RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 SCN4AP35499 1836 aa17.49■□□□□ 0.39
C9orf3-212ENST00000468164 NTSR2O95665 410 aa17.49■□□□□ 0.39
C9orf3-212ENST00000468164 FSTL1Q12841 308 aa17.49■□□□□ 0.39
C9orf3-212ENST00000468164 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
C9orf3-212ENST00000468164 SMC1BQ8NDV3 1235 aa17.49■□□□□ 0.39
C9orf3-212ENST00000468164 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-212ENST00000468164 DDX60Q8IY21 1712 aaKnown RBP17.48■□□□□ 0.39
C9orf3-212ENST00000468164 DDNO94850 711 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-212ENST00000468164 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■■□□□ 13.3
C9orf3-212ENST00000468164 PARP10Q53GL7 1025 aa17.48■□□□□ 0.39
C9orf3-212ENST00000468164 UTP14AQ9BVJ6 771 aaKnown RBP17.48■□□□□ 0.39
C9orf3-212ENST00000468164 DDX21Q9NR30 783 aaKnown RBP eCLIP17.48■□□□□ 0.39
C9orf3-212ENST00000468164 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
C9orf3-212ENST00000468164 C3orf67Q6ZVT6 689 aa17.47■□□□□ 0.39
C9orf3-212ENST00000468164 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
C9orf3-212ENST00000468164 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
C9orf3-212ENST00000468164 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
C9orf3-212ENST00000468164 MBIPQ9NS73 344 aa17.47■□□□□ 0.39
C9orf3-212ENST00000468164 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
C9orf3-212ENST00000468164 POTECB2RU33 542 aa17.46■□□□□ 0.39
C9orf3-212ENST00000468164 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
C9orf3-212ENST00000468164 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
C9orf3-212ENST00000468164 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
C9orf3-212ENST00000468164 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-212ENST00000468164 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
C9orf3-212ENST00000468164 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
C9orf3-212ENST00000468164 TRMT112Q9UI30 125 aaKnown RBP17.45■□□□□ 0.38
C9orf3-212ENST00000468164 PPEF1O14829 653 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-212ENST00000468164 HCLS1P14317 486 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-212ENST00000468164 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
C9orf3-212ENST00000468164 SLC51AQ86UW1 340 aa17.44■□□□□ 0.38
C9orf3-212ENST00000468164 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
C9orf3-212ENST00000468164 DBF4Q9UBU7 674 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-212ENST00000468164 HOXA10P31260 410 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-212ENST00000468164 GNAI1P63096 354 aa17.43■□□□□ 0.38
C9orf3-212ENST00000468164 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
C9orf3-212ENST00000468164 TCIRG1Q13488 830 aa17.43■□□□□ 0.38
C9orf3-212ENST00000468164 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-212ENST00000468164 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
C9orf3-212ENST00000468164 HOXB7P09629 217 aa17.42■□□□□ 0.38
C9orf3-212ENST00000468164 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
C9orf3-212ENST00000468164 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
C9orf3-212ENST00000468164 IFT57Q9NWB7 429 aa17.42■□□□□ 0.38
C9orf3-212ENST00000468164 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
C9orf3-212ENST00000468164 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
C9orf3-212ENST00000468164 CC2D2BQ6DHV5 1058 aa17.41■□□□□ 0.38
C9orf3-212ENST00000468164 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
C9orf3-212ENST00000468164 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
C9orf3-212ENST00000468164 PCNTO95613 3336 aa17.41■□□□□ 0.38
C9orf3-212ENST00000468164 ABCC4O15439 1325 aa17.41■□□□□ 0.38
C9orf3-212ENST00000468164 SH3TC1Q8TE82 1336 aa17.41■□□□□ 0.38
C9orf3-212ENST00000468164 IQCA1LA6NCM1 817 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 POTEIP0CG38 1075 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 POTEJP0CG39 1038 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 SLC10A5Q5PT55 438 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 DNAJC5GQ8N7S2 189 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 PLBD2Q8NHP8 589 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 PSMD1Q99460 953 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
C9orf3-212ENST00000468164 SNED1Q8TER0 1413 aa17.39■□□□□ 0.38
C9orf3-212ENST00000468164 COL4A5P29400 1685 aa17.39■□□□□ 0.37
C9orf3-212ENST00000468164 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
C9orf3-212ENST00000468164 EAPPQ56P03 285 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-212ENST00000468164 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
C9orf3-212ENST00000468164 LARGE2Q8N3Y3 721 aa17.39■□□□□ 0.37
C9orf3-212ENST00000468164 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
C9orf3-212ENST00000468164 ZNF316A6NFI3 1004 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-212ENST00000468164 ANP32CO43423 234 aa17.38■□□□□ 0.37
C9orf3-212ENST00000468164 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
C9orf3-212ENST00000468164 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
C9orf3-212ENST00000468164 PHAXQ9H814 394 aaKnown RBP17.38■□□□□ 0.37
C9orf3-212ENST00000468164 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
C9orf3-212ENST00000468164 CLEC11AQ9Y240 323 aa17.38■□□□□ 0.37
C9orf3-212ENST00000468164 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
C9orf3-212ENST00000468164 MYH3P11055 1940 aa17.37■□□□□ 0.37
C9orf3-212ENST00000468164 EIF6P56537 245 aaKnown RBP17.37■□□□□ 0.37
C9orf3-212ENST00000468164 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
C9orf3-212ENST00000468164 C8orf58Q8NAV2 365 aa17.37■□□□□ 0.37
C9orf3-212ENST00000468164 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
C9orf3-212ENST00000468164 KLRG1Q96E93 195 aa17.37■□□□□ 0.37
C9orf3-212ENST00000468164 FAM89AQ96GI7 184 aa17.37■□□□□ 0.37
C9orf3-212ENST00000468164 FZD9O00144 591 aa17.36■□□□□ 0.37
C9orf3-212ENST00000468164 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
C9orf3-212ENST00000468164 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
C9orf3-212ENST00000468164 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-212ENST00000468164 TAF1DQ9H5J8 278 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-212ENST00000468164 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
C9orf3-212ENST00000468164 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
C9orf3-212ENST00000468164 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
C9orf3-212ENST00000468164 CACNA1FO60840 1977 aa17.35■□□□□ 0.37
C9orf3-212ENST00000468164 AOC3Q16853 763 aa17.35■□□□□ 0.37
C9orf3-212ENST00000468164 NIM1KQ8IY84 436 aa17.35■□□□□ 0.37
C9orf3-212ENST00000468164 GPC2Q8N158 579 aa17.35■□□□□ 0.37
C9orf3-212ENST00000468164 ISCA1Q9BUE6 129 aa17.35■□□□□ 0.37
C9orf3-212ENST00000468164 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-212ENST00000468164 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
C9orf3-212ENST00000468164 EPHX2P34913 555 aa17.34■□□□□ 0.37
C9orf3-212ENST00000468164 DPP8Q6V1X1 898 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-212ENST00000468164 MYD88Q99836 296 aa17.34■□□□□ 0.37
C9orf3-212ENST00000468164 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms