RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 WWC1Q8IX03 1113 aa14.51□□□□□ -0.09
COL4A6-205ENST00000468338 PDZRN3Q9UPQ7 1066 aa14.51□□□□□ -0.09
COL4A6-205ENST00000468338 DLEC1Q9Y238 1755 aa14.51□□□□□ -0.09
COL4A6-205ENST00000468338 ATP10DQ9P241 1426 aa14.5□□□□□ -0.09
COL4A6-205ENST00000468338 MYL6BP14649 208 aa14.5□□□□□ -0.09
COL4A6-205ENST00000468338 DDX21Q9NR30 783 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL4A6-205ENST00000468338 WWC3Q9ULE0 1092 aa14.5□□□□□ -0.09
COL4A6-205ENST00000468338 KLRG2A4D1S0 409 aaPredicted RBP14.49□□□□□ -0.09
COL4A6-205ENST00000468338 DUSP27Q5VZP5 1158 aa14.49□□□□□ -0.09
COL4A6-205ENST00000468338 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
COL4A6-205ENST00000468338 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
COL4A6-205ENST00000468338 NIP7Q9Y221 180 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL4A6-205ENST00000468338 BCS1LQ9Y276 419 aa14.49□□□□□ -0.09
COL4A6-205ENST00000468338 IL16Q14005 1332 aa14.48□□□□□ -0.09
COL4A6-205ENST00000468338 ANXA1P04083 346 aa14.48□□□□□ -0.09
COL4A6-205ENST00000468338 DALRD3Q5D0E6 543 aaKnown RBP14.48□□□□□ -0.09
COL4A6-205ENST00000468338 GIGYF2Q6Y7W6 1299 aaKnown RBP14.48□□□□□ -0.09
COL4A6-205ENST00000468338 KIF6Q6ZMV9 814 aa14.48□□□□□ -0.09
COL4A6-205ENST00000468338 ZNF34Q8IZ26 560 aa14.48□□□□□ -0.09
COL4A6-205ENST00000468338 ZNF784Q8NCA9 323 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-205ENST00000468338 H0YIN7 160 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 PDE6BP35913 854 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 HDGFL1Q5TGJ6 251 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 TPTE2Q6XPS3 522 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.47□□□□□ -0.09
COL4A6-205ENST00000468338 COPS6Q7L5N1 327 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
COL4A6-205ENST00000468338 C2CD5Q86YS7 1000 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 ADCY9O60503 1353 aa14.47□□□□□ -0.09
COL4A6-205ENST00000468338 ST5P78524 1137 aa14.46□□□□□ -0.09
COL4A6-205ENST00000468338 CCDC24Q8N4L8 307 aa14.46□□□□□ -0.09
COL4A6-205ENST00000468338 C8orf58Q8NAV2 365 aa14.46□□□□□ -0.09
COL4A6-205ENST00000468338 XAGE3Q8WTP9 111 aa14.46□□□□□ -0.09
COL4A6-205ENST00000468338 ZBTB3Q9H5J0 574 aa14.46□□□□□ -0.09
COL4A6-205ENST00000468338 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.09
COL4A6-205ENST00000468338 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
COL4A6-205ENST00000468338 IBTKQ9P2D0 1353 aaPredicted RBP14.46□□□□□ -0.1
COL4A6-205ENST00000468338 UBN2Q6ZU65 1347 aa14.45□□□□□ -0.1
COL4A6-205ENST00000468338 SRGNP10124 158 aa14.45□□□□□ -0.1
COL4A6-205ENST00000468338 COL11A2P13942 1736 aaPredicted RBP14.45□□□□□ -0.1
COL4A6-205ENST00000468338 WDR63Q8IWG1 891 aa14.45□□□□□ -0.1
COL4A6-205ENST00000468338 TTLL6Q8N841 843 aa14.45□□□□□ -0.1
COL4A6-205ENST00000468338 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
COL4A6-205ENST00000468338 FAM9BQ8IZU0 186 aa14.44□□□□□ -0.1
COL4A6-205ENST00000468338 HYPKQ9NX55 129 aa14.44□□□□□ -0.1
COL4A6-205ENST00000468338 RIC1Q4ADV7 1423 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 SENP3-EIF4A1A0A087X0R7 540 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 TMEM132AQ24JP5 1023 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 SUSD4Q5VX71 490 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 STYK1Q6J9G0 422 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 ARHGAP27Q6ZUM4 889 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 TSPYL6Q8N831 410 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 TSR2Q969E8 191 aaKnown RBP14.43□□□□□ -0.1
COL4A6-205ENST00000468338 NYXQ9GZU5 481 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 SBF1O95248 1867 aa14.43□□□□□ -0.1
COL4A6-205ENST00000468338 ELL2O00472 640 aaPredicted RBP14.42□□□□□ -0.1
COL4A6-205ENST00000468338 NTSR2O95665 410 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 GPTP24298 496 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 TCIRG1Q13488 830 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 CRY2Q49AN0 593 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 HSP90AB3PQ58FF7 597 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 IFNL1Q8IU54 200 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 PLBD2Q8NHP8 589 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 MASTLQ96GX5 879 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 CHMP4AQ9BY43 222 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 ANKRD36CQ5JPF3 1778 aa14.42□□□□□ -0.1
COL4A6-205ENST00000468338 SLX4Q8IY92 1834 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 CCER2I3L3R5 266 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 NPHP1O15259 732 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 AIMP1Q12904 312 aaKnown RBP14.41□□□□□ -0.1
COL4A6-205ENST00000468338 SLC10A5Q5PT55 438 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 ANKRD13DQ6ZTN6 518 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 ERICH6Q7L0X2 663 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 CNKSR1Q969H4 720 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 ABCC12Q96J65 1359 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 ARFGEF2Q9Y6D5 1785 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
COL4A6-205ENST00000468338 FAM177BA6PVY3 158 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 NPR1P16066 1061 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 ERFEQ4G0M1 354 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 PPP1R42Q7Z4L9 355 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 NLRP10Q86W26 655 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 NUTM1Q86Y26 1132 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 C7orf43Q8WVR3 580 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 ZNF622Q969S3 477 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL4A6-205ENST00000468338 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
COL4A6-205ENST00000468338 GTF2E1P29083 439 aaPredicted RBP14.39□□□□□ -0.11
COL4A6-205ENST00000468338 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL4A6-205ENST00000468338 TRIM28Q13263 835 aaKnown RBP14.39□□□□□ -0.11
COL4A6-205ENST00000468338 E2F4Q16254 413 aa14.39□□□□□ -0.11
COL4A6-205ENST00000468338 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
COL4A6-205ENST00000468338 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
COL4A6-205ENST00000468338 FER1L6Q2WGJ9 1857 aa14.39□□□□□ -0.11
COL4A6-205ENST00000468338 TNRC6CQ9HCJ0 1690 aaKnown RBP14.39□□□□□ -0.11
COL4A6-205ENST00000468338 FANCIQ9NVI1 1328 aa14.39□□□□□ -0.11
COL4A6-205ENST00000468338 CACNA1FO60840 1977 aa14.38□□□□□ -0.11
COL4A6-205ENST00000468338 NFKBIEO00221 500 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms