RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 ZNF34Q8IZ26 560 aa20.17■□□□□ 0.82
CMSS1-202ENST00000463526 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
CMSS1-202ENST00000463526 PSMD1Q99460 953 aa20.17■□□□□ 0.82
CMSS1-202ENST00000463526 DLG5Q8TDM6 1919 aa20.16■□□□□ 0.82
CMSS1-202ENST00000463526 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
CMSS1-202ENST00000463526 ANXA1P04083 346 aa20.16■□□□□ 0.82
CMSS1-202ENST00000463526 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
CMSS1-202ENST00000463526 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
CMSS1-202ENST00000463526 C3orf67Q6ZVT6 689 aa20.16■□□□□ 0.82
CMSS1-202ENST00000463526 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
CMSS1-202ENST00000463526 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
CMSS1-202ENST00000463526 TMEM88BA6NKF7 163 aa20.15■□□□□ 0.82
CMSS1-202ENST00000463526 NTSR2O95665 410 aa20.15■□□□□ 0.82
CMSS1-202ENST00000463526 HOXA10P31260 410 aaPredicted RBP20.15■□□□□ 0.82
CMSS1-202ENST00000463526 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
CMSS1-202ENST00000463526 GIGYF2Q6Y7W6 1299 aaKnown RBP20.15■□□□□ 0.82
CMSS1-202ENST00000463526 GPC2Q8N158 579 aa20.15■□□□□ 0.82
CMSS1-202ENST00000463526 LARGE2Q8N3Y3 721 aa20.15■□□□□ 0.82
CMSS1-202ENST00000463526 KDM3BQ7LBC6 1761 aa20.15■□□□□ 0.82
CMSS1-202ENST00000463526 CNTNAP1P78357 1384 aa20.14■□□□□ 0.81
CMSS1-202ENST00000463526 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
CMSS1-202ENST00000463526 PROSER3Q2NL68 480 aa20.14■□□□□ 0.81
CMSS1-202ENST00000463526 PPP1R42Q7Z4L9 355 aa20.14■□□□□ 0.81
CMSS1-202ENST00000463526 PNMA8AQ86V59 439 aaPredicted RBP20.14■□□□□ 0.81
CMSS1-202ENST00000463526 CNTROBQ8N137 903 aa20.14■□□□□ 0.81
CMSS1-202ENST00000463526 CRAMP1Q96RY5 1269 aa20.13■□□□□ 0.81
CMSS1-202ENST00000463526 SCN4AP35499 1836 aa20.13■□□□□ 0.81
CMSS1-202ENST00000463526 NUP98P52948 1817 aa20.13■□□□□ 0.81
CMSS1-202ENST00000463526 ERBB4Q15303 1308 aa20.12■□□□□ 0.81
CMSS1-202ENST00000463526 VEGFBP49765 207 aa20.12■□□□□ 0.81
CMSS1-202ENST00000463526 AIMP1Q12904 312 aaKnown RBP20.12■□□□□ 0.81
CMSS1-202ENST00000463526 PDIA6Q15084 440 aa20.12■□□□□ 0.81
CMSS1-202ENST00000463526 NEUROD2Q15784 382 aa20.12■□□□□ 0.81
CMSS1-202ENST00000463526 NLRP3Q96P20 1036 aa20.12■□□□□ 0.81
CMSS1-202ENST00000463526 UTP14AQ9BVJ6 771 aaKnown RBP20.12■□□□□ 0.81
CMSS1-202ENST00000463526 SNED1Q8TER0 1413 aa20.11■□□□□ 0.81
CMSS1-202ENST00000463526 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
CMSS1-202ENST00000463526 FOXN1O15353 648 aa20.11■□□□□ 0.81
CMSS1-202ENST00000463526 LMOD1P29536 600 aaPredicted RBP20.11■□□□□ 0.81
CMSS1-202ENST00000463526 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
CMSS1-202ENST00000463526 TMPOP42166 694 aaKnown RBP20.1■□□□□ 0.81
CMSS1-202ENST00000463526 EPS15P42566 896 aa20.1■□□□□ 0.81
CMSS1-202ENST00000463526 LRP10Q7Z4F1 713 aa20.1■□□□□ 0.81
CMSS1-202ENST00000463526 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
CMSS1-202ENST00000463526 ZNF428Q96B54 188 aa20.1■□□□□ 0.81
CMSS1-202ENST00000463526 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
CMSS1-202ENST00000463526 COL4A5P29400 1685 aa20.1■□□□□ 0.81
CMSS1-202ENST00000463526 PPIP5K2O43314 1243 aa20.09■□□□□ 0.81
CMSS1-202ENST00000463526 GRIPAP1Q4V328 841 aa20.09■□□□□ 0.81
CMSS1-202ENST00000463526 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
CMSS1-202ENST00000463526 NIM1KQ8IY84 436 aa20.09■□□□□ 0.81
CMSS1-202ENST00000463526 RALBP1Q15311 655 aa20.08■□□□□ 0.81
CMSS1-202ENST00000463526 AOC3Q16853 763 aa20.08■□□□□ 0.81
CMSS1-202ENST00000463526 XAGE3Q8WTP9 111 aa20.08■□□□□ 0.81
CMSS1-202ENST00000463526 AIDAQ96BJ3 306 aa20.08■□□□□ 0.81
CMSS1-202ENST00000463526 ABT1Q9ULW3 272 aaKnown RBP20.08■□□□□ 0.81
CMSS1-202ENST00000463526 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
CMSS1-202ENST00000463526 RIC1Q4ADV7 1423 aa20.08■□□□□ 0.8
CMSS1-202ENST00000463526 HCLS1P14317 486 aaPredicted RBP20.07■□□□□ 0.8
CMSS1-202ENST00000463526 SCNN1DP51172 638 aa20.07■□□□□ 0.8
CMSS1-202ENST00000463526 FMR1Q06787 632 aaKnown RBP eCLIP20.07■□□□□ 0.8
CMSS1-202ENST00000463526 LMOD3Q0VAK6 560 aa20.07■□□□□ 0.8
CMSS1-202ENST00000463526 KRT24Q2M2I5 525 aa20.07■□□□□ 0.8
CMSS1-202ENST00000463526 DEFB115Q30KQ5 88 aa20.07■□□□□ 0.8
CMSS1-202ENST00000463526 SLC10A5Q5PT55 438 aa20.07■□□□□ 0.8
CMSS1-202ENST00000463526 ATP6V0A2Q9Y487 856 aa20.07■□□□□ 0.8
CMSS1-202ENST00000463526 ABCC4O15439 1325 aa20.06■□□□□ 0.8
CMSS1-202ENST00000463526 DDX21Q9NR30 783 aaKnown RBP eCLIP20.05■□□□□ 0.8
CMSS1-202ENST00000463526 BABAM1Q9NWV8 329 aa20.05■□□□□ 0.8
CMSS1-202ENST00000463526 TRMT112Q9UI30 125 aaKnown RBP20.05■□□□□ 0.8
CMSS1-202ENST00000463526 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
CMSS1-202ENST00000463526 HSP90AB3PQ58FF7 597 aa20.04■□□□□ 0.8
CMSS1-202ENST00000463526 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
CMSS1-202ENST00000463526 NLRP10Q86W26 655 aa20.04■□□□□ 0.8
CMSS1-202ENST00000463526 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
CMSS1-202ENST00000463526 CTCFP49711 727 aaPredicted RBP20.03■□□□□ 0.8
CMSS1-202ENST00000463526 TCIRG1Q13488 830 aa20.03■□□□□ 0.8
CMSS1-202ENST00000463526 DPP8Q6V1X1 898 aaPredicted RBP20.03■□□□□ 0.8
CMSS1-202ENST00000463526 ADAMTSL1Q8N6G6 1762 aa20.03■□□□□ 0.8
CMSS1-202ENST00000463526 TRAF5O00463 557 aa20.02■□□□□ 0.8
CMSS1-202ENST00000463526 BBOX1O75936 387 aa20.02■□□□□ 0.8
CMSS1-202ENST00000463526 CXCL9Q07325 125 aa20.02■□□□□ 0.8
CMSS1-202ENST00000463526 GRM1Q13255 1194 aa20.02■□□□□ 0.8
CMSS1-202ENST00000463526 DDX46Q7L014 1031 aaKnown RBP20.02■□□□□ 0.8
CMSS1-202ENST00000463526 MPNDQ8N594 471 aa20.02■□□□□ 0.8
CMSS1-202ENST00000463526 SUPT20HQ8NEM7 779 aa20.02■□□□□ 0.8
CMSS1-202ENST00000463526 WBP1LQ9NX94 342 aa20.02■□□□□ 0.8
CMSS1-202ENST00000463526 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.79
CMSS1-202ENST00000463526 LBX1P52954 281 aa20.01■□□□□ 0.79
CMSS1-202ENST00000463526 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
CMSS1-202ENST00000463526 SP8Q8IXZ3 490 aa20.01■□□□□ 0.79
CMSS1-202ENST00000463526 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
CMSS1-202ENST00000463526 CHPF2Q9P2E5 772 aa20.01■□□□□ 0.79
CMSS1-202ENST00000463526 ZNRF3Q9ULT6 936 aa20.01■□□□□ 0.79
CMSS1-202ENST00000463526 LTBP1Q14766 1721 aa20.01■□□□□ 0.79
CMSS1-202ENST00000463526 CHL1O00533 1208 aa20■□□□□ 0.79
CMSS1-202ENST00000463526 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
CMSS1-202ENST00000463526 SH3TC1Q8TE82 1336 aa20■□□□□ 0.79
CMSS1-202ENST00000463526 RAD17O75943 681 aa19.99■□□□□ 0.79
CMSS1-202ENST00000463526 GMPSP49915 693 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms