RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 CPNE3O75131 537 aaKnown RBP10.08□□□□□ -0.8
SMC5-202ENST00000471372 RACK1P63244 317 aaKnown RBP10.08□□□□□ -0.8
SMC5-202ENST00000471372 USPL1Q5W0Q7 1092 aa10.08□□□□□ -0.8
SMC5-202ENST00000471372 RHPN1Q8TCX5 695 aa10.08□□□□□ -0.8
SMC5-202ENST00000471372 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
SMC5-202ENST00000471372 FOXD3Q9UJU5 478 aaPredicted RBP10.08□□□□□ -0.8
SMC5-202ENST00000471372 NEFLP07196 543 aa10.07□□□□□ -0.8
SMC5-202ENST00000471372 DNAJA1P31689 397 aaKnown RBP10.07□□□□□ -0.8
SMC5-202ENST00000471372 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
SMC5-202ENST00000471372 TGFBR3LH3BV60 316 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 TNFRSF10AO00220 468 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 DGAT1O75907 488 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 ATP2B1P20020 1258 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 GTF2E1P29083 439 aaPredicted RBP10.06□□□□□ -0.8
SMC5-202ENST00000471372 GTF2F1P35269 517 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMC5-202ENST00000471372 IRS1P35568 1242 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 WDR4P57081 412 aaKnown RBP10.06□□□□□ -0.8
SMC5-202ENST00000471372 C4orf17Q53FE4 359 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 GIMAP6Q6P9H5 292 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 ZNF280CQ8ND82 737 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 OSBPL7Q9BZF2 842 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 GRIP2Q9C0E4 1043 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 NLRP2Q9NX02 1062 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 DMGDHQ9UI17 866 aaKnown RBP10.06□□□□□ -0.8
SMC5-202ENST00000471372 USP20Q9Y2K6 914 aa10.06□□□□□ -0.8
SMC5-202ENST00000471372 TNFRSF21O75509 655 aa10.05□□□□□ -0.8
SMC5-202ENST00000471372 RPLP1P05386 114 aaKnown RBP10.05□□□□□ -0.8
SMC5-202ENST00000471372 GNL2Q13823 731 aaKnown RBP10.05□□□□□ -0.8
SMC5-202ENST00000471372 EPS8L3Q8TE67 593 aaKnown RBP10.05□□□□□ -0.8
SMC5-202ENST00000471372 CCDC74AQ96AQ1 378 aa10.05□□□□□ -0.8
SMC5-202ENST00000471372 AIDAQ96BJ3 306 aa10.05□□□□□ -0.8
SMC5-202ENST00000471372 HSH2DQ96JZ2 352 aa10.05□□□□□ -0.8
SMC5-202ENST00000471372 SUSD3Q96L08 255 aa10.05□□□□□ -0.8
SMC5-202ENST00000471372 LNPKQ9C0E8 428 aa10.05□□□□□ -0.8
SMC5-202ENST00000471372 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 TIMP2P16035 220 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 IDH3AP50213 366 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 FOXC1Q12948 553 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 GNASQ5JWF2 1037 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 SLC27A3Q5K4L6 730 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 USP48Q86UV5 1035 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 GMLQ99445 158 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 C12orf49Q9H741 205 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 SRA1Q9HD15 236 aaKnown RBP10.04□□□□□ -0.8
SMC5-202ENST00000471372 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
SMC5-202ENST00000471372 GDF9O60383 454 aa10.03□□□□□ -0.8
SMC5-202ENST00000471372 MEI1Q5TIA1 1274 aa10.03□□□□□ -0.8
SMC5-202ENST00000471372 ZNF654Q8IZM8 581 aa10.03□□□□□ -0.8
SMC5-202ENST00000471372 PKD2L1Q9P0L9 805 aa10.03□□□□□ -0.8
SMC5-202ENST00000471372 J3QL48 77 aa10.02□□□□□ -0.81
SMC5-202ENST00000471372 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
SMC5-202ENST00000471372 CANXP27824 592 aaKnown RBP10.02□□□□□ -0.81
SMC5-202ENST00000471372 PHKA2P46019 1235 aa10.02□□□□□ -0.81
SMC5-202ENST00000471372 PTPN12Q05209 780 aaKnown RBP10.02□□□□□ -0.81
SMC5-202ENST00000471372 TRIP4Q15650 581 aaPredicted RBP10.02□□□□□ -0.81
SMC5-202ENST00000471372 NBPF1Q3BBV0 1214 aa10.02□□□□□ -0.81
SMC5-202ENST00000471372 GGT7Q9UJ14 662 aa10.02□□□□□ -0.81
SMC5-202ENST00000471372 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.81
SMC5-202ENST00000471372 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
SMC5-202ENST00000471372 GPC1P35052 558 aa10.01□□□□□ -0.81
SMC5-202ENST00000471372 HIF1AQ16665 826 aa10.01□□□□□ -0.81
SMC5-202ENST00000471372 IER5Q5VY09 327 aa10.01□□□□□ -0.81
SMC5-202ENST00000471372 HS2ST1Q7LGA3 356 aa10.01□□□□□ -0.81
SMC5-202ENST00000471372 INSM2Q96T92 566 aaPredicted RBP10.01□□□□□ -0.81
SMC5-202ENST00000471372 CUEDC1Q9NWM3 386 aaPredicted RBP10.01□□□□□ -0.81
SMC5-202ENST00000471372 ZDHHC3Q9NYG2 299 aa10.01□□□□□ -0.81
SMC5-202ENST00000471372 INPP5BP32019 993 aa10□□□□□ -0.81
SMC5-202ENST00000471372 RNF144AP50876 292 aaPredicted RBP10□□□□□ -0.81
SMC5-202ENST00000471372 ARID5AQ03989 594 aa10□□□□□ -0.81
SMC5-202ENST00000471372 XKR5Q6UX68 686 aa10□□□□□ -0.81
SMC5-202ENST00000471372 ZNF438Q7Z4V0 828 aa10□□□□□ -0.81
SMC5-202ENST00000471372 CMTR1Q8N1G2 835 aaKnown RBP10□□□□□ -0.81
SMC5-202ENST00000471372 MEIOBQ8N635 442 aa10□□□□□ -0.81
SMC5-202ENST00000471372 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
SMC5-202ENST00000471372 SNX29Q8TEQ0 813 aa10□□□□□ -0.81
SMC5-202ENST00000471372 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
SMC5-202ENST00000471372 ZFYVE28Q9HCC9 887 aa10□□□□□ -0.81
SMC5-202ENST00000471372 ARSDP51689 593 aa9.99□□□□□ -0.81
SMC5-202ENST00000471372 NPHS2Q9NP85 383 aa9.99□□□□□ -0.81
SMC5-202ENST00000471372 TMEM63CQ9P1W3 806 aa9.99□□□□□ -0.81
SMC5-202ENST00000471372 RTCBQ9Y3I0 505 aaKnown RBP9.99□□□□□ -0.81
SMC5-202ENST00000471372 KCNMB2Q9Y691 235 aa9.99□□□□□ -0.81
SMC5-202ENST00000471372 UBAP1LF5GYI3 381 aa9.98□□□□□ -0.81
SMC5-202ENST00000471372 GIPC1O14908 333 aa9.98□□□□□ -0.81
SMC5-202ENST00000471372 POLR3DP05423 398 aaPredicted RBP9.98□□□□□ -0.81
SMC5-202ENST00000471372 USP17L7P0C7H9 530 aa9.98□□□□□ -0.81
SMC5-202ENST00000471372 TAF1CQ15572 869 aaPredicted RBP9.98□□□□□ -0.81
SMC5-202ENST00000471372 CCDC144BQ3MJ40 725 aa9.98□□□□□ -0.81
SMC5-202ENST00000471372 BICDL1Q6ZP65 573 aa9.98□□□□□ -0.81
SMC5-202ENST00000471372 ARMC5Q96C12 935 aa9.98□□□□□ -0.81
SMC5-202ENST00000471372 FAM8A1Q9UBU6 413 aa9.98□□□□□ -0.81
SMC5-202ENST00000471372 PHACTR2O75167 634 aa9.97□□□□□ -0.81
SMC5-202ENST00000471372 TATP17735 454 aaPredicted RBP9.97□□□□□ -0.81
SMC5-202ENST00000471372 ATP4AP20648 1035 aa9.97□□□□□ -0.81
SMC5-202ENST00000471372 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
SMC5-202ENST00000471372 NXPE4Q6UWF7 544 aa9.97□□□□□ -0.81
SMC5-202ENST00000471372 BTLAQ7Z6A9 289 aa9.97□□□□□ -0.81
SMC5-202ENST00000471372 PMFBP1Q8TBY8 1022 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms