RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 PSMD1Q99460 953 aa22.69■■□□□ 1.22
TRIM56-203ENST00000467847 SNED1Q8TER0 1413 aa22.68■■□□□ 1.22
TRIM56-203ENST00000467847 FOXN1O15353 648 aa22.68■■□□□ 1.22
TRIM56-203ENST00000467847 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
TRIM56-203ENST00000467847 HOXA10P31260 410 aaPredicted RBP22.68■■□□□ 1.22
TRIM56-203ENST00000467847 EAPPQ56P03 285 aaPredicted RBP22.68■■□□□ 1.22
TRIM56-203ENST00000467847 CC2D2BQ6DHV5 1058 aa22.68■■□□□ 1.22
TRIM56-203ENST00000467847 HACL1Q9UJ83 578 aa22.68■■□□□ 1.22
TRIM56-203ENST00000467847 FZD9O00144 591 aa22.67■■□□□ 1.22
TRIM56-203ENST00000467847 NTSR2O95665 410 aa22.67■■□□□ 1.22
TRIM56-203ENST00000467847 LMOD3Q0VAK6 560 aa22.67■■□□□ 1.22
TRIM56-203ENST00000467847 JDP2Q8WYK2 163 aa22.67■■□□□ 1.22
TRIM56-203ENST00000467847 RBM17Q96I25 401 aaKnown RBP22.67■■□□□ 1.22
TRIM56-203ENST00000467847 PRDM10Q9NQV6 1147 aa22.67■■□□□ 1.22
TRIM56-203ENST00000467847 TMPOP42166 694 aaKnown RBP22.66■■□□□ 1.22
TRIM56-203ENST00000467847 PDIA6Q15084 440 aa22.66■■□□□ 1.22
TRIM56-203ENST00000467847 PARP10Q53GL7 1025 aa22.66■■□□□ 1.22
TRIM56-203ENST00000467847 PPP1R42Q7Z4L9 355 aa22.66■■□□□ 1.22
TRIM56-203ENST00000467847 BABAM1Q9NWV8 329 aa22.66■■□□□ 1.22
TRIM56-203ENST00000467847 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
TRIM56-203ENST00000467847 EPHX2P34913 555 aa22.65■■□□□ 1.22
TRIM56-203ENST00000467847 CTCFP49711 727 aaPredicted RBP22.65■■□□□ 1.22
TRIM56-203ENST00000467847 LRP10Q7Z4F1 713 aa22.65■■□□□ 1.22
TRIM56-203ENST00000467847 GPC2Q8N158 579 aa22.65■■□□□ 1.22
TRIM56-203ENST00000467847 CRAMP1Q96RY5 1269 aa22.65■■□□□ 1.22
TRIM56-203ENST00000467847 CNTNAP1P78357 1384 aa22.64■■□□□ 1.22
TRIM56-203ENST00000467847 PASKQ96RG2 1323 aa22.64■■□□□ 1.22
TRIM56-203ENST00000467847 PPEF1O14829 653 aaPredicted RBP22.64■■□□□ 1.21
TRIM56-203ENST00000467847 PROSER3Q2NL68 480 aa22.64■■□□□ 1.21
TRIM56-203ENST00000467847 GRIPAP1Q4V328 841 aa22.64■■□□□ 1.21
TRIM56-203ENST00000467847 CLEC11AQ9Y240 323 aa22.64■■□□□ 1.21
TRIM56-203ENST00000467847 ANKRD36CQ5JPF3 1778 aa22.63■■□□□ 1.21
TRIM56-203ENST00000467847 ADAMTSL1Q8N6G6 1762 aa22.63■■□□□ 1.21
TRIM56-203ENST00000467847 TCERG1O14776 1098 aaKnown RBP22.63■■□□□ 1.21
TRIM56-203ENST00000467847 ANXA1P04083 346 aa22.63■■□□□ 1.21
TRIM56-203ENST00000467847 C3orf67Q6ZVT6 689 aa22.63■■□□□ 1.21
TRIM56-203ENST00000467847 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
TRIM56-203ENST00000467847 COL4A5P29400 1685 aa22.62■■□□□ 1.21
TRIM56-203ENST00000467847 EIF6P56537 245 aaKnown RBP22.62■■□□□ 1.21
TRIM56-203ENST00000467847 PNMA8AQ86V59 439 aaPredicted RBP22.62■■□□□ 1.21
TRIM56-203ENST00000467847 NECTIN2Q92692 538 aa22.62■■□□□ 1.21
TRIM56-203ENST00000467847 NLRP3Q96P20 1036 aa22.62■■□□□ 1.21
TRIM56-203ENST00000467847 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
TRIM56-203ENST00000467847 NEUROD2Q15784 382 aa22.61■■□□□ 1.21
TRIM56-203ENST00000467847 SLC51AQ86UW1 340 aa22.61■■□□□ 1.21
TRIM56-203ENST00000467847 CCDC146Q8IYE0 955 aa22.61■■□□□ 1.21
TRIM56-203ENST00000467847 LARGE2Q8N3Y3 721 aa22.61■■□□□ 1.21
TRIM56-203ENST00000467847 GJA3Q9Y6H8 435 aa22.61■■□□□ 1.21
TRIM56-203ENST00000467847 ITGBL1O95965 494 aaPredicted RBP22.6■■□□□ 1.21
TRIM56-203ENST00000467847 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
TRIM56-203ENST00000467847 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
TRIM56-203ENST00000467847 TMX4Q9H1E5 349 aaPredicted RBP22.6■■□□□ 1.21
TRIM56-203ENST00000467847 TMEM88BA6NKF7 163 aa22.59■■□□□ 1.21
TRIM56-203ENST00000467847 COPS6Q7L5N1 327 aa22.59■■□□□ 1.21
TRIM56-203ENST00000467847 LAMB2P55268 1798 aa22.58■■□□□ 1.21
TRIM56-203ENST00000467847 VEGFBP49765 207 aa22.58■■□□□ 1.21
TRIM56-203ENST00000467847 HSP90AB3PQ58FF7 597 aa22.58■■□□□ 1.21
TRIM56-203ENST00000467847 SLC10A5Q5PT55 438 aa22.58■■□□□ 1.21
TRIM56-203ENST00000467847 XAGE3Q8WTP9 111 aa22.58■■□□□ 1.21
TRIM56-203ENST00000467847 LMOD1P29536 600 aaPredicted RBP22.57■■□□□ 1.2
TRIM56-203ENST00000467847 WDR43Q15061 677 aaKnown RBP eCLIP22.57■■□□□ 1.2
TRIM56-203ENST00000467847 MAP1SQ66K74 1059 aaPredicted RBP22.57■■□□□ 1.2
TRIM56-203ENST00000467847 CNTROBQ8N137 903 aa22.57■■□□□ 1.2
TRIM56-203ENST00000467847 LAS1LQ9Y4W2 734 aaKnown RBP22.57■■□□□ 1.2
TRIM56-203ENST00000467847 ABCC4O15439 1325 aa22.57■■□□□ 1.2
TRIM56-203ENST00000467847 CHL1O00533 1208 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 SLC34A2O95436 690 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 LBX1P52954 281 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 KRT24Q2M2I5 525 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 NLRP10Q86W26 655 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 NIM1KQ8IY84 436 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 DDX21Q9NR30 783 aaKnown RBP eCLIP22.56■■□□□ 1.2
TRIM56-203ENST00000467847 ATP6V0A2Q9Y487 856 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 LTBP1Q14766 1721 aa22.56■■□□□ 1.2
TRIM56-203ENST00000467847 PPIP5K2O43314 1243 aa22.55■■□□□ 1.2
TRIM56-203ENST00000467847 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
TRIM56-203ENST00000467847 AOC3Q16853 763 aa22.54■■□□□ 1.2
TRIM56-203ENST00000467847 TRMT112Q9UI30 125 aaKnown RBP22.54■■□□□ 1.2
TRIM56-203ENST00000467847 TRIM35Q9UPQ4 493 aa22.54■■□□□ 1.2
TRIM56-203ENST00000467847 SCNN1DP51172 638 aa22.53■■□□□ 1.2
TRIM56-203ENST00000467847 TCIRG1Q13488 830 aa22.53■■□□□ 1.2
TRIM56-203ENST00000467847 WBP1LQ9NX94 342 aa22.53■■□□□ 1.2
TRIM56-203ENST00000467847 CHPF2Q9P2E5 772 aa22.53■■□□□ 1.2
TRIM56-203ENST00000467847 BBOX1O75936 387 aa22.52■■□□□ 1.2
TRIM56-203ENST00000467847 EPS15P42566 896 aa22.52■■□□□ 1.2
TRIM56-203ENST00000467847 SUPT20HQ8NEM7 779 aa22.52■■□□□ 1.2
TRIM56-203ENST00000467847 VPS33BQ9H267 617 aa22.52■■□□□ 1.2
TRIM56-203ENST00000467847 SH3TC1Q8TE82 1336 aa22.52■■□□□ 1.2
TRIM56-203ENST00000467847 FAM161AQ3B820 660 aa22.51■■□□□ 1.19
TRIM56-203ENST00000467847 HDGFL1Q5TGJ6 251 aa22.51■■□□□ 1.19
TRIM56-203ENST00000467847 DPP8Q6V1X1 898 aaPredicted RBP22.51■■□□□ 1.19
TRIM56-203ENST00000467847 DDX46Q7L014 1031 aaKnown RBP22.51■■□□□ 1.19
TRIM56-203ENST00000467847 ABHD8Q96I13 439 aa22.51■■□□□ 1.19
TRIM56-203ENST00000467847 ADAMTS8Q9UP79 889 aa22.51■■□□□ 1.19
TRIM56-203ENST00000467847 TAF1P21675 1872 aa22.51■■□□□ 1.19
TRIM56-203ENST00000467847 DEFB115Q30KQ5 88 aa22.5■■□□□ 1.19
TRIM56-203ENST00000467847 SP8Q8IXZ3 490 aa22.5■■□□□ 1.19
TRIM56-203ENST00000467847 RTFDC1Q9BY42 306 aaPredicted RBP22.5■■□□□ 1.19
TRIM56-203ENST00000467847 USP50Q70EL3 339 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms