RNA–Protein interactions for RNA: ENST00000470902.5

LCN2-204, Transcript of lipocalin 2, humanhuman

TSL 5

Gene LCN2, Length 877 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-204ENST00000470902 CNTNAP1P78357 1384 aa20.5■□□□□ 0.87
LCN2-204ENST00000470902 IBTKQ9P2D0 1353 aaPredicted RBP20.5■□□□□ 0.87
LCN2-204ENST00000470902 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
LCN2-204ENST00000470902 GPC2Q8N158 579 aa20.5■□□□□ 0.87
LCN2-204ENST00000470902 TSPYL4Q9UJ04 414 aa20.5■□□□□ 0.87
LCN2-204ENST00000470902 RIC1Q4ADV7 1423 aa20.5■□□□□ 0.87
LCN2-204ENST00000470902 SNED1Q8TER0 1413 aa20.5■□□□□ 0.87
LCN2-204ENST00000470902 ITGBL1O95965 494 aaPredicted RBP20.49■□□□□ 0.87
LCN2-204ENST00000470902 HOXA10P31260 410 aaPredicted RBP20.49■□□□□ 0.87
LCN2-204ENST00000470902 ZNF34Q8IZ26 560 aa20.49■□□□□ 0.87
LCN2-204ENST00000470902 ERBB4Q15303 1308 aa20.49■□□□□ 0.87
LCN2-204ENST00000470902 TMEM88BA6NKF7 163 aa20.48■□□□□ 0.87
LCN2-204ENST00000470902 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
LCN2-204ENST00000470902 GIGYF2Q6Y7W6 1299 aaKnown RBP20.48■□□□□ 0.87
LCN2-204ENST00000470902 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
LCN2-204ENST00000470902 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
LCN2-204ENST00000470902 GJA3Q9Y6H8 435 aa20.48■□□□□ 0.87
LCN2-204ENST00000470902 ADAMTSL1Q8N6G6 1762 aa20.47■□□□□ 0.87
LCN2-204ENST00000470902 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
LCN2-204ENST00000470902 NTSR2O95665 410 aa20.47■□□□□ 0.87
LCN2-204ENST00000470902 EIF2S2P20042 333 aaKnown RBP20.47■□□□□ 0.87
LCN2-204ENST00000470902 EIF6P56537 245 aaKnown RBP20.47■□□□□ 0.87
LCN2-204ENST00000470902 PPP1R42Q7Z4L9 355 aa20.47■□□□□ 0.87
LCN2-204ENST00000470902 CRAMP1Q96RY5 1269 aa20.47■□□□□ 0.87
LCN2-204ENST00000470902 COL4A5P29400 1685 aa20.46■□□□□ 0.87
LCN2-204ENST00000470902 RIPK4P57078 832 aa20.46■□□□□ 0.87
LCN2-204ENST00000470902 GRIPAP1Q4V328 841 aa20.46■□□□□ 0.87
LCN2-204ENST00000470902 MAP1SQ66K74 1059 aaPredicted RBP20.46■□□□□ 0.87
LCN2-204ENST00000470902 SLC51AQ86UW1 340 aa20.46■□□□□ 0.87
LCN2-204ENST00000470902 LARGE2Q8N3Y3 721 aa20.46■□□□□ 0.87
LCN2-204ENST00000470902 PARP10Q53GL7 1025 aa20.45■□□□□ 0.86
LCN2-204ENST00000470902 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
LCN2-204ENST00000470902 CNTROBQ8N137 903 aa20.45■□□□□ 0.86
LCN2-204ENST00000470902 LMOD1P29536 600 aaPredicted RBP20.44■□□□□ 0.86
LCN2-204ENST00000470902 VEGFBP49765 207 aa20.44■□□□□ 0.86
LCN2-204ENST00000470902 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
LCN2-204ENST00000470902 FOXN1O15353 648 aa20.43■□□□□ 0.86
LCN2-204ENST00000470902 ANXA1P04083 346 aa20.43■□□□□ 0.86
LCN2-204ENST00000470902 PDIA6Q15084 440 aa20.43■□□□□ 0.86
LCN2-204ENST00000470902 PROSER3Q2NL68 480 aa20.43■□□□□ 0.86
LCN2-204ENST00000470902 LRP10Q7Z4F1 713 aa20.43■□□□□ 0.86
LCN2-204ENST00000470902 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
LCN2-204ENST00000470902 TMX4Q9H1E5 349 aaPredicted RBP20.43■□□□□ 0.86
LCN2-204ENST00000470902 AIDAQ96BJ3 306 aa20.42■□□□□ 0.86
LCN2-204ENST00000470902 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
LCN2-204ENST00000470902 LMOD3Q0VAK6 560 aa20.41■□□□□ 0.86
LCN2-204ENST00000470902 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
LCN2-204ENST00000470902 NECTIN2Q92692 538 aa20.41■□□□□ 0.86
LCN2-204ENST00000470902 BABAM1Q9NWV8 329 aa20.41■□□□□ 0.86
LCN2-204ENST00000470902 LTBP1Q14766 1721 aa20.41■□□□□ 0.86
LCN2-204ENST00000470902 PPIP5K2O43314 1243 aa20.4■□□□□ 0.86
LCN2-204ENST00000470902 EPS15P42566 896 aa20.4■□□□□ 0.86
LCN2-204ENST00000470902 SCNN1DP51172 638 aa20.4■□□□□ 0.86
LCN2-204ENST00000470902 RALBP1Q15311 655 aa20.4■□□□□ 0.86
LCN2-204ENST00000470902 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
LCN2-204ENST00000470902 AOC3Q16853 763 aa20.39■□□□□ 0.85
LCN2-204ENST00000470902 DEFB115Q30KQ5 88 aa20.39■□□□□ 0.85
LCN2-204ENST00000470902 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
LCN2-204ENST00000470902 ABT1Q9ULW3 272 aaKnown RBP20.39■□□□□ 0.85
LCN2-204ENST00000470902 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.85
LCN2-204ENST00000470902 ABCC4O15439 1325 aa20.38■□□□□ 0.85
LCN2-204ENST00000470902 RASSF10A6NK89 507 aa20.38■□□□□ 0.85
LCN2-204ENST00000470902 COPS6Q7L5N1 327 aa20.38■□□□□ 0.85
LCN2-204ENST00000470902 XAGE3Q8WTP9 111 aa20.38■□□□□ 0.85
LCN2-204ENST00000470902 ANKRD36CQ5JPF3 1778 aa20.37■□□□□ 0.85
LCN2-204ENST00000470902 CTCFP49711 727 aaPredicted RBP20.37■□□□□ 0.85
LCN2-204ENST00000470902 NEUROD2Q15784 382 aa20.37■□□□□ 0.85
LCN2-204ENST00000470902 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
LCN2-204ENST00000470902 DDX21Q9NR30 783 aaKnown RBP eCLIP20.37■□□□□ 0.85
LCN2-204ENST00000470902 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
LCN2-204ENST00000470902 USP50Q70EL3 339 aaPredicted RBP20.36■□□□□ 0.85
LCN2-204ENST00000470902 NLRP10Q86W26 655 aa20.36■□□□□ 0.85
LCN2-204ENST00000470902 CCDC146Q8IYE0 955 aa20.36■□□□□ 0.85
LCN2-204ENST00000470902 PRDM10Q9NQV6 1147 aa20.36■□□□□ 0.85
LCN2-204ENST00000470902 WBP1LQ9NX94 342 aa20.36■□□□□ 0.85
LCN2-204ENST00000470902 FMR1Q06787 632 aaKnown RBP eCLIP20.35■□□□□ 0.85
LCN2-204ENST00000470902 KRT24Q2M2I5 525 aa20.35■□□□□ 0.85
LCN2-204ENST00000470902 SUPT20HQ8NEM7 779 aa20.35■□□□□ 0.85
LCN2-204ENST00000470902 VPS33BQ9H267 617 aa20.35■□□□□ 0.85
LCN2-204ENST00000470902 TRMT112Q9UI30 125 aaKnown RBP20.35■□□□□ 0.85
LCN2-204ENST00000470902 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
LCN2-204ENST00000470902 LAMB2P55268 1798 aa20.35■□□□□ 0.85
LCN2-204ENST00000470902 WDR33Q9C0J8 1336 aaKnown RBP20.34■□□□□ 0.85
LCN2-204ENST00000470902 BBOX1O75936 387 aa20.34■□□□□ 0.85
LCN2-204ENST00000470902 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
LCN2-204ENST00000470902 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
LCN2-204ENST00000470902 ZNRF3Q9ULT6 936 aa20.34■□□□□ 0.85
LCN2-204ENST00000470902 PAXIP1Q6ZW49 1069 aaPredicted RBP20.33■□□□□ 0.85
LCN2-204ENST00000470902 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.85
LCN2-204ENST00000470902 SP8Q8IXZ3 490 aa20.33■□□□□ 0.85
LCN2-204ENST00000470902 MPNDQ8N594 471 aa20.33■□□□□ 0.85
LCN2-204ENST00000470902 ZNF428Q96B54 188 aa20.33■□□□□ 0.85
LCN2-204ENST00000470902 RTFDC1Q9BY42 306 aaPredicted RBP20.33■□□□□ 0.85
LCN2-204ENST00000470902 GPRC5DQ9NZD1 345 aa20.33■□□□□ 0.85
LCN2-204ENST00000470902 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
LCN2-204ENST00000470902 TRAF5O00463 557 aa20.32■□□□□ 0.84
LCN2-204ENST00000470902 CHL1O00533 1208 aa20.32■□□□□ 0.84
LCN2-204ENST00000470902 LBX1P52954 281 aa20.32■□□□□ 0.84
LCN2-204ENST00000470902 CXCL9Q07325 125 aa20.32■□□□□ 0.84
LCN2-204ENST00000470902 ADARB2Q9NS39 739 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms