RNA–Protein interactions for RNA: ENST00000460838.5

CCDC66-210, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-210ENST00000460838 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
CCDC66-210ENST00000460838 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
CCDC66-210ENST00000460838 C4AP0C0L4 1744 aa12.36□□□□□ -0.43
CCDC66-210ENST00000460838 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
CCDC66-210ENST00000460838 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
CCDC66-210ENST00000460838 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
CCDC66-210ENST00000460838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
CCDC66-210ENST00000460838 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
CCDC66-210ENST00000460838 STARD3NLO95772 234 aa12.34□□□□□ -0.43
CCDC66-210ENST00000460838 SSFA2P28290 1259 aa12.34□□□□□ -0.43
CCDC66-210ENST00000460838 NBR1Q14596 966 aa12.34□□□□□ -0.43
CCDC66-210ENST00000460838 COL23A1Q86Y22 540 aaPredicted RBP12.34□□□□□ -0.43
CCDC66-210ENST00000460838 TEX13AQ9BXU3 409 aaPredicted RBP12.34□□□□□ -0.43
CCDC66-210ENST00000460838 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
CCDC66-210ENST00000460838 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
CCDC66-210ENST00000460838 PHF14O94880 888 aa12.33□□□□□ -0.44
CCDC66-210ENST00000460838 A1BGP04217 495 aa12.33□□□□□ -0.44
CCDC66-210ENST00000460838 PDIA6Q15084 440 aa12.33□□□□□ -0.44
CCDC66-210ENST00000460838 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
CCDC66-210ENST00000460838 NBPF26B4DH59 902 aa12.32□□□□□ -0.44
CCDC66-210ENST00000460838 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
CCDC66-210ENST00000460838 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
CCDC66-210ENST00000460838 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
CCDC66-210ENST00000460838 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
CCDC66-210ENST00000460838 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
CCDC66-210ENST00000460838 RTCBQ9Y3I0 505 aaKnown RBP12.32□□□□□ -0.44
CCDC66-210ENST00000460838 COL15A1P39059 1388 aa12.31□□□□□ -0.44
CCDC66-210ENST00000460838 HOXB7P09629 217 aa12.31□□□□□ -0.44
CCDC66-210ENST00000460838 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
CCDC66-210ENST00000460838 EIF5P55010 431 aaKnown RBP12.31□□□□□ -0.44
CCDC66-210ENST00000460838 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
CCDC66-210ENST00000460838 FLAD1Q8NFF5 587 aa12.31□□□□□ -0.44
CCDC66-210ENST00000460838 SRCAPQ6ZRS2 3230 aa12.31□□□□□ -0.44
CCDC66-210ENST00000460838 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
CCDC66-210ENST00000460838 IL6STP40189 918 aaPredicted RBP12.3□□□□□ -0.44
CCDC66-210ENST00000460838 HNRNPUQ00839 825 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC66-210ENST00000460838 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
CCDC66-210ENST00000460838 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
CCDC66-210ENST00000460838 LRP5O75197 1615 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 SCN7AQ01118 1682 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 ELL2O00472 640 aaPredicted RBP12.29□□□□□ -0.44
CCDC66-210ENST00000460838 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 LRP10Q7Z4F1 713 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 MYH16Q9H6N6 1097 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
CCDC66-210ENST00000460838 BCORQ6W2J9 1755 aa12.28□□□□□ -0.44
CCDC66-210ENST00000460838 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
CCDC66-210ENST00000460838 E9PSI1 815 aa12.28□□□□□ -0.44
CCDC66-210ENST00000460838 EIF2S2P20042 333 aaKnown RBP12.28□□□□□ -0.44
CCDC66-210ENST00000460838 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
CCDC66-210ENST00000460838 PROSER3Q2NL68 480 aa12.28□□□□□ -0.44
CCDC66-210ENST00000460838 LCE2DQ5TA82 110 aaPredicted RBP12.28□□□□□ -0.44
CCDC66-210ENST00000460838 TRMT2AQ8IZ69 625 aaKnown RBP12.28□□□□□ -0.44
CCDC66-210ENST00000460838 SLC16A10Q8TF71 515 aa12.28□□□□□ -0.44
CCDC66-210ENST00000460838 DDX12PQ92771 950 aa12.28□□□□□ -0.44
CCDC66-210ENST00000460838 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
CCDC66-210ENST00000460838 SRP68Q9UHB9 627 aaKnown RBP12.28□□□□□ -0.44
CCDC66-210ENST00000460838 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
CCDC66-210ENST00000460838 PTGER2P43116 358 aa12.27□□□□□ -0.45
CCDC66-210ENST00000460838 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
CCDC66-210ENST00000460838 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
CCDC66-210ENST00000460838 ZNF454Q8N9F8 522 aa12.27□□□□□ -0.45
CCDC66-210ENST00000460838 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
CCDC66-210ENST00000460838 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
CCDC66-210ENST00000460838 SEMA3EO15041 775 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 ANXA1P04083 346 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 GYS1P13807 737 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 RFC4P35249 363 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 TWISTNBQ3B726 338 aaPredicted RBP12.26□□□□□ -0.45
CCDC66-210ENST00000460838 MSL1Q68DK7 614 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 CHPF2Q9P2E5 772 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 NARFQ9UHQ1 456 aa12.26□□□□□ -0.45
CCDC66-210ENST00000460838 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
CCDC66-210ENST00000460838 MYL6BP14649 208 aa12.25□□□□□ -0.45
CCDC66-210ENST00000460838 PPP4R3BQ5MIZ7 849 aa12.25□□□□□ -0.45
CCDC66-210ENST00000460838 DDX21Q9NR30 783 aaKnown RBP eCLIP12.25□□□□□ -0.45
CCDC66-210ENST00000460838 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
CCDC66-210ENST00000460838 A0A087WZG4 1122 aa12.24□□□□□ -0.45
CCDC66-210ENST00000460838 VAMP4O75379 141 aa12.24□□□□□ -0.45
CCDC66-210ENST00000460838 CAMTA2O94983 1202 aa12.24□□□□□ -0.45
CCDC66-210ENST00000460838 USPL1Q5W0Q7 1092 aa12.24□□□□□ -0.45
CCDC66-210ENST00000460838 TTLL7Q6ZT98 887 aa12.24□□□□□ -0.45
CCDC66-210ENST00000460838 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
CCDC66-210ENST00000460838 SPON1Q9HCB6 807 aa12.24□□□□□ -0.45
CCDC66-210ENST00000460838 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
CCDC66-210ENST00000460838 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
CCDC66-210ENST00000460838 SMYD5Q6GMV2 418 aa12.23□□□□□ -0.45
CCDC66-210ENST00000460838 ZPR1O75312 459 aa12.22□□□□□ -0.45
CCDC66-210ENST00000460838 CCDC30Q5VVM6 783 aa12.22□□□□□ -0.45
CCDC66-210ENST00000460838 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
CCDC66-210ENST00000460838 HS3ST6Q96QI5 342 aa12.22□□□□□ -0.45
CCDC66-210ENST00000460838 MAP3K15Q6ZN16 1313 aa12.21□□□□□ -0.45
CCDC66-210ENST00000460838 TCERG1O14776 1098 aaKnown RBP12.21□□□□□ -0.45
CCDC66-210ENST00000460838 FOSBP53539 338 aa12.21□□□□□ -0.45
CCDC66-210ENST00000460838 DDR1Q08345 913 aa12.21□□□□□ -0.45
CCDC66-210ENST00000460838 HLFQ16534 295 aa12.21□□□□□ -0.45
CCDC66-210ENST00000460838 POTEGQ6S5H5 508 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms