RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 RNF123Q5XPI4 1314 aa30.59■■■□□ 2.49
SSNA1-203ENST00000463511 RPGRQ92834 1020 aaKnown RBP30.59■■■□□ 2.49
SSNA1-203ENST00000463511 FZD9O00144 591 aa30.58■■■□□ 2.49
SSNA1-203ENST00000463511 PSMD1Q99460 953 aa30.58■■■□□ 2.49
SSNA1-203ENST00000463511 CNTNAP1P78357 1384 aa30.57■■■□□ 2.48
SSNA1-203ENST00000463511 LAMB2P55268 1798 aa30.57■■■□□ 2.48
SSNA1-203ENST00000463511 EPHX2P34913 555 aa30.57■■■□□ 2.48
SSNA1-203ENST00000463511 LTBP1Q14766 1721 aa30.56■■■□□ 2.48
SSNA1-203ENST00000463511 SUSD4Q5VX71 490 aa30.56■■■□□ 2.48
SSNA1-203ENST00000463511 CLEC11AQ9Y240 323 aa30.56■■■□□ 2.48
SSNA1-203ENST00000463511 ITGBL1O95965 494 aaPredicted RBP30.55■■■□□ 2.48
SSNA1-203ENST00000463511 PNNQ9H307 717 aaKnown RBP30.55■■■□□ 2.48
SSNA1-203ENST00000463511 HOXA10P31260 410 aaPredicted RBP30.54■■■□□ 2.48
SSNA1-203ENST00000463511 ZNF34Q8IZ26 560 aa30.54■■■□□ 2.48
SSNA1-203ENST00000463511 GPC2Q8N158 579 aa30.54■■■□□ 2.48
SSNA1-203ENST00000463511 JDP2Q8WYK2 163 aa30.54■■■□□ 2.48
SSNA1-203ENST00000463511 ERBB4Q15303 1308 aa30.53■■■□□ 2.48
SSNA1-203ENST00000463511 NTSR2O95665 410 aa30.53■■■□□ 2.48
SSNA1-203ENST00000463511 CC2D2BQ6DHV5 1058 aa30.53■■■□□ 2.48
SSNA1-203ENST00000463511 SLC51AQ86UW1 340 aa30.53■■■□□ 2.48
SSNA1-203ENST00000463511 TSPYL4Q9UJ04 414 aa30.53■■■□□ 2.48
SSNA1-203ENST00000463511 GIGYF2Q6Y7W6 1299 aaKnown RBP30.52■■■□□ 2.48
SSNA1-203ENST00000463511 TMEM88BA6NKF7 163 aa30.51■■■□□ 2.47
SSNA1-203ENST00000463511 C3orf67Q6ZVT6 689 aa30.51■■■□□ 2.47
SSNA1-203ENST00000463511 PNMA8AQ86V59 439 aaPredicted RBP30.51■■■□□ 2.47
SSNA1-203ENST00000463511 TCERG1O14776 1098 aaKnown RBP30.5■■■□□ 2.47
SSNA1-203ENST00000463511 PPEF1O14829 653 aaPredicted RBP30.5■■■□□ 2.47
SSNA1-203ENST00000463511 MAP1SQ66K74 1059 aaPredicted RBP30.5■■■□□ 2.47
SSNA1-203ENST00000463511 RBM17Q96I25 401 aaKnown RBP30.5■■■□□ 2.47
SSNA1-203ENST00000463511 GJA3Q9Y6H8 435 aa30.5■■■□□ 2.47
SSNA1-203ENST00000463511 EIF6P56537 245 aaKnown RBP30.49■■■□□ 2.47
SSNA1-203ENST00000463511 CRAMP1Q96RY5 1269 aa30.49■■■□□ 2.47
SSNA1-203ENST00000463511 EIF2S2P20042 333 aaKnown RBP30.48■■■□□ 2.47
SSNA1-203ENST00000463511 LRP10Q7Z4F1 713 aa30.48■■■□□ 2.47
SSNA1-203ENST00000463511 PPP1R42Q7Z4L9 355 aa30.48■■■□□ 2.47
SSNA1-203ENST00000463511 RIPK4P57078 832 aa30.47■■■□□ 2.47
SSNA1-203ENST00000463511 PROSER3Q2NL68 480 aa30.47■■■□□ 2.47
SSNA1-203ENST00000463511 CNTROBQ8N137 903 aa30.47■■■□□ 2.47
SSNA1-203ENST00000463511 LARGE2Q8N3Y3 721 aa30.47■■■□□ 2.47
SSNA1-203ENST00000463511 TRPM7Q96QT4 1865 aa30.46■■■□□ 2.47
SSNA1-203ENST00000463511 ANXA1P04083 346 aa30.46■■■□□ 2.47
SSNA1-203ENST00000463511 VEGFBP49765 207 aa30.46■■■□□ 2.47
SSNA1-203ENST00000463511 PDIA6Q15084 440 aa30.46■■■□□ 2.47
SSNA1-203ENST00000463511 GRIPAP1Q4V328 841 aa30.46■■■□□ 2.47
SSNA1-203ENST00000463511 PARP10Q53GL7 1025 aa30.46■■■□□ 2.47
SSNA1-203ENST00000463511 TAF1P21675 1872 aa30.46■■■□□ 2.47
SSNA1-203ENST00000463511 FOXN1O15353 648 aa30.45■■■□□ 2.47
SSNA1-203ENST00000463511 LMOD1P29536 600 aaPredicted RBP30.44■■■□□ 2.46
SSNA1-203ENST00000463511 NLRP3Q96P20 1036 aa30.43■■■□□ 2.46
SSNA1-203ENST00000463511 SCNN1DP51172 638 aa30.42■■■□□ 2.46
SSNA1-203ENST00000463511 UTP14AQ9BVJ6 771 aaKnown RBP30.42■■■□□ 2.46
SSNA1-203ENST00000463511 NIM1KQ8IY84 436 aa30.41■■■□□ 2.46
SSNA1-203ENST00000463511 NECTIN2Q92692 538 aa30.41■■■□□ 2.46
SSNA1-203ENST00000463511 PPIP5K2O43314 1243 aa30.4■■■□□ 2.46
SSNA1-203ENST00000463511 TMPOP42166 694 aaKnown RBP30.4■■■□□ 2.46
SSNA1-203ENST00000463511 ABCC4O15439 1325 aa30.4■■■□□ 2.46
SSNA1-203ENST00000463511 RASSF10A6NK89 507 aa30.39■■■□□ 2.46
SSNA1-203ENST00000463511 EPS15P42566 896 aa30.39■■■□□ 2.46
SSNA1-203ENST00000463511 LMOD3Q0VAK6 560 aa30.39■■■□□ 2.46
SSNA1-203ENST00000463511 AIDAQ96BJ3 306 aa30.39■■■□□ 2.46
SSNA1-203ENST00000463511 BABAM1Q9NWV8 329 aa30.39■■■□□ 2.46
SSNA1-203ENST00000463511 ATP6V0A2Q9Y487 856 aa30.39■■■□□ 2.46
SSNA1-203ENST00000463511 DDX60Q8IY21 1712 aaKnown RBP30.39■■■□□ 2.45
SSNA1-203ENST00000463511 AOC3Q16853 763 aa30.38■■■□□ 2.45
SSNA1-203ENST00000463511 SLC10A5Q5PT55 438 aa30.38■■■□□ 2.45
SSNA1-203ENST00000463511 TMX4Q9H1E5 349 aaPredicted RBP30.38■■■□□ 2.45
SSNA1-203ENST00000463511 AIMP1Q12904 312 aaKnown RBP30.37■■■□□ 2.45
SSNA1-203ENST00000463511 RALBP1Q15311 655 aa30.37■■■□□ 2.45
SSNA1-203ENST00000463511 COPS6Q7L5N1 327 aa30.37■■■□□ 2.45
SSNA1-203ENST00000463511 DEFB115Q30KQ5 88 aa30.36■■■□□ 2.45
SSNA1-203ENST00000463511 XAGE3Q8WTP9 111 aa30.36■■■□□ 2.45
SSNA1-203ENST00000463511 DDX21Q9NR30 783 aaKnown RBP eCLIP30.36■■■□□ 2.45
SSNA1-203ENST00000463511 ABT1Q9ULW3 272 aaKnown RBP30.36■■■□□ 2.45
SSNA1-203ENST00000463511 THSD7BQ9C0I4 1608 aa30.36■■■□□ 2.45
SSNA1-203ENST00000463511 NLRP10Q86W26 655 aa30.35■■■□□ 2.45
SSNA1-203ENST00000463511 LRRC37AA6NMS7 1700 aa30.34■■■□□ 2.45
SSNA1-203ENST00000463511 HCLS1P14317 486 aaPredicted RBP30.34■■■□□ 2.45
SSNA1-203ENST00000463511 CTCFP49711 727 aaPredicted RBP30.34■■■□□ 2.45
SSNA1-203ENST00000463511 FMR1Q06787 632 aaKnown RBP eCLIP30.34■■■□□ 2.45
SSNA1-203ENST00000463511 NEUROD2Q15784 382 aa30.34■■■□□ 2.45
SSNA1-203ENST00000463511 HSP90AB3PQ58FF7 597 aa30.34■■■□□ 2.45
SSNA1-203ENST00000463511 CCDC146Q8IYE0 955 aa30.34■■■□□ 2.45
SSNA1-203ENST00000463511 PRDM10Q9NQV6 1147 aa30.34■■■□□ 2.45
SSNA1-203ENST00000463511 WBP1LQ9NX94 342 aa30.34■■■□□ 2.45
SSNA1-203ENST00000463511 KRT24Q2M2I5 525 aa30.33■■■□□ 2.45
SSNA1-203ENST00000463511 USP50Q70EL3 339 aaPredicted RBP30.33■■■□□ 2.45
SSNA1-203ENST00000463511 WDR33Q9C0J8 1336 aaKnown RBP30.31■■■□□ 2.44
SSNA1-203ENST00000463511 VPS33BQ9H267 617 aa30.31■■■□□ 2.44
SSNA1-203ENST00000463511 TRMT112Q9UI30 125 aaKnown RBP30.31■■■□□ 2.44
SSNA1-203ENST00000463511 TCIRG1Q13488 830 aa30.3■■■□□ 2.44
SSNA1-203ENST00000463511 DPP8Q6V1X1 898 aaPredicted RBP30.3■■■□□ 2.44
SSNA1-203ENST00000463511 SUPT20HQ8NEM7 779 aa30.3■■■□□ 2.44
SSNA1-203ENST00000463511 ZNF428Q96B54 188 aa30.3■■■□□ 2.44
SSNA1-203ENST00000463511 RTFDC1Q9BY42 306 aaPredicted RBP30.3■■■□□ 2.44
SSNA1-203ENST00000463511 PRKRIP1Q9H875 184 aaPredicted RBP30.3■■■□□ 2.44
SSNA1-203ENST00000463511 GPRC5DQ9NZD1 345 aa30.3■■■□□ 2.44
SSNA1-203ENST00000463511 DUOX1Q9NRD9 1551 aa30.29■■■□□ 2.44
SSNA1-203ENST00000463511 BBOX1O75936 387 aa30.29■■■□□ 2.44
SSNA1-203ENST00000463511 CXCL9Q07325 125 aa30.29■■■□□ 2.44
SSNA1-203ENST00000463511 SP8Q8IXZ3 490 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms