RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 NECTIN2Q92692 538 aa17.6■□□□□ 0.41
LINC00173-201ENST00000470091 ABCC12Q96J65 1359 aa17.59■□□□□ 0.41
LINC00173-201ENST00000470091 ANXA1P04083 346 aa17.59■□□□□ 0.41
LINC00173-201ENST00000470091 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
LINC00173-201ENST00000470091 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
LINC00173-201ENST00000470091 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
LINC00173-201ENST00000470091 COL13A1Q5TAT6 717 aaPredicted RBP17.59■□□□□ 0.41
LINC00173-201ENST00000470091 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
LINC00173-201ENST00000470091 DICER1Q9UPY3 1922 aaKnown RBP17.59■□□□□ 0.41
LINC00173-201ENST00000470091 UBN2Q6ZU65 1347 aa17.58■□□□□ 0.4
LINC00173-201ENST00000470091 ZNF541Q9H0D2 1346 aa17.58■□□□□ 0.4
LINC00173-201ENST00000470091 IQCA1LA6NCM1 817 aa17.58■□□□□ 0.4
LINC00173-201ENST00000470091 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.4
LINC00173-201ENST00000470091 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.4
LINC00173-201ENST00000470091 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
LINC00173-201ENST00000470091 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
LINC00173-201ENST00000470091 PROSER3Q2NL68 480 aa17.57■□□□□ 0.4
LINC00173-201ENST00000470091 CRY2Q49AN0 593 aa17.57■□□□□ 0.4
LINC00173-201ENST00000470091 GIGYF2Q6Y7W6 1299 aaKnown RBP17.57■□□□□ 0.4
LINC00173-201ENST00000470091 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
LINC00173-201ENST00000470091 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
LINC00173-201ENST00000470091 AIMP1Q12904 312 aaKnown RBP17.56■□□□□ 0.4
LINC00173-201ENST00000470091 PDIA6Q15084 440 aa17.56■□□□□ 0.4
LINC00173-201ENST00000470091 C3orf67Q6ZVT6 689 aa17.56■□□□□ 0.4
LINC00173-201ENST00000470091 SLC51AQ86UW1 340 aa17.56■□□□□ 0.4
LINC00173-201ENST00000470091 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
LINC00173-201ENST00000470091 MKRN1Q9UHC7 482 aaKnown RBP17.56■□□□□ 0.4
LINC00173-201ENST00000470091 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
LINC00173-201ENST00000470091 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
LINC00173-201ENST00000470091 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
LINC00173-201ENST00000470091 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
LINC00173-201ENST00000470091 JDP2Q8WYK2 163 aa17.55■□□□□ 0.4
LINC00173-201ENST00000470091 L3MBTL3Q96JM7 780 aaPredicted RBP17.55■□□□□ 0.4
LINC00173-201ENST00000470091 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
LINC00173-201ENST00000470091 HACL1Q9UJ83 578 aa17.55■□□□□ 0.4
LINC00173-201ENST00000470091 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
LINC00173-201ENST00000470091 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
LINC00173-201ENST00000470091 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
LINC00173-201ENST00000470091 E9PSI1 815 aa17.54■□□□□ 0.4
LINC00173-201ENST00000470091 NTSR2O95665 410 aa17.54■□□□□ 0.4
LINC00173-201ENST00000470091 HOXA10P31260 410 aaPredicted RBP17.54■□□□□ 0.4
LINC00173-201ENST00000470091 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
LINC00173-201ENST00000470091 NUP98P52948 1817 aa17.54■□□□□ 0.4
LINC00173-201ENST00000470091 FZD9O00144 591 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 HSPA1AP0DMV8 641 aaKnown RBP17.53■□□□□ 0.4
LINC00173-201ENST00000470091 HSPA1BP0DMV9 641 aaKnown RBP17.53■□□□□ 0.4
LINC00173-201ENST00000470091 LMOD3Q0VAK6 560 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 COPS6Q7L5N1 327 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 PSMD1Q99460 953 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
LINC00173-201ENST00000470091 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
LINC00173-201ENST00000470091 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
LINC00173-201ENST00000470091 EPHX2P34913 555 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 PARP10Q53GL7 1025 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 LRP10Q7Z4F1 713 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 XAGE3Q8WTP9 111 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
LINC00173-201ENST00000470091 CAPN15O75808 1086 aa17.51■□□□□ 0.39
LINC00173-201ENST00000470091 EIF6P56537 245 aaKnown RBP17.51■□□□□ 0.39
LINC00173-201ENST00000470091 TRMT2AQ8IZ69 625 aaKnown RBP17.51■□□□□ 0.39
LINC00173-201ENST00000470091 BABAM1Q9NWV8 329 aa17.51■□□□□ 0.39
LINC00173-201ENST00000470091 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
LINC00173-201ENST00000470091 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
LINC00173-201ENST00000470091 MAP1SQ66K74 1059 aaPredicted RBP17.5■□□□□ 0.39
LINC00173-201ENST00000470091 GPC2Q8N158 579 aa17.5■□□□□ 0.39
LINC00173-201ENST00000470091 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
LINC00173-201ENST00000470091 SUPT16HQ9Y5B9 1047 aaKnown RBP17.5■□□□□ 0.39
LINC00173-201ENST00000470091 CHL1O00533 1208 aa17.49■□□□□ 0.39
LINC00173-201ENST00000470091 ITGBL1O95965 494 aaPredicted RBP17.49■□□□□ 0.39
LINC00173-201ENST00000470091 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
LINC00173-201ENST00000470091 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
LINC00173-201ENST00000470091 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
LINC00173-201ENST00000470091 PASKQ96RG2 1323 aa17.48■□□□□ 0.39
LINC00173-201ENST00000470091 PNMA8AQ86V59 439 aaPredicted RBP17.48■□□□□ 0.39
LINC00173-201ENST00000470091 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
LINC00173-201ENST00000470091 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
LINC00173-201ENST00000470091 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
LINC00173-201ENST00000470091 IL16Q14005 1332 aa17.47■□□□□ 0.39
LINC00173-201ENST00000470091 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
LINC00173-201ENST00000470091 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
LINC00173-201ENST00000470091 TCIRG1Q13488 830 aa17.47■□□□□ 0.39
LINC00173-201ENST00000470091 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
LINC00173-201ENST00000470091 HSP90AB3PQ58FF7 597 aa17.47■□□□□ 0.39
LINC00173-201ENST00000470091 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00173-201ENST00000470091 ATP6V0A2Q9Y487 856 aa17.47■□□□□ 0.39
LINC00173-201ENST00000470091 LMOD1P29536 600 aaPredicted RBP17.46■□□□□ 0.39
LINC00173-201ENST00000470091 EPS15P42566 896 aa17.46■□□□□ 0.39
LINC00173-201ENST00000470091 AOC3Q16853 763 aa17.46■□□□□ 0.39
LINC00173-201ENST00000470091 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
LINC00173-201ENST00000470091 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
LINC00173-201ENST00000470091 CHPF2Q9P2E5 772 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms