RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ADH6P28332 368 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 DGKGP49619 791 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 NPM2Q86SE8 214 aaKnown RBP5.22□□□□□ -1.57
HDAC6-212ENST00000461608 PPARGC1BQ86YN6 1023 aaKnown RBP5.22□□□□□ -1.57
HDAC6-212ENST00000461608 RHBDD1Q8TEB9 315 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 SLAIN2Q9P270 581 aa5.22□□□□□ -1.57
HDAC6-212ENST00000461608 SOWAHDA6NJG2 315 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 TMEM229AB2RXF0 380 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 YBX3P16989 372 aaKnown RBP eCLIP5.21□□□□□ -1.58
HDAC6-212ENST00000461608 SF3B2Q13435 895 aaKnown RBP5.21□□□□□ -1.58
HDAC6-212ENST00000461608 LRP8Q14114 963 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 STAG2Q8N3U4 1231 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.21□□□□□ -1.58
HDAC6-212ENST00000461608 TSEN2Q8NCE0 465 aaKnown RBP5.21□□□□□ -1.58
HDAC6-212ENST00000461608 RGS22Q8NE09 1264 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 SLC4A9Q96Q91 983 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 PLVAPQ9BX97 442 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 CRISPLD1Q9H336 500 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 KLF15Q9UIH9 416 aa5.21□□□□□ -1.58
HDAC6-212ENST00000461608 DYRK3O43781 588 aa5.2□□□□□ -1.58
HDAC6-212ENST00000461608 RSPO4Q2I0M5 234 aaPredicted RBP5.2□□□□□ -1.58
HDAC6-212ENST00000461608 VTI1AQ96AJ9 217 aa5.2□□□□□ -1.58
HDAC6-212ENST00000461608 SERTAD1Q9UHV2 236 aa5.2□□□□□ -1.58
HDAC6-212ENST00000461608 PRR12Q9ULL5 1215 aa5.2□□□□□ -1.58
HDAC6-212ENST00000461608 IQSEC3Q9UPP2 1182 aaPredicted RBP5.2□□□□□ -1.58
HDAC6-212ENST00000461608 C21orf2O43822 256 aa5.19□□□□□ -1.58
HDAC6-212ENST00000461608 ITGB7P26010 798 aa5.19□□□□□ -1.58
HDAC6-212ENST00000461608 EPHA4P54764 986 aa5.19□□□□□ -1.58
HDAC6-212ENST00000461608 PSMA6P60900 246 aaKnown RBP5.19□□□□□ -1.58
HDAC6-212ENST00000461608 FKBP5Q13451 457 aaPredicted RBP5.19□□□□□ -1.58
HDAC6-212ENST00000461608 MTFR1Q15390 333 aa5.19□□□□□ -1.58
HDAC6-212ENST00000461608 PRSS36Q5K4E3 855 aa5.19□□□□□ -1.58
HDAC6-212ENST00000461608 GLYCTKQ8IVS8 523 aa5.19□□□□□ -1.58
HDAC6-212ENST00000461608 ZCCHC2Q9C0B9 1178 aaKnown RBP5.19□□□□□ -1.58
HDAC6-212ENST00000461608 DCDC2BA2VCK2 349 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 A6NJY4 79 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 H3BRB1 525 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 SERPINB4P48594 390 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 SMTNP53814 917 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 TRIM28Q13263 835 aaKnown RBP5.18□□□□□ -1.58
HDAC6-212ENST00000461608 HELQQ8TDG4 1101 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 PRIMPOLQ96LW4 560 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 TUT1Q9H6E5 874 aaKnown RBP5.18□□□□□ -1.58
HDAC6-212ENST00000461608 AVENQ9NQS1 362 aaPredicted RBP5.18□□□□□ -1.58
HDAC6-212ENST00000461608 TPSG1Q9NRR2 321 aa5.18□□□□□ -1.58
HDAC6-212ENST00000461608 SCHIP1Q9P0W5 487 aaPredicted RBP5.18□□□□□ -1.58
HDAC6-212ENST00000461608 ICMTO60725 284 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 ABL1P00519 1130 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 CD33P20138 364 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 HIRAP54198 1017 aaPredicted RBP5.17□□□□□ -1.58
HDAC6-212ENST00000461608 NKAPLQ5M9Q1 402 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 FCHSD1Q86WN1 690 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 BCL11AQ9H165 835 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 STRN4Q9NRL3 753 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 BIN2Q9UBW5 565 aaPredicted RBP5.17□□□□□ -1.58
HDAC6-212ENST00000461608 PARP3Q9Y6F1 533 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 GJA3Q9Y6H8 435 aa5.17□□□□□ -1.58
HDAC6-212ENST00000461608 ATAD2Q6PL18 1390 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 A0A1W2PNR3 127 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 CDK2AP1O14519 115 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 PPP1R12BO60237 982 aaPredicted RBP5.16□□□□□ -1.58
HDAC6-212ENST00000461608 FAM13AO94988 1023 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 POTEAQ6S8J7 498 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 SLC9A9Q8IVB4 645 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 ZDHHC1Q8WTX9 485 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 SCG3Q8WXD2 468 aaKnown RBP5.16□□□□□ -1.58
HDAC6-212ENST00000461608 AIDAQ96BJ3 306 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 ZIC5Q96T25 663 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 TSPAN10Q9H1Z9 355 aaPredicted RBP5.16□□□□□ -1.58
HDAC6-212ENST00000461608 PCDHGC4Q9Y5F7 938 aa5.16□□□□□ -1.58
HDAC6-212ENST00000461608 ATXN7O15265 892 aaPredicted RBP5.15□□□□□ -1.59
HDAC6-212ENST00000461608 MAPTP10636 758 aaKnown RBP5.15□□□□□ -1.59
HDAC6-212ENST00000461608 TXLNAP40222 546 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 FKBP4Q02790 459 aaKnown RBP eCLIP5.15□□□□□ -1.59
HDAC6-212ENST00000461608 TNP2Q05952 138 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 HIF1AQ16665 826 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 SH3PXD2AQ5TCZ1 1133 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 ALKBH2Q6NS38 261 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 C16orf46Q6P387 395 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 TNS4Q8IZW8 715 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 ABTB2Q8N961 1025 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 GTF3C2Q8WUA4 911 aaPredicted RBP5.15□□□□□ -1.59
HDAC6-212ENST00000461608 MKNK1Q9BUB5 465 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 C2orf49Q9BVC5 232 aaPredicted RBP5.15□□□□□ -1.59
HDAC6-212ENST00000461608 NIFKQ9BYG3 293 aaKnown RBP5.15□□□□□ -1.59
HDAC6-212ENST00000461608 DCTN4Q9UJW0 460 aa5.15□□□□□ -1.59
HDAC6-212ENST00000461608 C9orf172C9J069 976 aa5.14□□□□□ -1.59
HDAC6-212ENST00000461608 KHNYNO15037 678 aaKnown RBP5.14□□□□□ -1.59
HDAC6-212ENST00000461608 NPR3P17342 541 aa5.14□□□□□ -1.59
HDAC6-212ENST00000461608 ZNF211Q13398 564 aaPredicted RBP5.14□□□□□ -1.59
HDAC6-212ENST00000461608 TBCELQ5QJ74 424 aa5.14□□□□□ -1.59
HDAC6-212ENST00000461608 TRIM11Q96F44 468 aa5.14□□□□□ -1.59
HDAC6-212ENST00000461608 MYO19Q96H55 970 aa5.14□□□□□ -1.59
HDAC6-212ENST00000461608 GPC6Q9Y625 555 aaPredicted RBP5.14□□□□□ -1.59
HDAC6-212ENST00000461608 SERTM1A2A2V5 107 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 EFSO43281 561 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 HYAL3O43820 417 aaPredicted RBP5.13□□□□□ -1.59
HDAC6-212ENST00000461608 H2AFB1P0C5Y9 115 aa5.13□□□□□ -1.59
HDAC6-212ENST00000461608 H2AFB2P0C5Z0 115 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms