RNA–Protein interactions for RNA: ENST00000460609.3

RN7SL254P-201, Transcript of RNA, 7SL, cytoplasmic 254, pseudogene, humanhuman

BASIC

Gene RN7SL254P, Length 284 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL254P-201ENST00000460609 GPTP24298 496 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 HOXA10P31260 410 aaPredicted RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 WDR43Q15061 677 aaKnown RBP eCLIP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 EAPPQ56P03 285 aaPredicted RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 NUTM1Q86Y26 1132 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 GPC2Q8N158 579 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 SUPT20HQ8NEM7 779 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 THUMPD2Q9BTF0 503 aaKnown RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 TAF1DQ9H5J8 278 aaPredicted RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 CLEC11AQ9Y240 323 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 MYBBP1AQ9BQG0 1328 aaKnown RBP8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 ABCC12Q96J65 1359 aa8.21□□□□□ -1.1
RN7SL254P-201ENST00000460609 FZD9O00144 591 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 PPEF1O14829 653 aaPredicted RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 EIF2S2P20042 333 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 EPHX2P34913 555 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 TMPOP42166 694 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 SUSD4Q5VX71 490 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 TTLL7Q6ZT98 887 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 NIM1KQ8IY84 436 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 UTP14AQ9BVJ6 771 aaKnown RBP8.2□□□□□ -1.1
RN7SL254P-201ENST00000460609 NUP98P52948 1817 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 NTSR2O95665 410 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 HOXB7P09629 217 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 AIDAQ96BJ3 306 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 UBN2Q6ZU65 1347 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
RN7SL254P-201ENST00000460609 BBOX1O75936 387 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 CHMP4AQ9BY43 222 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 DDX21Q9NR30 783 aaKnown RBP eCLIP8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 MKRN1Q9UHC7 482 aaKnown RBP8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 SH3TC1Q8TE82 1336 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 PASKQ96RG2 1323 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 CNTNAP1P78357 1384 aa8.18□□□□□ -1.1
RN7SL254P-201ENST00000460609 PPIP5K2O43314 1243 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 POTEIP0CG38 1075 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 POTEJP0CG39 1038 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 HSP90B1P14625 803 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 CALD1Q05682 793 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 AIMP1Q12904 312 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 SLC10A5Q5PT55 438 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 OLFM4Q6UX06 510 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 COPS6Q7L5N1 327 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 CNTROBQ8N137 903 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 ATP6V0A2Q9Y487 856 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 LAS1LQ9Y4W2 734 aaKnown RBP8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 GJA3Q9Y6H8 435 aa8.17□□□□□ -1.1
RN7SL254P-201ENST00000460609 CHL1O00533 1208 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 DDX10Q13206 875 aaKnown RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 TCIRG1Q13488 830 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 PDIA6Q15084 440 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 DPP8Q6V1X1 898 aaPredicted RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 USP50Q70EL3 339 aaPredicted RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 SNED1Q8TER0 1413 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 XAGE3Q8WTP9 111 aa8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 TRMT112Q9UI30 125 aaKnown RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 ABT1Q9ULW3 272 aaKnown RBP8.16□□□□□ -1.1
RN7SL254P-201ENST00000460609 ABCC4O15439 1325 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 CDHR2Q9BYE9 1310 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 TCERG1O14776 1098 aaKnown RBP8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ECE1P42892 770 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 GRAPQ13588 217 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 TNIP1Q15025 636 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 AOC3Q16853 763 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 FAM161AQ3B820 660 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 LRP10Q7Z4F1 713 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 NLRP10Q86W26 655 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 SP8Q8IXZ3 490 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 CCDC146Q8IYE0 955 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 MPNDQ8N594 471 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 PLBD2Q8NHP8 589 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 GRAPLQ8TC17 118 aaPredicted RBP8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 NECTIN2Q92692 538 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 HYPKQ9NX55 129 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ZNRF3Q9ULT6 936 aa8.15□□□□□ -1.1
RN7SL254P-201ENST00000460609 ANXA1P04083 346 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 CTCFP49711 727 aaPredicted RBP8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 MAP2K1Q02750 393 aaPredicted RBP8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 GOLGA2Q08379 1002 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 PROSER3Q2NL68 480 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 MAP1SQ66K74 1059 aaPredicted RBP8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 ANKRD13DQ6ZTN6 518 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 CFAP44Q96MT7 982 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
RN7SL254P-201ENST00000460609 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms