RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NUP98P52948 1817 aa17.06■□□□□ 0.32
RAB11FIP3-207ENST00000461009 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
RAB11FIP3-207ENST00000461009 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
RAB11FIP3-207ENST00000461009 DDX21Q9NR30 783 aaKnown RBP eCLIP17.06■□□□□ 0.32
RAB11FIP3-207ENST00000461009 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 PDIA6Q15084 440 aa17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 SUSD4Q5VX71 490 aa17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 COPS6Q7L5N1 327 aa17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 C8orf58Q8NAV2 365 aa17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
RAB11FIP3-207ENST00000461009 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 CCDC88AQ3V6T2 1871 aa17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 PRELPP51888 382 aa17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 CCDC30Q5VVM6 783 aa17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 XAGE3Q8WTP9 111 aa17.04■□□□□ 0.32
RAB11FIP3-207ENST00000461009 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 UBN2Q6ZU65 1347 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 ARFGEF2Q9Y6D5 1785 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 ANXA1P04083 346 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 CRY2Q49AN0 593 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 C7orf43Q8WVR3 580 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
RAB11FIP3-207ENST00000461009 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
RAB11FIP3-207ENST00000461009 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
RAB11FIP3-207ENST00000461009 TWISTNBQ3B726 338 aaPredicted RBP17.02■□□□□ 0.32
RAB11FIP3-207ENST00000461009 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.32
RAB11FIP3-207ENST00000461009 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
RAB11FIP3-207ENST00000461009 E9PSI1 815 aa17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 NTSR2O95665 410 aa17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 HOXA10P31260 410 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 CRAMP1Q96RY5 1269 aa17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
RAB11FIP3-207ENST00000461009 SLC10A5Q5PT55 438 aa17■□□□□ 0.31
RAB11FIP3-207ENST00000461009 ANKRD13DQ6ZTN6 518 aa17■□□□□ 0.31
RAB11FIP3-207ENST00000461009 TSPYL6Q8N831 410 aa17■□□□□ 0.31
RAB11FIP3-207ENST00000461009 STK31Q9BXU1 1019 aa17■□□□□ 0.31
RAB11FIP3-207ENST00000461009 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
RAB11FIP3-207ENST00000461009 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
RAB11FIP3-207ENST00000461009 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
RAB11FIP3-207ENST00000461009 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
RAB11FIP3-207ENST00000461009 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
RAB11FIP3-207ENST00000461009 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
RAB11FIP3-207ENST00000461009 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
RAB11FIP3-207ENST00000461009 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
RAB11FIP3-207ENST00000461009 ZNF277Q9NRM2 450 aaPredicted RBP16.99■□□□□ 0.31
RAB11FIP3-207ENST00000461009 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
RAB11FIP3-207ENST00000461009 IARSP41252 1262 aaKnown RBP16.98■□□□□ 0.31
RAB11FIP3-207ENST00000461009 NLRP10Q86W26 655 aa16.98■□□□□ 0.31
RAB11FIP3-207ENST00000461009 PSMD1Q99460 953 aa16.98■□□□□ 0.31
RAB11FIP3-207ENST00000461009 SH3TC1Q8TE82 1336 aa16.97■□□□□ 0.31
RAB11FIP3-207ENST00000461009 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
RAB11FIP3-207ENST00000461009 VAMP4O75379 141 aa16.97■□□□□ 0.31
RAB11FIP3-207ENST00000461009 DDNO94850 711 aaPredicted RBP16.96■□□□□ 0.31
RAB11FIP3-207ENST00000461009 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
RAB11FIP3-207ENST00000461009 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
RAB11FIP3-207ENST00000461009 OLFM4Q6UX06 510 aa16.96■□□□□ 0.31
RAB11FIP3-207ENST00000461009 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
RAB11FIP3-207ENST00000461009 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
RAB11FIP3-207ENST00000461009 BBOX1O75936 387 aa16.95■□□□□ 0.3
RAB11FIP3-207ENST00000461009 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
RAB11FIP3-207ENST00000461009 HSP90B1P14625 803 aaKnown RBP16.95■□□□□ 0.3
RAB11FIP3-207ENST00000461009 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
RAB11FIP3-207ENST00000461009 WDR90Q96KV7 1748 aa16.95■□□□□ 0.3
RAB11FIP3-207ENST00000461009 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
RAB11FIP3-207ENST00000461009 EIF6P56537 245 aaKnown RBP16.94■□□□□ 0.3
RAB11FIP3-207ENST00000461009 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
RAB11FIP3-207ENST00000461009 POTECB2RU33 542 aa16.93■□□□□ 0.3
RAB11FIP3-207ENST00000461009 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
RAB11FIP3-207ENST00000461009 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
RAB11FIP3-207ENST00000461009 VPS33BQ9H267 617 aa16.93■□□□□ 0.3
RAB11FIP3-207ENST00000461009 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
RAB11FIP3-207ENST00000461009 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
RAB11FIP3-207ENST00000461009 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 FZD9O00144 591 aa16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 CHADLQ6NUI6 762 aa16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 C3orf67Q6ZVT6 689 aa16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 TMC4Q7Z404 712 aa16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 CDCA7LQ96GN5 454 aa16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 L3MBTL3Q96JM7 780 aaPredicted RBP16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 ABCC4O15439 1325 aa16.92■□□□□ 0.3
RAB11FIP3-207ENST00000461009 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
RAB11FIP3-207ENST00000461009 SP8Q8IXZ3 490 aa16.91■□□□□ 0.3
RAB11FIP3-207ENST00000461009 NIM1KQ8IY84 436 aa16.91■□□□□ 0.3
RAB11FIP3-207ENST00000461009 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
RAB11FIP3-207ENST00000461009 GPC2Q8N158 579 aa16.91■□□□□ 0.3
RAB11FIP3-207ENST00000461009 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms