RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 OLFM4Q6UX06 510 aa22.51■■□□□ 1.19
CPSF4-209ENST00000465132 RTKN2Q8IZC4 609 aa22.51■■□□□ 1.19
CPSF4-209ENST00000465132 MAP3K15Q6ZN16 1313 aa22.51■■□□□ 1.19
CPSF4-209ENST00000465132 ZNF521Q96K83 1311 aa22.51■■□□□ 1.19
CPSF4-209ENST00000465132 ALDH1B1P30837 517 aa22.5■■□□□ 1.19
CPSF4-209ENST00000465132 COL13A1Q5TAT6 717 aaPredicted RBP22.5■■□□□ 1.19
CPSF4-209ENST00000465132 L3MBTL3Q96JM7 780 aaPredicted RBP22.5■■□□□ 1.19
CPSF4-209ENST00000465132 NYXQ9GZU5 481 aa22.5■■□□□ 1.19
CPSF4-209ENST00000465132 ZNF277Q9NRM2 450 aaPredicted RBP22.5■■□□□ 1.19
CPSF4-209ENST00000465132 IQCA1LA6NCM1 817 aa22.49■■□□□ 1.19
CPSF4-209ENST00000465132 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
CPSF4-209ENST00000465132 TTLL7Q6ZT98 887 aa22.49■■□□□ 1.19
CPSF4-209ENST00000465132 ABCC12Q96J65 1359 aa22.49■■□□□ 1.19
CPSF4-209ENST00000465132 CRY2Q49AN0 593 aa22.48■■□□□ 1.19
CPSF4-209ENST00000465132 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
CPSF4-209ENST00000465132 NUTM1Q86Y26 1132 aa22.48■■□□□ 1.19
CPSF4-209ENST00000465132 MYL6BP14649 208 aa22.47■■□□□ 1.19
CPSF4-209ENST00000465132 TAF1DQ9H5J8 278 aaPredicted RBP22.47■■□□□ 1.19
CPSF4-209ENST00000465132 ZNF541Q9H0D2 1346 aa22.47■■□□□ 1.19
CPSF4-209ENST00000465132 ZBTB3Q9H5J0 574 aa22.46■■□□□ 1.19
CPSF4-209ENST00000465132 CREBZFQ9NS37 354 aa22.46■■□□□ 1.19
CPSF4-209ENST00000465132 IARSP41252 1262 aaKnown RBP22.45■■□□□ 1.18
CPSF4-209ENST00000465132 LDHDQ86WU2 507 aa22.45■■□□□ 1.18
CPSF4-209ENST00000465132 SYNE4Q8N205 404 aa22.45■■□□□ 1.18
CPSF4-209ENST00000465132 MBIPQ9NS73 344 aa22.45■■□□□ 1.18
CPSF4-209ENST00000465132 UBN2Q6ZU65 1347 aa22.45■■□□□ 1.18
CPSF4-209ENST00000465132 IBTKQ9P2D0 1353 aaPredicted RBP22.45■■□□□ 1.18
CPSF4-209ENST00000465132 HOXB7P09629 217 aa22.44■■□□□ 1.18
CPSF4-209ENST00000465132 HSPA1AP0DMV8 641 aaKnown RBP22.44■■□□□ 1.18
CPSF4-209ENST00000465132 HSPA1BP0DMV9 641 aaKnown RBP22.44■■□□□ 1.18
CPSF4-209ENST00000465132 GPTP24298 496 aa22.44■■□□□ 1.18
CPSF4-209ENST00000465132 ERBB4Q15303 1308 aa22.44■■□□□ 1.18
CPSF4-209ENST00000465132 SNED1Q8TER0 1413 aa22.44■■□□□ 1.18
CPSF4-209ENST00000465132 RIC1Q4ADV7 1423 aa22.43■■□□□ 1.18
CPSF4-209ENST00000465132 FZD9O00144 591 aa22.43■■□□□ 1.18
CPSF4-209ENST00000465132 HOXA10P31260 410 aaPredicted RBP22.43■■□□□ 1.18
CPSF4-209ENST00000465132 SUSD4Q5VX71 490 aa22.43■■□□□ 1.18
CPSF4-209ENST00000465132 ZNF34Q8IZ26 560 aa22.43■■□□□ 1.18
CPSF4-209ENST00000465132 PSMD1Q99460 953 aa22.43■■□□□ 1.18
CPSF4-209ENST00000465132 SCN4AP35499 1836 aa22.43■■□□□ 1.18
CPSF4-209ENST00000465132 NUP98P52948 1817 aa22.43■■□□□ 1.18
CPSF4-209ENST00000465132 SLFN5Q08AF3 891 aa22.42■■□□□ 1.18
CPSF4-209ENST00000465132 CC2D2BQ6DHV5 1058 aa22.42■■□□□ 1.18
CPSF4-209ENST00000465132 RPGRQ92834 1020 aaKnown RBP22.42■■□□□ 1.18
CPSF4-209ENST00000465132 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
CPSF4-209ENST00000465132 HACL1Q9UJ83 578 aa22.42■■□□□ 1.18
CPSF4-209ENST00000465132 PASKQ96RG2 1323 aa22.41■■□□□ 1.18
CPSF4-209ENST00000465132 GIGYF2Q6Y7W6 1299 aaKnown RBP22.41■■□□□ 1.18
CPSF4-209ENST00000465132 FANCIQ9NVI1 1328 aa22.4■■□□□ 1.18
CPSF4-209ENST00000465132 NTSR2O95665 410 aa22.4■■□□□ 1.18
CPSF4-209ENST00000465132 EAPPQ56P03 285 aaPredicted RBP22.4■■□□□ 1.18
CPSF4-209ENST00000465132 MKRN1Q9UHC7 482 aaKnown RBP22.4■■□□□ 1.18
CPSF4-209ENST00000465132 EPHX2P34913 555 aa22.39■■□□□ 1.17
CPSF4-209ENST00000465132 PDIA6Q15084 440 aa22.39■■□□□ 1.17
CPSF4-209ENST00000465132 LRP10Q7Z4F1 713 aa22.39■■□□□ 1.17
CPSF4-209ENST00000465132 JDP2Q8WYK2 163 aa22.39■■□□□ 1.17
CPSF4-209ENST00000465132 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
CPSF4-209ENST00000465132 ITGBL1O95965 494 aaPredicted RBP22.38■■□□□ 1.17
CPSF4-209ENST00000465132 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
CPSF4-209ENST00000465132 GRIPAP1Q4V328 841 aa22.38■■□□□ 1.17
CPSF4-209ENST00000465132 TNS4Q8IZW8 715 aa22.38■■□□□ 1.17
CPSF4-209ENST00000465132 GPC2Q8N158 579 aa22.38■■□□□ 1.17
CPSF4-209ENST00000465132 TSR2Q969E8 191 aaKnown RBP22.38■■□□□ 1.17
CPSF4-209ENST00000465132 RBM17Q96I25 401 aaKnown RBP22.38■■□□□ 1.17
CPSF4-209ENST00000465132 CRAMP1Q96RY5 1269 aa22.38■■□□□ 1.17
CPSF4-209ENST00000465132 PCNTO95613 3336 aa22.37■■□□□ 1.17
CPSF4-209ENST00000465132 EIF2S2P20042 333 aaKnown RBP22.37■■□□□ 1.17
CPSF4-209ENST00000465132 PARP10Q53GL7 1025 aa22.37■■□□□ 1.17
CPSF4-209ENST00000465132 C3orf67Q6ZVT6 689 aa22.37■■□□□ 1.17
CPSF4-209ENST00000465132 PPP1R42Q7Z4L9 355 aa22.37■■□□□ 1.17
CPSF4-209ENST00000465132 ZNF428Q96B54 188 aa22.37■■□□□ 1.17
CPSF4-209ENST00000465132 PNMA8AQ86V59 439 aaPredicted RBP22.36■■□□□ 1.17
CPSF4-209ENST00000465132 CLEC11AQ9Y240 323 aa22.36■■□□□ 1.17
CPSF4-209ENST00000465132 CNTNAP1P78357 1384 aa22.36■■□□□ 1.17
CPSF4-209ENST00000465132 PPEF1O14829 653 aaPredicted RBP22.35■■□□□ 1.17
CPSF4-209ENST00000465132 PROSER3Q2NL68 480 aa22.35■■□□□ 1.17
CPSF4-209ENST00000465132 SLC51AQ86UW1 340 aa22.35■■□□□ 1.17
CPSF4-209ENST00000465132 TRMT2AQ8IZ69 625 aaKnown RBP22.35■■□□□ 1.17
CPSF4-209ENST00000465132 COL4A5P29400 1685 aa22.35■■□□□ 1.17
CPSF4-209ENST00000465132 ADAMTSL1Q8N6G6 1762 aa22.35■■□□□ 1.17
CPSF4-209ENST00000465132 TMEM88BA6NKF7 163 aa22.34■■□□□ 1.17
CPSF4-209ENST00000465132 ANXA1P04083 346 aa22.34■■□□□ 1.17
CPSF4-209ENST00000465132 EIF6P56537 245 aaKnown RBP22.34■■□□□ 1.17
CPSF4-209ENST00000465132 TWISTNBQ3B726 338 aaPredicted RBP22.34■■□□□ 1.17
CPSF4-209ENST00000465132 SLC10A5Q5PT55 438 aa22.34■■□□□ 1.17
CPSF4-209ENST00000465132 DUSP27Q5VZP5 1158 aa22.34■■□□□ 1.17
CPSF4-209ENST00000465132 NLRP3Q96P20 1036 aa22.34■■□□□ 1.17
CPSF4-209ENST00000465132 UTP14AQ9BVJ6 771 aaKnown RBP22.34■■□□□ 1.17
CPSF4-209ENST00000465132 TCERG1O14776 1098 aaKnown RBP22.33■■□□□ 1.17
CPSF4-209ENST00000465132 LARGE2Q8N3Y3 721 aa22.33■■□□□ 1.17
CPSF4-209ENST00000465132 CDCA7LQ96GN5 454 aa22.33■■□□□ 1.17
CPSF4-209ENST00000465132 EXOSC9Q06265 439 aaKnown RBP22.32■■□□□ 1.16
CPSF4-209ENST00000465132 CCDC30Q5VVM6 783 aa22.32■■□□□ 1.16
CPSF4-209ENST00000465132 MAP1SQ66K74 1059 aaPredicted RBP22.32■■□□□ 1.16
CPSF4-209ENST00000465132 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
CPSF4-209ENST00000465132 GJA3Q9Y6H8 435 aa22.32■■□□□ 1.16
CPSF4-209ENST00000465132 HDGFL1Q5TGJ6 251 aa22.31■■□□□ 1.16
CPSF4-209ENST00000465132 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
CPSF4-209ENST00000465132 STK31Q9BXU1 1019 aa22.31■■□□□ 1.16
CPSF4-209ENST00000465132 CACNA1FO60840 1977 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms