RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 LARGE2Q8N3Y3 721 aa16.15■□□□□ 0.18
RPA3-206ENST00000463632 L3MBTL3Q96JM7 780 aaPredicted RBP16.15■□□□□ 0.18
RPA3-206ENST00000463632 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
RPA3-206ENST00000463632 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
RPA3-206ENST00000463632 PPEF1O14829 653 aaPredicted RBP16.14■□□□□ 0.17
RPA3-206ENST00000463632 LMOD1P29536 600 aaPredicted RBP16.14■□□□□ 0.17
RPA3-206ENST00000463632 WDR43Q15061 677 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPA3-206ENST00000463632 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
RPA3-206ENST00000463632 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
RPA3-206ENST00000463632 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
RPA3-206ENST00000463632 SLX4Q8IY92 1834 aa16.14■□□□□ 0.17
RPA3-206ENST00000463632 ERBB4Q15303 1308 aa16.14■□□□□ 0.17
RPA3-206ENST00000463632 UBN2Q6ZU65 1347 aa16.14■□□□□ 0.17
RPA3-206ENST00000463632 TMPOP42166 694 aaKnown RBP16.13■□□□□ 0.17
RPA3-206ENST00000463632 CRY2Q49AN0 593 aa16.13■□□□□ 0.17
RPA3-206ENST00000463632 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
RPA3-206ENST00000463632 ZNF34Q8IZ26 560 aa16.13■□□□□ 0.17
RPA3-206ENST00000463632 PSMD1Q99460 953 aa16.13■□□□□ 0.17
RPA3-206ENST00000463632 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
RPA3-206ENST00000463632 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
RPA3-206ENST00000463632 GPC2Q8N158 579 aa16.12■□□□□ 0.17
RPA3-206ENST00000463632 ZNF428Q96B54 188 aa16.12■□□□□ 0.17
RPA3-206ENST00000463632 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
RPA3-206ENST00000463632 BCORQ6W2J9 1755 aa16.11■□□□□ 0.17
RPA3-206ENST00000463632 TMEM88BA6NKF7 163 aa16.11■□□□□ 0.17
RPA3-206ENST00000463632 FZD9O00144 591 aa16.11■□□□□ 0.17
RPA3-206ENST00000463632 NTSR2O95665 410 aa16.11■□□□□ 0.17
RPA3-206ENST00000463632 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
RPA3-206ENST00000463632 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
RPA3-206ENST00000463632 COPS6Q7L5N1 327 aa16.11■□□□□ 0.17
RPA3-206ENST00000463632 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
RPA3-206ENST00000463632 PPIP5K2O43314 1243 aa16.1■□□□□ 0.17
RPA3-206ENST00000463632 HOXA10P31260 410 aaPredicted RBP16.1■□□□□ 0.17
RPA3-206ENST00000463632 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
RPA3-206ENST00000463632 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
RPA3-206ENST00000463632 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
RPA3-206ENST00000463632 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
RPA3-206ENST00000463632 AIDAQ96BJ3 306 aa16.1■□□□□ 0.17
RPA3-206ENST00000463632 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
RPA3-206ENST00000463632 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
RPA3-206ENST00000463632 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
RPA3-206ENST00000463632 ABT1Q9ULW3 272 aaKnown RBP16.09■□□□□ 0.17
RPA3-206ENST00000463632 PDIA6Q15084 440 aa16.08■□□□□ 0.16
RPA3-206ENST00000463632 AOC3Q16853 763 aa16.08■□□□□ 0.16
RPA3-206ENST00000463632 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
RPA3-206ENST00000463632 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
RPA3-206ENST00000463632 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
RPA3-206ENST00000463632 IBTKQ9P2D0 1353 aaPredicted RBP16.08■□□□□ 0.16
RPA3-206ENST00000463632 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.16
RPA3-206ENST00000463632 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
RPA3-206ENST00000463632 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
RPA3-206ENST00000463632 DDX46Q7L014 1031 aaKnown RBP16.07■□□□□ 0.16
RPA3-206ENST00000463632 SUPT20HQ8NEM7 779 aa16.07■□□□□ 0.16
RPA3-206ENST00000463632 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
RPA3-206ENST00000463632 PASKQ96RG2 1323 aa16.07■□□□□ 0.16
RPA3-206ENST00000463632 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
RPA3-206ENST00000463632 CNTNAP1P78357 1384 aa16.06■□□□□ 0.16
RPA3-206ENST00000463632 ITGBL1O95965 494 aaPredicted RBP16.06■□□□□ 0.16
RPA3-206ENST00000463632 EPS15P42566 896 aa16.06■□□□□ 0.16
RPA3-206ENST00000463632 VEGFBP49765 207 aa16.06■□□□□ 0.16
RPA3-206ENST00000463632 GRM1Q13255 1194 aa16.06■□□□□ 0.16
RPA3-206ENST00000463632 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
RPA3-206ENST00000463632 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
RPA3-206ENST00000463632 ABCC4O15439 1325 aa16.05■□□□□ 0.16
RPA3-206ENST00000463632 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
RPA3-206ENST00000463632 DEFB115Q30KQ5 88 aa16.05■□□□□ 0.16
RPA3-206ENST00000463632 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
RPA3-206ENST00000463632 MPNDQ8N594 471 aa16.05■□□□□ 0.16
RPA3-206ENST00000463632 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
RPA3-206ENST00000463632 CHPF2Q9P2E5 772 aa16.05■□□□□ 0.16
RPA3-206ENST00000463632 CACNA1SQ13698 1873 aa16.04■□□□□ 0.16
RPA3-206ENST00000463632 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
RPA3-206ENST00000463632 BBOX1O75936 387 aa16.04■□□□□ 0.16
RPA3-206ENST00000463632 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
RPA3-206ENST00000463632 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
RPA3-206ENST00000463632 CHL1O00533 1208 aa16.03■□□□□ 0.16
RPA3-206ENST00000463632 FOXN1O15353 648 aa16.03■□□□□ 0.16
RPA3-206ENST00000463632 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
RPA3-206ENST00000463632 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
RPA3-206ENST00000463632 ADAMTS8Q9UP79 889 aa16.03■□□□□ 0.16
RPA3-206ENST00000463632 RIC1Q4ADV7 1423 aa16.02■□□□□ 0.16
RPA3-206ENST00000463632 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
RPA3-206ENST00000463632 SCNN1DP51172 638 aa16.02■□□□□ 0.16
RPA3-206ENST00000463632 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.16
RPA3-206ENST00000463632 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
RPA3-206ENST00000463632 RAD17O75943 681 aa16.01■□□□□ 0.15
RPA3-206ENST00000463632 CTCFP49711 727 aaPredicted RBP16.01■□□□□ 0.15
RPA3-206ENST00000463632 GRAPQ13588 217 aa16.01■□□□□ 0.15
RPA3-206ENST00000463632 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
RPA3-206ENST00000463632 ANKRD13DQ6ZTN6 518 aa16.01■□□□□ 0.15
RPA3-206ENST00000463632 USP50Q70EL3 339 aaPredicted RBP16.01■□□□□ 0.15
RPA3-206ENST00000463632 SP8Q8IXZ3 490 aa16.01■□□□□ 0.15
RPA3-206ENST00000463632 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
RPA3-206ENST00000463632 GRAPLQ8TC17 118 aaPredicted RBP16.01■□□□□ 0.15
RPA3-206ENST00000463632 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
RPA3-206ENST00000463632 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
RPA3-206ENST00000463632 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
RPA3-206ENST00000463632 TRAF5O00463 557 aa16■□□□□ 0.15
RPA3-206ENST00000463632 GMPSP49915 693 aaPredicted RBP16■□□□□ 0.15
RPA3-206ENST00000463632 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms