RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 USP17L18D6R9N7 530 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 USP17L22D6RA61 530 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 USP17L17D6RBQ6 530 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 USP17L19D6RCP7 530 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 USP17L20D6RJB6 530 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 M0R082 166 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 IGFBP4P22692 258 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 ADH7P40394 386 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 USP17L24Q0WX57 530 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 ZNF417Q8TAU3 575 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 ZNF587Q96SQ5 575 aaPredicted RBP9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 HINFPQ9BQA5 517 aa9.54□□□□□ -0.88
PRPF40A-205ENST00000467114 SPDYE3A6NKU9 549 aa9.53□□□□□ -0.88
PRPF40A-205ENST00000467114 RTN1Q16799 776 aa9.53□□□□□ -0.88
PRPF40A-205ENST00000467114 IER5Q5VY09 327 aa9.53□□□□□ -0.88
PRPF40A-205ENST00000467114 ANKMY2Q8IV38 441 aa9.53□□□□□ -0.88
PRPF40A-205ENST00000467114 MICALL1Q8N3F8 863 aa9.53□□□□□ -0.88
PRPF40A-205ENST00000467114 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
PRPF40A-205ENST00000467114 EFCC1Q9HA90 598 aa9.53□□□□□ -0.88
PRPF40A-205ENST00000467114 ALBP02768 609 aa9.52□□□□□ -0.89
PRPF40A-205ENST00000467114 FURINP09958 794 aa9.52□□□□□ -0.89
PRPF40A-205ENST00000467114 LMOD1P29536 600 aaPredicted RBP9.52□□□□□ -0.89
PRPF40A-205ENST00000467114 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.89
PRPF40A-205ENST00000467114 NGLY1Q96IV0 654 aa9.52□□□□□ -0.89
PRPF40A-205ENST00000467114 ARXQ96QS3 562 aa9.51□□□□□ -0.89
PRPF40A-205ENST00000467114 DMGDHQ9UI17 866 aaKnown RBP9.51□□□□□ -0.89
PRPF40A-205ENST00000467114 TGFBR3LH3BV60 316 aa9.5□□□□□ -0.89
PRPF40A-205ENST00000467114 BHMTQ93088 406 aa9.5□□□□□ -0.89
PRPF40A-205ENST00000467114 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
PRPF40A-205ENST00000467114 NID1P14543 1247 aa9.49□□□□□ -0.89
PRPF40A-205ENST00000467114 PRRT3Q5FWE3 981 aa9.49□□□□□ -0.89
PRPF40A-205ENST00000467114 C8orf86Q6ZUL3 223 aa9.49□□□□□ -0.89
PRPF40A-205ENST00000467114 GSX2Q9BZM3 304 aa9.49□□□□□ -0.89
PRPF40A-205ENST00000467114 LGR5O75473 907 aa9.48□□□□□ -0.89
PRPF40A-205ENST00000467114 WEE1P30291 646 aa9.47□□□□□ -0.89
PRPF40A-205ENST00000467114 CFAP70Q5T0N1 1121 aa9.47□□□□□ -0.89
PRPF40A-205ENST00000467114 GATA4P43694 442 aa9.46□□□□□ -0.9
PRPF40A-205ENST00000467114 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.9
PRPF40A-205ENST00000467114 SLC6A14Q9UN76 642 aa9.46□□□□□ -0.9
PRPF40A-205ENST00000467114 FOXO3O43524 673 aa9.45□□□□□ -0.9
PRPF40A-205ENST00000467114 GRNP28799 593 aaKnown RBP9.45□□□□□ -0.9
PRPF40A-205ENST00000467114 INPP5BP32019 993 aa9.45□□□□□ -0.9
PRPF40A-205ENST00000467114 CCINQ13939 588 aa9.45□□□□□ -0.9
PRPF40A-205ENST00000467114 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 LILRB5O75023 590 aa9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 APBA3O96018 575 aa9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 TRIM28Q13263 835 aaKnown RBP9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 DOC2BQ14184 412 aa9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 QTRT2Q9H974 415 aaKnown RBP9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 KLK14Q9P0G3 267 aa9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.44□□□□□ -0.9
PRPF40A-205ENST00000467114 EPB42P16452 691 aa9.43□□□□□ -0.9
PRPF40A-205ENST00000467114 MYO19Q96H55 970 aa9.43□□□□□ -0.9
PRPF40A-205ENST00000467114 C11orf16Q9NQ32 467 aa9.43□□□□□ -0.9
PRPF40A-205ENST00000467114 DNAJB12Q9NXW2 375 aaKnown RBP9.43□□□□□ -0.9
PRPF40A-205ENST00000467114 ZNF777Q9ULD5 760 aaPredicted RBP9.43□□□□□ -0.9
PRPF40A-205ENST00000467114 IDH3AP50213 366 aa9.42□□□□□ -0.9
PRPF40A-205ENST00000467114 TBC1D8BQ0IIM8 1120 aa9.42□□□□□ -0.9
PRPF40A-205ENST00000467114 DGKZQ13574 1117 aa9.42□□□□□ -0.9
PRPF40A-205ENST00000467114 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
PRPF40A-205ENST00000467114 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
PRPF40A-205ENST00000467114 NACC1Q96RE7 527 aa9.42□□□□□ -0.9
PRPF40A-205ENST00000467114 IGFLR1Q9H665 355 aa9.42□□□□□ -0.9
PRPF40A-205ENST00000467114 NFKB1P19838 968 aa9.41□□□□□ -0.9
PRPF40A-205ENST00000467114 ITGB7P26010 798 aa9.41□□□□□ -0.9
PRPF40A-205ENST00000467114 NAGPAQ9UK23 515 aa9.41□□□□□ -0.9
PRPF40A-205ENST00000467114 MAP3K6O95382 1288 aa9.4□□□□□ -0.9
PRPF40A-205ENST00000467114 ARSDP51689 593 aa9.4□□□□□ -0.9
PRPF40A-205ENST00000467114 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
PRPF40A-205ENST00000467114 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
PRPF40A-205ENST00000467114 ILDR2Q71H61 639 aa9.4□□□□□ -0.9
PRPF40A-205ENST00000467114 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
PRPF40A-205ENST00000467114 AFF1P51825 1210 aaKnown RBP9.39□□□□□ -0.91
PRPF40A-205ENST00000467114 GRIK4Q16099 956 aa9.39□□□□□ -0.91
PRPF40A-205ENST00000467114 XP32Q5T750 250 aa9.39□□□□□ -0.91
PRPF40A-205ENST00000467114 PSAPL1Q6NUJ1 521 aa9.39□□□□□ -0.91
PRPF40A-205ENST00000467114 VTI1AQ96AJ9 217 aa9.39□□□□□ -0.91
PRPF40A-205ENST00000467114 A0A0A0MRY4 1105 aa9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 MICAL2O94851 1124 aa9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 RFX1P22670 979 aa9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 PCSK7Q16549 785 aa9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 RSPO4Q2I0M5 234 aaPredicted RBP9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 NUDT8Q8WV74 236 aa9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.912e-7■■■■■ 33.6
PRPF40A-205ENST00000467114 ZFATQ9P243 1243 aa9.38□□□□□ -0.91
PRPF40A-205ENST00000467114 ELNP15502 786 aa9.37□□□□□ -0.91
PRPF40A-205ENST00000467114 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
PRPF40A-205ENST00000467114 NKAPLQ5M9Q1 402 aa9.37□□□□□ -0.91
PRPF40A-205ENST00000467114 TPSG1Q9NRR2 321 aa9.37□□□□□ -0.91
PRPF40A-205ENST00000467114 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
PRPF40A-205ENST00000467114 NOVA2Q9UNW9 492 aaKnown RBP9.37□□□□□ -0.91
PRPF40A-205ENST00000467114 C9orf172C9J069 976 aa9.36□□□□□ -0.91
PRPF40A-205ENST00000467114 RGS9O75916 674 aaPredicted RBP9.36□□□□□ -0.91
PRPF40A-205ENST00000467114 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
PRPF40A-205ENST00000467114 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
PRPF40A-205ENST00000467114 OPLAHO14841 1288 aa9.35□□□□□ -0.91
PRPF40A-205ENST00000467114 SELPP16109 830 aa9.35□□□□□ -0.91
PRPF40A-205ENST00000467114 FKBP5Q13451 457 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms