RNA–Protein interactions for RNA: ENST00000460609.3

RN7SL254P-201, Transcript of RNA, 7SL, cytoplasmic 254, pseudogene, humanhuman

BASIC

Gene RN7SL254P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL254P-201ENST00000460609 GPTP24298 496 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 HOXA10P31260 410 aaPredicted RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 WDR43Q15061 677 aaKnown RBP eCLIP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 EAPPQ56P03 285 aaPredicted RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 NUTM1Q86Y26 1132 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 GPC2Q8N158 579 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 SUPT20HQ8NEM7 779 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 THUMPD2Q9BTF0 503 aaKnown RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 TAF1DQ9H5J8 278 aaPredicted RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 CLEC11AQ9Y240 323 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 MYBBP1AQ9BQG0 1328 aaKnown RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 ABCC12Q96J65 1359 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 FZD9O00144 591 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 PPEF1O14829 653 aaPredicted RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 EIF2S2P20042 333 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 EPHX2P34913 555 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 TMPOP42166 694 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 SUSD4Q5VX71 490 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 TTLL7Q6ZT98 887 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 NIM1KQ8IY84 436 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 UTP14AQ9BVJ6 771 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 NUP98P52948 1817 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 NTSR2O95665 410 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 HOXB7P09629 217 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 AIDAQ96BJ3 306 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 UBN2Q6ZU65 1347 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 BBOX1O75936 387 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 CHMP4AQ9BY43 222 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 DDX21Q9NR30 783 aaKnown RBP eCLIP8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 MKRN1Q9UHC7 482 aaKnown RBP8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 SH3TC1Q8TE82 1336 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 PASKQ96RG2 1323 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 CNTNAP1P78357 1384 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 PPIP5K2O43314 1243 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 POTEIP0CG38 1075 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 POTEJP0CG39 1038 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 HSP90B1P14625 803 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 CALD1Q05682 793 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 AIMP1Q12904 312 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 SLC10A5Q5PT55 438 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 OLFM4Q6UX06 510 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 COPS6Q7L5N1 327 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 CNTROBQ8N137 903 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 ATP6V0A2Q9Y487 856 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 LAS1LQ9Y4W2 734 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 GJA3Q9Y6H8 435 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 CHL1O00533 1208 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 DDX10Q13206 875 aaKnown RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 TCIRG1Q13488 830 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 PDIA6Q15084 440 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 DPP8Q6V1X1 898 aaPredicted RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 USP50Q70EL3 339 aaPredicted RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 SNED1Q8TER0 1413 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 XAGE3Q8WTP9 111 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 TRMT112Q9UI30 125 aaKnown RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 ABT1Q9ULW3 272 aaKnown RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 ABCC4O15439 1325 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 CDHR2Q9BYE9 1310 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 TCERG1O14776 1098 aaKnown RBP8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ECE1P42892 770 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 GRAPQ13588 217 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 TNIP1Q15025 636 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 AOC3Q16853 763 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 FAM161AQ3B820 660 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 LRP10Q7Z4F1 713 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 NLRP10Q86W26 655 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 SP8Q8IXZ3 490 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 CCDC146Q8IYE0 955 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 MPNDQ8N594 471 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 PLBD2Q8NHP8 589 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 GRAPLQ8TC17 118 aaPredicted RBP8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 NECTIN2Q92692 538 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 HYPKQ9NX55 129 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ZNRF3Q9ULT6 936 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ANXA1P04083 346 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 CTCFP49711 727 aaPredicted RBP8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 MAP2K1Q02750 393 aaPredicted RBP8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 GOLGA2Q08379 1002 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 PROSER3Q2NL68 480 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 MAP1SQ66K74 1059 aaPredicted RBP8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 ANKRD13DQ6ZTN6 518 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 CFAP44Q96MT7 982 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms