RNA–Protein interactions for RNA: ENST00000467998.1

CGN-205, Transcript of cingulin, humanhuman

TSL 2

Gene CGN, Length 930 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-205ENST00000467998 POTEJP0CG39 1038 aa17.49■□□□□ 0.39
CGN-205ENST00000467998 HOXA10P31260 410 aaPredicted RBP17.49■□□□□ 0.39
CGN-205ENST00000467998 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
CGN-205ENST00000467998 RBM17Q96I25 401 aaKnown RBP17.49■□□□□ 0.39
CGN-205ENST00000467998 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
CGN-205ENST00000467998 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
CGN-205ENST00000467998 NECTIN2Q92692 538 aa17.48■□□□□ 0.39
CGN-205ENST00000467998 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
CGN-205ENST00000467998 PSMD1Q99460 953 aa17.48■□□□□ 0.39
CGN-205ENST00000467998 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
CGN-205ENST00000467998 FZD9O00144 591 aa17.47■□□□□ 0.39
CGN-205ENST00000467998 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
CGN-205ENST00000467998 LDHDQ86WU2 507 aa17.47■□□□□ 0.39
CGN-205ENST00000467998 JDP2Q8WYK2 163 aa17.47■□□□□ 0.39
CGN-205ENST00000467998 CRAMP1Q96RY5 1269 aa17.47■□□□□ 0.39
CGN-205ENST00000467998 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
CGN-205ENST00000467998 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
CGN-205ENST00000467998 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
CGN-205ENST00000467998 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
CGN-205ENST00000467998 CHL1O00533 1208 aa17.46■□□□□ 0.39
CGN-205ENST00000467998 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.39
CGN-205ENST00000467998 COPS6Q7L5N1 327 aa17.46■□□□□ 0.39
CGN-205ENST00000467998 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
CGN-205ENST00000467998 HACL1Q9UJ83 578 aa17.46■□□□□ 0.39
CGN-205ENST00000467998 PCNTO95613 3336 aa17.45■□□□□ 0.38
CGN-205ENST00000467998 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
CGN-205ENST00000467998 PPEF1O14829 653 aaPredicted RBP17.45■□□□□ 0.38
CGN-205ENST00000467998 HSP90AB3PQ58FF7 597 aa17.45■□□□□ 0.38
CGN-205ENST00000467998 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
CGN-205ENST00000467998 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
CGN-205ENST00000467998 XAGE3Q8WTP9 111 aa17.45■□□□□ 0.38
CGN-205ENST00000467998 TRIM35Q9UPQ4 493 aa17.45■□□□□ 0.38
CGN-205ENST00000467998 SCN4AP35499 1836 aa17.44■□□□□ 0.38
CGN-205ENST00000467998 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
CGN-205ENST00000467998 EAPPQ56P03 285 aaPredicted RBP17.44■□□□□ 0.38
CGN-205ENST00000467998 GPC2Q8N158 579 aa17.44■□□□□ 0.38
CGN-205ENST00000467998 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
CGN-205ENST00000467998 DDX21Q9NR30 783 aaKnown RBP eCLIP17.44■□□□□ 0.38
CGN-205ENST00000467998 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
CGN-205ENST00000467998 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
CGN-205ENST00000467998 EPHX2P34913 555 aa17.43■□□□□ 0.38
CGN-205ENST00000467998 EIF6P56537 245 aaKnown RBP17.43■□□□□ 0.38
CGN-205ENST00000467998 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
CGN-205ENST00000467998 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
CGN-205ENST00000467998 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
CGN-205ENST00000467998 LARGE2Q8N3Y3 721 aa17.42■□□□□ 0.38
CGN-205ENST00000467998 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
CGN-205ENST00000467998 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
CGN-205ENST00000467998 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
CGN-205ENST00000467998 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
CGN-205ENST00000467998 ATP6V0A2Q9Y487 856 aa17.41■□□□□ 0.38
CGN-205ENST00000467998 GJA3Q9Y6H8 435 aa17.41■□□□□ 0.38
CGN-205ENST00000467998 PASKQ96RG2 1323 aa17.41■□□□□ 0.38
CGN-205ENST00000467998 HOXB7P09629 217 aa17.4■□□□□ 0.38
CGN-205ENST00000467998 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
CGN-205ENST00000467998 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
CGN-205ENST00000467998 SLC51AQ86UW1 340 aa17.4■□□□□ 0.38
CGN-205ENST00000467998 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
CGN-205ENST00000467998 BBOX1O75936 387 aa17.39■□□□□ 0.37
CGN-205ENST00000467998 ITGBL1O95965 494 aaPredicted RBP17.39■□□□□ 0.37
CGN-205ENST00000467998 HSPA1AP0DMV8 641 aaKnown RBP17.39■□□□□ 0.37
CGN-205ENST00000467998 HSPA1BP0DMV9 641 aaKnown RBP17.39■□□□□ 0.37
CGN-205ENST00000467998 COL13A1Q5TAT6 717 aaPredicted RBP17.39■□□□□ 0.37
CGN-205ENST00000467998 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
CGN-205ENST00000467998 MKRN1Q9UHC7 482 aaKnown RBP17.39■□□□□ 0.37
CGN-205ENST00000467998 ABCC4O15439 1325 aa17.39■□□□□ 0.37
CGN-205ENST00000467998 COL4A5P29400 1685 aa17.39■□□□□ 0.37
CGN-205ENST00000467998 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
CGN-205ENST00000467998 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
CGN-205ENST00000467998 NIM1KQ8IY84 436 aa17.38■□□□□ 0.37
CGN-205ENST00000467998 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
CGN-205ENST00000467998 DBF4Q9UBU7 674 aaPredicted RBP17.38■□□□□ 0.37
CGN-205ENST00000467998 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
CGN-205ENST00000467998 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
CGN-205ENST00000467998 AOC3Q16853 763 aa17.37■□□□□ 0.37
CGN-205ENST00000467998 ANKRD13DQ6ZTN6 518 aa17.37■□□□□ 0.37
CGN-205ENST00000467998 DDX46Q7L014 1031 aaKnown RBP17.37■□□□□ 0.37
CGN-205ENST00000467998 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
CGN-205ENST00000467998 VPS33BQ9H267 617 aa17.37■□□□□ 0.37
CGN-205ENST00000467998 TMEM88BA6NKF7 163 aa17.36■□□□□ 0.37
CGN-205ENST00000467998 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
CGN-205ENST00000467998 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
CGN-205ENST00000467998 SP8Q8IXZ3 490 aa17.36■□□□□ 0.37
CGN-205ENST00000467998 SUPT20HQ8NEM7 779 aa17.36■□□□□ 0.37
CGN-205ENST00000467998 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
CGN-205ENST00000467998 APAF1O14727 1248 aa17.35■□□□□ 0.37
CGN-205ENST00000467998 SCNN1DP51172 638 aa17.35■□□□□ 0.37
CGN-205ENST00000467998 DPP8Q6V1X1 898 aaPredicted RBP17.35■□□□□ 0.37
CGN-205ENST00000467998 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
CGN-205ENST00000467998 RTFDC1Q9BY42 306 aaPredicted RBP17.35■□□□□ 0.37
CGN-205ENST00000467998 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
CGN-205ENST00000467998 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
CGN-205ENST00000467998 CNTNAP1P78357 1384 aa17.35■□□□□ 0.37
CGN-205ENST00000467998 EPS15P42566 896 aa17.34■□□□□ 0.37
CGN-205ENST00000467998 GRAPQ13588 217 aa17.34■□□□□ 0.37
CGN-205ENST00000467998 MPNDQ8N594 471 aa17.34■□□□□ 0.37
CGN-205ENST00000467998 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
CGN-205ENST00000467998 ISCA1Q9BUE6 129 aa17.34■□□□□ 0.37
CGN-205ENST00000467998 LAMB2P55268 1798 aa17.33■□□□□ 0.37
CGN-205ENST00000467998 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms