RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 UNC5CLQ8IV45 518 aa8.44□□□□□ -1.06
SPTA1-202ENST00000461624 SEPT12Q8IYM1 358 aa8.44□□□□□ -1.06
SPTA1-202ENST00000461624 ORAI2Q96SN7 254 aa8.44□□□□□ -1.06
SPTA1-202ENST00000461624 RRP7BPQ9NSQ0 103 aa8.44□□□□□ -1.06
SPTA1-202ENST00000461624 PRAG1Q86YV5 1406 aa8.44□□□□□ -1.06
SPTA1-202ENST00000461624 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 NWD2Q9ULI1 1742 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 BAG6P46379 1132 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 TMEM132AQ24JP5 1023 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 EPS8L1Q8TE68 723 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 PCMTD1Q96MG8 357 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-202ENST00000461624 ADGRL2O95490 1459 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 E9PCH4 1651 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 RREB1Q92766 1687 aa8.43□□□□□ -1.06
SPTA1-202ENST00000461624 PTSQ03393 145 aa8.42□□□□□ -1.06
SPTA1-202ENST00000461624 TMEM259Q4ZIN3 620 aa8.42□□□□□ -1.06
SPTA1-202ENST00000461624 ZNF784Q8NCA9 323 aaPredicted RBP8.42□□□□□ -1.06
SPTA1-202ENST00000461624 DAPK1P53355 1430 aa8.42□□□□□ -1.06
SPTA1-202ENST00000461624 NUP188Q5SRE5 1749 aa8.41□□□□□ -1.06
SPTA1-202ENST00000461624 NINLQ9Y2I6 1382 aa8.41□□□□□ -1.06
SPTA1-202ENST00000461624 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
SPTA1-202ENST00000461624 KRT27Q7Z3Y8 459 aa8.41□□□□□ -1.06
SPTA1-202ENST00000461624 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
SPTA1-202ENST00000461624 NRAPQ86VF7 1730 aa8.4□□□□□ -1.06
SPTA1-202ENST00000461624 ABCA3Q99758 1704 aa8.4□□□□□ -1.06
SPTA1-202ENST00000461624 ESPNB1AK53 854 aa8.4□□□□□ -1.06
SPTA1-202ENST00000461624 VPS72Q15906 364 aa8.4□□□□□ -1.06
SPTA1-202ENST00000461624 CDC42BPGQ6DT37 1551 aa8.39□□□□□ -1.07
SPTA1-202ENST00000461624 FIGNL2A6NMB9 653 aa8.39□□□□□ -1.07
SPTA1-202ENST00000461624 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
SPTA1-202ENST00000461624 TRIM34Q9BYJ4 488 aa8.39□□□□□ -1.07
SPTA1-202ENST00000461624 THSD7AQ9UPZ6 1657 aa8.39□□□□□ -1.07
SPTA1-202ENST00000461624 CHD4Q14839 1912 aa8.39□□□□□ -1.07
SPTA1-202ENST00000461624 ROBO2Q9HCK4 1378 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 NPHP3Q7Z494 1330 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 ADH1AP07327 375 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 C1QTNF8P60827 252 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 RELBQ01201 579 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 CCDC155Q8N6L0 562 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 AGBL1Q96MI9 1066 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 CAMKK2Q96RR4 588 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 ADGRB2O60241 1585 aa8.38□□□□□ -1.07
SPTA1-202ENST00000461624 ANKRD30AQ9BXX3 1397 aa8.37□□□□□ -1.07
SPTA1-202ENST00000461624 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
SPTA1-202ENST00000461624 ERVH48-1M5A8F1 160 aa8.37□□□□□ -1.07
SPTA1-202ENST00000461624 CTSOP43234 321 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-202ENST00000461624 INSM2Q96T92 566 aaPredicted RBP8.37□□□□□ -1.07
SPTA1-202ENST00000461624 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
SPTA1-202ENST00000461624 PARD3Q8TEW0 1356 aa8.36□□□□□ -1.07
SPTA1-202ENST00000461624 NEXMIFQ5QGS0 1516 aa8.36□□□□□ -1.07
SPTA1-202ENST00000461624 LILRA1O75019 489 aa8.36□□□□□ -1.07
SPTA1-202ENST00000461624 EZH2Q15910 746 aaKnown RBP8.36□□□□□ -1.07
SPTA1-202ENST00000461624 RNF217Q8TC41 542 aa8.36□□□□□ -1.07
SPTA1-202ENST00000461624 POLMQ9NP87 494 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-202ENST00000461624 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
SPTA1-202ENST00000461624 RAB15P59190 212 aa8.35□□□□□ -1.07
SPTA1-202ENST00000461624 KANK4Q5T7N3 995 aaPredicted RBP8.35□□□□□ -1.07
SPTA1-202ENST00000461624 CASZ1Q86V15 1759 aa8.35□□□□□ -1.07
SPTA1-202ENST00000461624 SPATA31A3Q5VYP0 1347 aa8.34□□□□□ -1.07
SPTA1-202ENST00000461624 ITGA6P23229 1130 aa8.34□□□□□ -1.07
SPTA1-202ENST00000461624 PTGIRP43119 386 aa8.34□□□□□ -1.07
SPTA1-202ENST00000461624 KRT76Q01546 638 aa8.34□□□□□ -1.07
SPTA1-202ENST00000461624 XPCQ01831 940 aaPredicted RBP8.34□□□□□ -1.07
SPTA1-202ENST00000461624 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.07
SPTA1-202ENST00000461624 ANKRD50Q9ULJ7 1429 aa8.34□□□□□ -1.07
SPTA1-202ENST00000461624 HFM1A2PYH4 1435 aa8.33□□□□□ -1.08
SPTA1-202ENST00000461624 FAM182BQ5T319 152 aa8.33□□□□□ -1.08
SPTA1-202ENST00000461624 NRKQ7Z2Y5 1582 aa8.33□□□□□ -1.08
SPTA1-202ENST00000461624 ZNF395Q9H8N7 513 aaPredicted RBP8.33□□□□□ -1.08
SPTA1-202ENST00000461624 FOXO3O43524 673 aa8.32□□□□□ -1.08
SPTA1-202ENST00000461624 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
SPTA1-202ENST00000461624 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-202ENST00000461624 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-202ENST00000461624 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
SPTA1-202ENST00000461624 MYOM1P52179 1685 aa8.32□□□□□ -1.08
SPTA1-202ENST00000461624 KIF1AQ12756 1690 aa8.32□□□□□ -1.08
SPTA1-202ENST00000461624 CCDC144AA2RUR9 1427 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 TNS3Q68CZ2 1445 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 KCNQ2O43526 872 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 FBXO45P0C2W1 286 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 MCCD1P59942 119 aaPredicted RBP8.31□□□□□ -1.08
SPTA1-202ENST00000461624 CNTNAP3BQ96NU0 1288 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 COL25A1Q9BXS0 654 aaPredicted RBP8.31□□□□□ -1.08
SPTA1-202ENST00000461624 CNTNAP3Q9BZ76 1288 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 SPON1Q9HCB6 807 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 CYLDQ9NQC7 956 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 PCNTO95613 3336 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 FMN2Q9NZ56 1722 aa8.31□□□□□ -1.08
SPTA1-202ENST00000461624 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
SPTA1-202ENST00000461624 BANK1Q8NDB2 785 aa8.3□□□□□ -1.08
SPTA1-202ENST00000461624 NAIPQ13075 1403 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 VPS8Q8N3P4 1428 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 CDC14CA4D256 554 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 RNF20Q5VTR2 975 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 LYSMD3Q7Z3D4 306 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 LRPPRCP42704 1394 aaKnown RBP8.29□□□□□ -1.08
SPTA1-202ENST00000461624 RGPD3A6NKT7 1758 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms