RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RHPN1Q8TCX5 695 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 DMRTB1Q96MA1 342 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 CITED4Q96RK1 184 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 KLK14Q9P0G3 267 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 LRFN2Q9ULH4 789 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 RHOQP17081 205 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 TATP17735 454 aaPredicted RBP5.15□□□□□ -1.59
VCL-203ENST00000461383 IRS1P35568 1242 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 ZAP70P43403 619 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 USP5P45974 858 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 MAPK8P45983 427 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 PHKA2P46019 1235 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 FGD1P98174 961 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 DNM1Q05193 864 aaKnown RBP5.15□□□□□ -1.59
VCL-203ENST00000461383 DBN1Q16643 649 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 C1orf53Q5VUE5 145 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 BICDL1Q6ZP65 573 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 ATCAYQ86WG3 371 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 IFT43Q96FT9 208 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 NEUROD4Q9HD90 331 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 ENAMQ9NRM1 1142 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 CCDC87Q9NVE4 849 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 IGF1RP08069 1367 aa5.15□□□□□ -1.59
VCL-203ENST00000461383 FZD6O60353 706 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 TXLNAP40222 546 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 ATP2B2Q01814 1243 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 PLCB3Q01970 1234 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 COL19A1Q14993 1142 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 C4orf17Q53FE4 359 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 FOXR1Q6PIV2 292 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 POTEAQ6S8J7 498 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 EDEM1Q92611 657 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 FAM13BQ9NYF5 915 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 POLIQ9UNA4 740 aa5.14□□□□□ -1.59
VCL-203ENST00000461383 ZBTB39O15060 712 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 P4HBP07237 508 aaKnown RBP5.13□□□□□ -1.59
VCL-203ENST00000461383 BCRP11274 1271 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 MZF1P28698 734 aaPredicted RBP5.13□□□□□ -1.59
VCL-203ENST00000461383 ITGAEP38570 1179 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 XPCQ01831 940 aaPredicted RBP5.13□□□□□ -1.59
VCL-203ENST00000461383 C8orf34Q49A92 452 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 TREML1Q86YW5 311 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 ETFBKMTQ8IXQ9 262 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 MRS2Q9HD23 443 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 ZDHHC3Q9NYG2 299 aa5.13□□□□□ -1.59
VCL-203ENST00000461383 PHF20L1A8MW92 1017 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 TREHO43280 583 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 RPLP1P05386 114 aaKnown RBP5.12□□□□□ -1.59
VCL-203ENST00000461383 THBS1P07996 1170 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 EHHADHQ08426 723 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 POU4F2Q12837 409 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 LBRQ14739 615 aaKnown RBP5.12□□□□□ -1.59
VCL-203ENST00000461383 ARSJQ5FYB0 599 aaPredicted RBP5.12□□□□□ -1.59
VCL-203ENST00000461383 FBXO33Q7Z6M2 555 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 GPR152Q8TDT2 470 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 ACDQ96AP0 544 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 TRERF1Q96PN7 1200 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 CFHR5Q9BXR6 569 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 ANKIB1Q9P2G1 1089 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 GJA3Q9Y6H8 435 aa5.12□□□□□ -1.59
VCL-203ENST00000461383 GPR25O00155 361 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 MICAL2O94851 1124 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 F11P03951 625 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 PDGFAP04085 211 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 LDHBP07195 334 aaKnown RBP5.11□□□□□ -1.59
VCL-203ENST00000461383 TAGLNQ01995 201 aaKnown RBP5.11□□□□□ -1.59
VCL-203ENST00000461383 UBAP2LQ14157 1087 aaKnown RBP5.11□□□□□ -1.59
VCL-203ENST00000461383 FAM26DQ5JW98 314 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 RIPOR1Q6ZS17 1223 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 ZNF295-AS1Q8N0V1 137 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 PIK3R5Q8WYR1 880 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 GTPBP3Q969Y2 492 aaKnown RBP5.11□□□□□ -1.59
VCL-203ENST00000461383 FAM129BQ96TA1 746 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 NIF3L1Q9GZT8 377 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 NUCKS1Q9H1E3 243 aaKnown RBP5.11□□□□□ -1.59
VCL-203ENST00000461383 TIMMDC1Q9NPL8 285 aa5.11□□□□□ -1.59
VCL-203ENST00000461383 KIAA1522Q9P206 1035 aaPredicted RBP5.11□□□□□ -1.59
VCL-203ENST00000461383 NSFL1CQ9UNZ2 370 aaKnown RBP5.11□□□□□ -1.59
VCL-203ENST00000461383 TGFBR3LH3BV60 316 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 GPR182O15218 404 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 OIP5O43482 229 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 NEFLP07196 543 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 MX2P20592 715 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 MAP2K3P46734 347 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 FMR1Q06787 632 aaKnown RBP eCLIP5.1□□□□□ -1.59
VCL-203ENST00000461383 TSNAXIP1Q2TAA8 658 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 NUDT16Q96DE0 195 aaKnown RBP5.1□□□□□ -1.59
VCL-203ENST00000461383 HSH2DQ96JZ2 352 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 SUSD3Q96L08 255 aa5.1□□□□□ -1.59
VCL-203ENST00000461383 GAS2L1Q99501 681 aaPredicted RBP5.1□□□□□ -1.59
VCL-203ENST00000461383 GPC6Q9Y625 555 aaPredicted RBP5.1□□□□□ -1.59
VCL-203ENST00000461383 PNMA6FA0A0J9YX94 578 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 A0A1B0GTH6 734 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 PRPF40AO75400 957 aaKnown RBP5.09□□□□□ -1.59
VCL-203ENST00000461383 ITGB2P05107 769 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 IDH3AP50213 366 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 DSC3Q14574 896 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 GPAT2Q6NUI2 795 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 LRRC69Q6ZNQ3 347 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 GJD3Q8N144 294 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms