RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
VPS50-211ENST00000474412 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
VPS50-211ENST00000474412 SLC26A8Q96RN1 970 aa10.5□□□□□ -0.73
VPS50-211ENST00000474412 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
VPS50-211ENST00000474412 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
VPS50-211ENST00000474412 FNBP4Q8N3X1 1017 aaPredicted RBP10.49□□□□□ -0.73
VPS50-211ENST00000474412 RNF217Q8TC41 542 aa10.49□□□□□ -0.73
VPS50-211ENST00000474412 SLC52A1Q9NWF4 448 aa10.49□□□□□ -0.73
VPS50-211ENST00000474412 WFS1O76024 890 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 GNRH1P01148 92 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 PIP4K2BP78356 416 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 ADAMTS19Q8TE59 1207 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 EID1Q9Y6B2 187 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 TMEM94Q12767 1356 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 PTPRUQ92729 1446 aa10.48□□□□□ -0.73
VPS50-211ENST00000474412 VEGFBP49765 207 aa10.47□□□□□ -0.73
VPS50-211ENST00000474412 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
VPS50-211ENST00000474412 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
VPS50-211ENST00000474412 KNDC1Q76NI1 1749 aa10.47□□□□□ -0.73
VPS50-211ENST00000474412 CLN3Q13286 438 aa10.46□□□□□ -0.73
VPS50-211ENST00000474412 EML3Q32P44 896 aa10.46□□□□□ -0.73
VPS50-211ENST00000474412 NFATC2IPQ8NCF5 419 aa10.46□□□□□ -0.73
VPS50-211ENST00000474412 GLMNQ92990 594 aa10.46□□□□□ -0.73
VPS50-211ENST00000474412 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.73
VPS50-211ENST00000474412 ASXL1Q8IXJ9 1541 aa10.46□□□□□ -0.74
VPS50-211ENST00000474412 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
VPS50-211ENST00000474412 HSPA1LP34931 641 aa10.45□□□□□ -0.74
VPS50-211ENST00000474412 RNF144AP50876 292 aaPredicted RBP10.45□□□□□ -0.74
VPS50-211ENST00000474412 PTSQ03393 145 aa10.45□□□□□ -0.74
VPS50-211ENST00000474412 NFX1Q12986 1120 aaKnown RBP10.45□□□□□ -0.74
VPS50-211ENST00000474412 SLC27A3Q5K4L6 730 aa10.45□□□□□ -0.74
VPS50-211ENST00000474412 LYSMD3Q7Z3D4 306 aa10.45□□□□□ -0.74
VPS50-211ENST00000474412 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
VPS50-211ENST00000474412 DISP3Q9P2K9 1392 aa10.44□□□□□ -0.74
VPS50-211ENST00000474412 USP17L5A8MUK1 530 aa10.44□□□□□ -0.74
VPS50-211ENST00000474412 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
VPS50-211ENST00000474412 GPC1P35052 558 aa10.44□□□□□ -0.74
VPS50-211ENST00000474412 ESCO1Q5FWF5 840 aa10.44□□□□□ -0.74
VPS50-211ENST00000474412 PRICKLE2Q7Z3G6 844 aa10.44□□□□□ -0.74
VPS50-211ENST00000474412 DEPDC4Q8N2C3 294 aa10.43□□□□□ -0.74
VPS50-211ENST00000474412 CNKSR1Q969H4 720 aa10.43□□□□□ -0.74
VPS50-211ENST00000474412 CALR3Q96L12 384 aaKnown RBP10.43□□□□□ -0.74
VPS50-211ENST00000474412 RGPD8O14715 1765 aaPredicted RBP10.42□□□□□ -0.74
VPS50-211ENST00000474412 SHPRHQ149N8 1683 aa10.42□□□□□ -0.74
VPS50-211ENST00000474412 H3BM21 787 aa10.42□□□□□ -0.74
VPS50-211ENST00000474412 NCOA4Q13772 614 aa10.42□□□□□ -0.74
VPS50-211ENST00000474412 UCN2Q96RP3 112 aa10.42□□□□□ -0.74
VPS50-211ENST00000474412 ESYT1Q9BSJ8 1104 aa10.42□□□□□ -0.74
VPS50-211ENST00000474412 LZTS3O60299 673 aaPredicted RBP10.41□□□□□ -0.74
VPS50-211ENST00000474412 TOM1O60784 492 aa10.41□□□□□ -0.74
VPS50-211ENST00000474412 PPFIA3O75145 1194 aa10.41□□□□□ -0.74
VPS50-211ENST00000474412 IL2RAP01589 272 aa10.41□□□□□ -0.74
VPS50-211ENST00000474412 KCNA6P17658 529 aa10.41□□□□□ -0.74
VPS50-211ENST00000474412 TBC1D9Q6ZT07 1266 aa10.41□□□□□ -0.74
VPS50-211ENST00000474412 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
VPS50-211ENST00000474412 METP08581 1390 aa10.4□□□□□ -0.74
VPS50-211ENST00000474412 LAMC1P11047 1609 aa10.4□□□□□ -0.74
VPS50-211ENST00000474412 AHDC1Q5TGY3 1603 aaPredicted RBP10.4□□□□□ -0.74
VPS50-211ENST00000474412 STAU1O95793 577 aaKnown RBP10.4□□□□□ -0.74
VPS50-211ENST00000474412 RHOQP17081 205 aa10.4□□□□□ -0.74
VPS50-211ENST00000474412 ILDR2Q71H61 639 aa10.4□□□□□ -0.74
VPS50-211ENST00000474412 IRF7Q92985 503 aa10.4□□□□□ -0.74
VPS50-211ENST00000474412 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
VPS50-211ENST00000474412 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 ATP9BO43861 1147 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
VPS50-211ENST00000474412 GDF10P55107 478 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 CENPCQ03188 943 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 PSME1Q06323 249 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 CCDC155Q8N6L0 562 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 SETD5Q9C0A6 1442 aa10.39□□□□□ -0.75
VPS50-211ENST00000474412 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 GTF2IP78347 998 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 ZNF326Q5BKZ1 582 aaKnown RBP10.38□□□□□ -0.75
VPS50-211ENST00000474412 USP17L2Q6R6M4 530 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 XAGE2Q96GT9 111 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 FMN2Q9NZ56 1722 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 MSH6P52701 1360 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 PIK3R4Q99570 1358 aa10.38□□□□□ -0.75
VPS50-211ENST00000474412 CCDC144AA2RUR9 1427 aa10.37□□□□□ -0.75
VPS50-211ENST00000474412 SLC35F4A4IF30 521 aa10.37□□□□□ -0.75
VPS50-211ENST00000474412 POU4F2Q12837 409 aa10.37□□□□□ -0.75
VPS50-211ENST00000474412 TLR1Q15399 786 aa10.37□□□□□ -0.75
VPS50-211ENST00000474412 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS50-211ENST00000474412 ZSCAN10Q96SZ4 725 aaPredicted RBP10.37□□□□□ -0.75
VPS50-211ENST00000474412 GRIP2Q9C0E4 1043 aa10.37□□□□□ -0.75
VPS50-211ENST00000474412 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
VPS50-211ENST00000474412 PLEKHM2Q8IWE5 1019 aa10.36□□□□□ -0.75
VPS50-211ENST00000474412 TBX22Q9Y458 520 aa10.36□□□□□ -0.75
VPS50-211ENST00000474412 ARHGEF28Q8N1W1 1705 aaKnown RBP10.36□□□□□ -0.75
VPS50-211ENST00000474412 ERBB4Q15303 1308 aa10.35□□□□□ -0.75
VPS50-211ENST00000474412 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
VPS50-211ENST00000474412 FAM135BQ49AJ0 1406 aa10.35□□□□□ -0.75
VPS50-211ENST00000474412 ADGRL3Q9HAR2 1447 aa10.35□□□□□ -0.75
VPS50-211ENST00000474412 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms