194 aa18.43■□□□□ 0.54
CCDC78-209ENST00000474647 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
CCDC78-209ENST00000474647 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
CCDC78-209ENST00000474647 WBP1LQ9NX94 342 aa18.43■□□□□ 0.54
CCDC78-209ENST00000474647 FMR1Q06787 632 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC78-209ENST00000474647 AOC3Q16853 763 aa18.42■□□□□ 0.54
CCDC78-209ENST00000474647 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
CCDC78-209ENST00000474647 NLRP3Q96P20 1036 aa18.42■□□□□ 0.54
CCDC78-209ENST00000474647 ANXA1P04083 346 aa18.41■□□□□ 0.54
CCDC78-209ENST00000474647 ABCC4O15439 1325 aa18.41■□□□□ 0.54
CCDC78-209ENST00000474647 PROSER3Q2NL68 480 aa18.4■□□□□ 0.54
CCDC78-209ENST00000474647 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
CCDC78-209ENST00000474647 UTP14AQ9BVJ6 771 aaKnown RBP18.4■□□□□ 0.54
CCDC78-209ENST00000474647 CASP8AP2Q9UKL3 1982 aa18.4■□□□□ 0.54
CCDC78-209ENST00000474647 TRAF5O00463 557 aa18.39■□□□□ 0.53
CCDC78-209ENST00000474647 HSPA8P11142 646 aaKnown RBP18.39■□□□□ 0.53
CCDC78-209ENST00000474647 MAP2K1Q02750 393 aaPredicted RBP18.39■□□□□ 0.53
CCDC78-209ENST00000474647 USP50Q70EL3 339 aaPredicted RBP18.39■□□□□ 0.53
CCDC78-209ENST00000474647 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
CCDC78-209ENST00000474647 RIPK4P57078 832 aa18.38■□□□□ 0.53
CCDC78-209ENST00000474647 CAPNS2Q96L46 248 aa18.38■□□□□ 0.53
CCDC78-209ENST00000474647 AIMP1Q12904 312 aaKnown RBP18.37■□□□□ 0.53
CCDC78-209ENST00000474647 PDIA6Q15084 440 aa18.37■□□□□ 0.53
CCDC78-209ENST00000474647 CYP4F22Q6NT55 531 aa18.37■□□□□ 0.53
CCDC78-209ENST00000474647 LRP10Q7Z4F1 713 aa18.37■□□□□ 0.53
CCDC78-209ENST00000474647 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
CCDC78-209ENST00000474647 GPRC5DQ9NZD1 345 aa18.37■□□□□ 0.53
CCDC78-209ENST00000474647 DUOX1Q9NRD9 1551 aa18.37■□□□□ 0.53
CCDC78-209ENST00000474647 ECE1P42892 770 aa18.36■□□□□ 0.53
CCDC78-209ENST00000474647 DPP8Q6V1X1 898 aaPredicted RBP18.36■□□□□ 0.53
CCDC78-209ENST00000474647 ZNF428Q96B54 188 aa18.36■□□□□ 0.53
CCDC78-209ENST00000474647 BEGAINQ9BUH8 593 aa18.36■□□□□ 0.53
CCDC78-209ENST00000474647 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
CCDC78-209ENST00000474647 HCLS1P14317 486 aaPredicted RBP18.35■□□□□ 0.53
CCDC78-209ENST00000474647 GMPSP49915 693 aaPredicted RBP18.35■□□□□ 0.53
CCDC78-209ENST00000474647 CXCL9Q07325 125 aa18.35■□□□□ 0.53
CCDC78-209ENST00000474647 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
CCDC78-209ENST00000474647 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
CCDC78-209ENST00000474647 ZNRF3Q9ULT6 936 aa18.35■□□□□ 0.53
CCDC78-209ENST00000474647 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
CCDC78-209ENST00000474647 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
CCDC78-209ENST00000474647 SLC10A5Q5PT55 438 aa18.34■□□□□ 0.53
CCDC78-209ENST00000474647 CST9Q5W186 159 aa18.34■□□□□ 0.53
CCDC78-209ENST00000474647 MPNDQ8N594 471 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms