RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 ANKRD36CQ5JPF3 1778 aa18.86■□□□□ 0.61
RB1-202ENST00000467505 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
RB1-202ENST00000467505 SUSD4Q5VX71 490 aa18.85■□□□□ 0.61
RB1-202ENST00000467505 LDHDQ86WU2 507 aa18.85■□□□□ 0.61
RB1-202ENST00000467505 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
RB1-202ENST00000467505 NLRP3Q96P20 1036 aa18.85■□□□□ 0.61
RB1-202ENST00000467505 NTSR2O95665 410 aa18.84■□□□□ 0.61
RB1-202ENST00000467505 RUNDC1Q96C34 613 aa18.84■□□□□ 0.61
RB1-202ENST00000467505 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
RB1-202ENST00000467505 TAF1DQ9H5J8 278 aaPredicted RBP18.84■□□□□ 0.61
RB1-202ENST00000467505 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
RB1-202ENST00000467505 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.6
RB1-202ENST00000467505 CREBZFQ9NS37 354 aa18.83■□□□□ 0.6
RB1-202ENST00000467505 HACL1Q9UJ83 578 aa18.83■□□□□ 0.6
RB1-202ENST00000467505 ZNF541Q9H0D2 1346 aa18.82■□□□□ 0.6
RB1-202ENST00000467505 FZD9O00144 591 aa18.82■□□□□ 0.6
RB1-202ENST00000467505 EIF6P56537 245 aaKnown RBP18.82■□□□□ 0.6
RB1-202ENST00000467505 PDIA6Q15084 440 aa18.82■□□□□ 0.6
RB1-202ENST00000467505 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
RB1-202ENST00000467505 PNMA8AQ86V59 439 aaPredicted RBP18.82■□□□□ 0.6
RB1-202ENST00000467505 GPC2Q8N158 579 aa18.82■□□□□ 0.6
RB1-202ENST00000467505 PPEF1O14829 653 aaPredicted RBP18.81■□□□□ 0.6
RB1-202ENST00000467505 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
RB1-202ENST00000467505 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
RB1-202ENST00000467505 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
RB1-202ENST00000467505 EAPPQ56P03 285 aaPredicted RBP18.8■□□□□ 0.6
RB1-202ENST00000467505 DDX21Q9NR30 783 aaKnown RBP eCLIP18.8■□□□□ 0.6
RB1-202ENST00000467505 CHL1O00533 1208 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 POTEIP0CG38 1075 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 POTEJP0CG39 1038 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 EPHX2P34913 555 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 SLC10A5Q5PT55 438 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 COPS6Q7L5N1 327 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 LARGE2Q8N3Y3 721 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 CLEC11AQ9Y240 323 aa18.79■□□□□ 0.6
RB1-202ENST00000467505 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
RB1-202ENST00000467505 ANXA1P04083 346 aa18.78■□□□□ 0.6
RB1-202ENST00000467505 HOXB7P09629 217 aa18.78■□□□□ 0.6
RB1-202ENST00000467505 LMOD1P29536 600 aaPredicted RBP18.78■□□□□ 0.6
RB1-202ENST00000467505 AIMP1Q12904 312 aaKnown RBP18.78■□□□□ 0.6
RB1-202ENST00000467505 PROSER3Q2NL68 480 aa18.78■□□□□ 0.6
RB1-202ENST00000467505 XAGE3Q8WTP9 111 aa18.78■□□□□ 0.6
RB1-202ENST00000467505 NECTIN2Q92692 538 aa18.78■□□□□ 0.6
RB1-202ENST00000467505 VPS33BQ9H267 617 aa18.78■□□□□ 0.6
RB1-202ENST00000467505 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
RB1-202ENST00000467505 LAMB2P55268 1798 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 TCIRG1Q13488 830 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 HDGFL1Q5TGJ6 251 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 NIM1KQ8IY84 436 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 ATP6V0A2Q9Y487 856 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 GJA3Q9Y6H8 435 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 ADAMTSL1Q8N6G6 1762 aa18.76■□□□□ 0.59
RB1-202ENST00000467505 SH3TC1Q8TE82 1336 aa18.75■□□□□ 0.59
RB1-202ENST00000467505 PASKQ96RG2 1323 aa18.75■□□□□ 0.59
RB1-202ENST00000467505 TCERG1O14776 1098 aaKnown RBP18.75■□□□□ 0.59
RB1-202ENST00000467505 BBOX1O75936 387 aa18.75■□□□□ 0.59
RB1-202ENST00000467505 HSPA1AP0DMV8 641 aaKnown RBP18.75■□□□□ 0.59
RB1-202ENST00000467505 HSPA1BP0DMV9 641 aaKnown RBP18.75■□□□□ 0.59
RB1-202ENST00000467505 DBF4Q9UBU7 674 aaPredicted RBP18.75■□□□□ 0.59
RB1-202ENST00000467505 TRMT112Q9UI30 125 aaKnown RBP18.75■□□□□ 0.59
RB1-202ENST00000467505 ADAMTS8Q9UP79 889 aa18.75■□□□□ 0.59
RB1-202ENST00000467505 TMEM88BA6NKF7 163 aa18.74■□□□□ 0.59
RB1-202ENST00000467505 PPIP5K2O43314 1243 aa18.74■□□□□ 0.59
RB1-202ENST00000467505 CALD1Q05682 793 aaKnown RBP18.74■□□□□ 0.59
RB1-202ENST00000467505 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
RB1-202ENST00000467505 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
RB1-202ENST00000467505 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
RB1-202ENST00000467505 ABCC4O15439 1325 aa18.74■□□□□ 0.59
RB1-202ENST00000467505 C3orf67Q6ZVT6 689 aa18.73■□□□□ 0.59
RB1-202ENST00000467505 PLBD2Q8NHP8 589 aa18.73■□□□□ 0.59
RB1-202ENST00000467505 CHPF2Q9P2E5 772 aa18.73■□□□□ 0.59
RB1-202ENST00000467505 CNTNAP1P78357 1384 aa18.72■□□□□ 0.59
RB1-202ENST00000467505 ITGBL1O95965 494 aaPredicted RBP18.72■□□□□ 0.59
RB1-202ENST00000467505 DPP8Q6V1X1 898 aaPredicted RBP18.72■□□□□ 0.59
RB1-202ENST00000467505 ANKRD13DQ6ZTN6 518 aa18.72■□□□□ 0.59
RB1-202ENST00000467505 TMC4Q7Z404 712 aa18.72■□□□□ 0.59
RB1-202ENST00000467505 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
RB1-202ENST00000467505 CNTROBQ8N137 903 aa18.72■□□□□ 0.59
RB1-202ENST00000467505 PRKRIP1Q9H875 184 aaPredicted RBP18.72■□□□□ 0.59
RB1-202ENST00000467505 HYPKQ9NX55 129 aa18.72■□□□□ 0.59
RB1-202ENST00000467505 COL4A5P29400 1685 aa18.71■□□□□ 0.59
RB1-202ENST00000467505 HCLS1P14317 486 aaPredicted RBP18.71■□□□□ 0.59
RB1-202ENST00000467505 KRT24Q2M2I5 525 aa18.71■□□□□ 0.59
RB1-202ENST00000467505 COL13A1Q5TAT6 717 aaPredicted RBP18.71■□□□□ 0.59
RB1-202ENST00000467505 MPNDQ8N594 471 aa18.71■□□□□ 0.59
RB1-202ENST00000467505 GRAPQ13588 217 aa18.7■□□□□ 0.58
RB1-202ENST00000467505 AOC3Q16853 763 aa18.7■□□□□ 0.58
RB1-202ENST00000467505 USP50Q70EL3 339 aaPredicted RBP18.7■□□□□ 0.58
RB1-202ENST00000467505 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
RB1-202ENST00000467505 GRAPLQ8TC17 118 aaPredicted RBP18.7■□□□□ 0.58
RB1-202ENST00000467505 RTFDC1Q9BY42 306 aaPredicted RBP18.7■□□□□ 0.58
RB1-202ENST00000467505 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
RB1-202ENST00000467505 ZNRF3Q9ULT6 936 aa18.7■□□□□ 0.58
RB1-202ENST00000467505 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
RB1-202ENST00000467505 MAP1SQ66K74 1059 aaPredicted RBP18.69■□□□□ 0.58
RB1-202ENST00000467505 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
RB1-202ENST00000467505 HSP90B1P14625 803 aaKnown RBP18.68■□□□□ 0.58
RB1-202ENST00000467505 SCNN1DP51172 638 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms