RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
BRD3-205ENST00000473349 ZNF541Q9H0D2 1346 aa12.51□□□□□ -0.41
BRD3-205ENST00000473349 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
BRD3-205ENST00000473349 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
BRD3-205ENST00000473349 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
BRD3-205ENST00000473349 EIF2S2P20042 333 aaKnown RBP12.5□□□□□ -0.41
BRD3-205ENST00000473349 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
BRD3-205ENST00000473349 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
BRD3-205ENST00000473349 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
BRD3-205ENST00000473349 SUSD4Q5VX71 490 aa12.5□□□□□ -0.41
BRD3-205ENST00000473349 PNISRQ8TF01 805 aaKnown RBP12.5□□□□□ -0.41
BRD3-205ENST00000473349 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
BRD3-205ENST00000473349 MAP3K15Q6ZN16 1313 aa12.5□□□□□ -0.41
BRD3-205ENST00000473349 NUP98P52948 1817 aa12.49□□□□□ -0.41
BRD3-205ENST00000473349 RIPK4P57078 832 aa12.49□□□□□ -0.41
BRD3-205ENST00000473349 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
BRD3-205ENST00000473349 COL4A5P29400 1685 aa12.48□□□□□ -0.41
BRD3-205ENST00000473349 RGL2O15211 777 aa12.48□□□□□ -0.41
BRD3-205ENST00000473349 FKBP4Q02790 459 aaKnown RBP eCLIP12.48□□□□□ -0.41
BRD3-205ENST00000473349 PDIA6Q15084 440 aa12.48□□□□□ -0.41
BRD3-205ENST00000473349 KIF6Q6ZMV9 814 aa12.48□□□□□ -0.41
BRD3-205ENST00000473349 LRP10Q7Z4F1 713 aa12.48□□□□□ -0.41
BRD3-205ENST00000473349 JMYQ8N9B5 988 aa12.48□□□□□ -0.41
BRD3-205ENST00000473349 ERVV-1B6SEH8 477 aa12.47□□□□□ -0.41
BRD3-205ENST00000473349 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
BRD3-205ENST00000473349 CRY2Q49AN0 593 aa12.47□□□□□ -0.41
BRD3-205ENST00000473349 COL13A1Q5TAT6 717 aaPredicted RBP12.47□□□□□ -0.41
BRD3-205ENST00000473349 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
BRD3-205ENST00000473349 SYNE4Q8N205 404 aa12.47□□□□□ -0.41
BRD3-205ENST00000473349 SNED1Q8TER0 1413 aa12.46□□□□□ -0.41
BRD3-205ENST00000473349 NTSR2O95665 410 aa12.46□□□□□ -0.41
BRD3-205ENST00000473349 ZNF34Q8IZ26 560 aa12.46□□□□□ -0.41
BRD3-205ENST00000473349 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
BRD3-205ENST00000473349 AIMP1Q12904 312 aaKnown RBP12.45□□□□□ -0.42
BRD3-205ENST00000473349 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
BRD3-205ENST00000473349 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
BRD3-205ENST00000473349 GIGYF2Q6Y7W6 1299 aaKnown RBP12.45□□□□□ -0.42
BRD3-205ENST00000473349 NYXQ9GZU5 481 aa12.45□□□□□ -0.42
BRD3-205ENST00000473349 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
BRD3-205ENST00000473349 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
BRD3-205ENST00000473349 MKRN1Q9UHC7 482 aaKnown RBP12.45□□□□□ -0.42
BRD3-205ENST00000473349 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
BRD3-205ENST00000473349 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
BRD3-205ENST00000473349 ALDH1B1P30837 517 aa12.44□□□□□ -0.42
BRD3-205ENST00000473349 IARSP41252 1262 aaKnown RBP12.44□□□□□ -0.42
BRD3-205ENST00000473349 RALBP1Q15311 655 aa12.44□□□□□ -0.42
BRD3-205ENST00000473349 RTKN2Q8IZC4 609 aa12.44□□□□□ -0.42
BRD3-205ENST00000473349 RPGRQ92834 1020 aaKnown RBP12.44□□□□□ -0.42
BRD3-205ENST00000473349 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
BRD3-205ENST00000473349 COPS6Q7L5N1 327 aa12.43□□□□□ -0.42
BRD3-205ENST00000473349 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
BRD3-205ENST00000473349 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
BRD3-205ENST00000473349 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
BRD3-205ENST00000473349 FZD9O00144 591 aa12.42□□□□□ -0.42
BRD3-205ENST00000473349 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
BRD3-205ENST00000473349 HSPA1AP0DMV8 641 aaKnown RBP12.42□□□□□ -0.42
BRD3-205ENST00000473349 HSPA1BP0DMV9 641 aaKnown RBP12.42□□□□□ -0.42
BRD3-205ENST00000473349 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
BRD3-205ENST00000473349 HOXA10P31260 410 aaPredicted RBP12.42□□□□□ -0.42
BRD3-205ENST00000473349 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
BRD3-205ENST00000473349 GJA3Q9Y6H8 435 aa12.42□□□□□ -0.42
BRD3-205ENST00000473349 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 CHL1O00533 1208 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 EPHX2P34913 555 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
BRD3-205ENST00000473349 LTBP1Q14766 1721 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
BRD3-205ENST00000473349 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 RBM17Q96I25 401 aaKnown RBP12.41□□□□□ -0.42
BRD3-205ENST00000473349 UTP14AQ9BVJ6 771 aaKnown RBP12.41□□□□□ -0.42
BRD3-205ENST00000473349 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 HACL1Q9UJ83 578 aa12.41□□□□□ -0.42
BRD3-205ENST00000473349 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
BRD3-205ENST00000473349 PASKQ96RG2 1323 aa12.4□□□□□ -0.42
BRD3-205ENST00000473349 IQCA1LA6NCM1 817 aa12.4□□□□□ -0.42
BRD3-205ENST00000473349 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
BRD3-205ENST00000473349 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
BRD3-205ENST00000473349 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
BRD3-205ENST00000473349 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.42
BRD3-205ENST00000473349 PSMD1Q99460 953 aa12.4□□□□□ -0.42
BRD3-205ENST00000473349 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
BRD3-205ENST00000473349 ABCC4O15439 1325 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 SCN4AP35499 1836 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 ADAMTSL1Q8N6G6 1762 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 EPS15P42566 896 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
BRD3-205ENST00000473349 AOC3Q16853 763 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 PARP10Q53GL7 1025 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 JDP2Q8WYK2 163 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 RUNDC1Q96C34 613 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
BRD3-205ENST00000473349 COL4A1P02462 1669 aa12.38□□□□□ -0.43
BRD3-205ENST00000473349 LAMB2P55268 1798 aa12.38□□□□□ -0.43
BRD3-205ENST00000473349 TAF1P21675 1872 aa12.38□□□□□ -0.43
BRD3-205ENST00000473349 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
BRD3-205ENST00000473349 LMOD3Q0VAK6 560 aa12.38□□□□□ -0.43
BRD3-205ENST00000473349 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
BRD3-205ENST00000473349 GPC2Q8N158 579 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms