RNA–Protein interactions for RNA: ENST00000471824.6

PDE6B-207, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-207ENST00000471824 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
PDE6B-207ENST00000471824 ZBTB3Q9H5J0 574 aa12.2□□□□□ -0.46
PDE6B-207ENST00000471824 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
PDE6B-207ENST00000471824 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
PDE6B-207ENST00000471824 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
PDE6B-207ENST00000471824 NTSR2O95665 410 aa12.19□□□□□ -0.46
PDE6B-207ENST00000471824 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
PDE6B-207ENST00000471824 SUSD4Q5VX71 490 aa12.19□□□□□ -0.46
PDE6B-207ENST00000471824 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
PDE6B-207ENST00000471824 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
PDE6B-207ENST00000471824 RBM17Q96I25 401 aaKnown RBP12.19□□□□□ -0.46
PDE6B-207ENST00000471824 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
PDE6B-207ENST00000471824 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
PDE6B-207ENST00000471824 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
PDE6B-207ENST00000471824 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
PDE6B-207ENST00000471824 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
PDE6B-207ENST00000471824 RIPK4P57078 832 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 LMOD3Q0VAK6 560 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 PDIA6Q15084 440 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 RALBP1Q15311 655 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 CNTROBQ8N137 903 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 NLRP3Q96P20 1036 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 VPS33BQ9H267 617 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 LAMB4A4D0S4 1761 aa12.17□□□□□ -0.46
PDE6B-207ENST00000471824 SCN4AP35499 1836 aa12.16□□□□□ -0.46
PDE6B-207ENST00000471824 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
PDE6B-207ENST00000471824 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
PDE6B-207ENST00000471824 VEGFBP49765 207 aa12.16□□□□□ -0.46
PDE6B-207ENST00000471824 LARGE2Q8N3Y3 721 aa12.16□□□□□ -0.46
PDE6B-207ENST00000471824 UTP14AQ9BVJ6 771 aaKnown RBP12.16□□□□□ -0.46
PDE6B-207ENST00000471824 TMX4Q9H1E5 349 aaPredicted RBP12.16□□□□□ -0.46
PDE6B-207ENST00000471824 CCDC88AQ3V6T2 1871 aa12.16□□□□□ -0.46
PDE6B-207ENST00000471824 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 CAPN15O75808 1086 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
PDE6B-207ENST00000471824 SCNN1DP51172 638 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 HSP90AB3PQ58FF7 597 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
PDE6B-207ENST00000471824 C3orf67Q6ZVT6 689 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 PRDM10Q9NQV6 1147 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 ATP6V0A2Q9Y487 856 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.46
PDE6B-207ENST00000471824 FOXN1O15353 648 aa12.14□□□□□ -0.47
PDE6B-207ENST00000471824 TMPOP42166 694 aaKnown RBP12.14□□□□□ -0.47
PDE6B-207ENST00000471824 PROSER3Q2NL68 480 aa12.14□□□□□ -0.47
PDE6B-207ENST00000471824 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
PDE6B-207ENST00000471824 NIM1KQ8IY84 436 aa12.14□□□□□ -0.47
PDE6B-207ENST00000471824 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
PDE6B-207ENST00000471824 AIDAQ96BJ3 306 aa12.14□□□□□ -0.47
PDE6B-207ENST00000471824 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
PDE6B-207ENST00000471824 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDE6B-207ENST00000471824 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
PDE6B-207ENST00000471824 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
PDE6B-207ENST00000471824 BBOX1O75936 387 aa12.13□□□□□ -0.47
PDE6B-207ENST00000471824 CTCFP49711 727 aaPredicted RBP12.13□□□□□ -0.47
PDE6B-207ENST00000471824 DEFB115Q30KQ5 88 aa12.13□□□□□ -0.47
PDE6B-207ENST00000471824 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
PDE6B-207ENST00000471824 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
PDE6B-207ENST00000471824 COL4A5P29400 1685 aa12.13□□□□□ -0.47
PDE6B-207ENST00000471824 ABCC4O15439 1325 aa12.12□□□□□ -0.47
PDE6B-207ENST00000471824 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
PDE6B-207ENST00000471824 EPS15P42566 896 aa12.12□□□□□ -0.47
PDE6B-207ENST00000471824 TCIRG1Q13488 830 aa12.12□□□□□ -0.47
PDE6B-207ENST00000471824 NLRP10Q86W26 655 aa12.12□□□□□ -0.47
PDE6B-207ENST00000471824 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
PDE6B-207ENST00000471824 CHL1O00533 1208 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 ANXA1P04083 346 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 MAP2K1Q02750 393 aaPredicted RBP12.11□□□□□ -0.47
PDE6B-207ENST00000471824 AOC3Q16853 763 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
PDE6B-207ENST00000471824 SLC51AQ86UW1 340 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 SP8Q8IXZ3 490 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
PDE6B-207ENST00000471824 GPRC5DQ9NZD1 345 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 TRMT112Q9UI30 125 aaKnown RBP12.11□□□□□ -0.47
PDE6B-207ENST00000471824 ABT1Q9ULW3 272 aaKnown RBP12.11□□□□□ -0.47
PDE6B-207ENST00000471824 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
PDE6B-207ENST00000471824 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
PDE6B-207ENST00000471824 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
PDE6B-207ENST00000471824 HOXB7P09629 217 aa12.1□□□□□ -0.47
PDE6B-207ENST00000471824 HCLS1P14317 486 aaPredicted RBP12.1□□□□□ -0.47
PDE6B-207ENST00000471824 CXCL9Q07325 125 aa12.1□□□□□ -0.47
PDE6B-207ENST00000471824 KIAA2012Q0VF49 1180 aa12.1□□□□□ -0.47
PDE6B-207ENST00000471824 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
PDE6B-207ENST00000471824 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
PDE6B-207ENST00000471824 TMC4Q7Z404 712 aa12.1□□□□□ -0.47
PDE6B-207ENST00000471824 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
PDE6B-207ENST00000471824 CDHR2Q9BYE9 1310 aa12.1□□□□□ -0.47
PDE6B-207ENST00000471824 GRAPQ13588 217 aa12.09□□□□□ -0.47
PDE6B-207ENST00000471824 MPNDQ8N594 471 aa12.09□□□□□ -0.47
PDE6B-207ENST00000471824 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
PDE6B-207ENST00000471824 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
PDE6B-207ENST00000471824 ECE1P42892 770 aa12.08□□□□□ -0.48
PDE6B-207ENST00000471824 TNIP1Q15025 636 aa12.08□□□□□ -0.48
PDE6B-207ENST00000471824 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
PDE6B-207ENST00000471824 CST9Q5W186 159 aa12.08□□□□□ -0.48
PDE6B-207ENST00000471824 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
PDE6B-207ENST00000471824 PLBD2Q8NHP8 589 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms