RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 TMEM88BA6NKF7 163 aa28.65■■■□□ 2.18
PDE6B-203ENST00000460119 EIF2S2P20042 333 aaKnown RBP28.65■■■□□ 2.18
PDE6B-203ENST00000460119 CNTROBQ8N137 903 aa28.65■■■□□ 2.18
PDE6B-203ENST00000460119 JDP2Q8WYK2 163 aa28.65■■■□□ 2.18
PDE6B-203ENST00000460119 FOXN1O15353 648 aa28.64■■■□□ 2.18
PDE6B-203ENST00000460119 ANXA1P04083 346 aa28.64■■■□□ 2.18
PDE6B-203ENST00000460119 GPC2Q8N158 579 aa28.64■■■□□ 2.18
PDE6B-203ENST00000460119 SNED1Q8TER0 1413 aa28.63■■■□□ 2.17
PDE6B-203ENST00000460119 NTSR2O95665 410 aa28.63■■■□□ 2.17
PDE6B-203ENST00000460119 PDIA6Q15084 440 aa28.63■■■□□ 2.17
PDE6B-203ENST00000460119 GIGYF2Q6Y7W6 1299 aaKnown RBP28.63■■■□□ 2.17
PDE6B-203ENST00000460119 RBM17Q96I25 401 aaKnown RBP28.63■■■□□ 2.17
PDE6B-203ENST00000460119 TSPYL4Q9UJ04 414 aa28.63■■■□□ 2.17
PDE6B-203ENST00000460119 PROSER3Q2NL68 480 aa28.62■■■□□ 2.17
PDE6B-203ENST00000460119 CC2D2BQ6DHV5 1058 aa28.62■■■□□ 2.17
PDE6B-203ENST00000460119 PNMA8AQ86V59 439 aaPredicted RBP28.62■■■□□ 2.17
PDE6B-203ENST00000460119 MAPK8IP3Q9UPT6 1336 aa28.62■■■□□ 2.17
PDE6B-203ENST00000460119 ARFGEF2Q9Y6D5 1785 aa28.61■■■□□ 2.17
PDE6B-203ENST00000460119 EIF6P56537 245 aaKnown RBP28.61■■■□□ 2.17
PDE6B-203ENST00000460119 FMR1Q06787 632 aaKnown RBP eCLIP28.61■■■□□ 2.17
PDE6B-203ENST00000460119 LARGE2Q8N3Y3 721 aa28.61■■■□□ 2.17
PDE6B-203ENST00000460119 CRAMP1Q96RY5 1269 aa28.61■■■□□ 2.17
PDE6B-203ENST00000460119 PPEF1O14829 653 aaPredicted RBP28.6■■■□□ 2.17
PDE6B-203ENST00000460119 RIPK4P57078 832 aa28.6■■■□□ 2.17
PDE6B-203ENST00000460119 LRP10Q7Z4F1 713 aa28.6■■■□□ 2.17
PDE6B-203ENST00000460119 NECTIN2Q92692 538 aa28.6■■■□□ 2.17
PDE6B-203ENST00000460119 COL4A5P29400 1685 aa28.59■■■□□ 2.17
PDE6B-203ENST00000460119 EPS15P42566 896 aa28.59■■■□□ 2.17
PDE6B-203ENST00000460119 PNNQ9H307 717 aaKnown RBP28.58■■■□□ 2.17
PDE6B-203ENST00000460119 PPP1R42Q7Z4L9 355 aa28.57■■■□□ 2.16
PDE6B-203ENST00000460119 PCNTO95613 3336 aa28.57■■■□□ 2.16
PDE6B-203ENST00000460119 ZNF428Q96B54 188 aa28.56■■■□□ 2.16
PDE6B-203ENST00000460119 NLRP3Q96P20 1036 aa28.56■■■□□ 2.16
PDE6B-203ENST00000460119 UTP14AQ9BVJ6 771 aaKnown RBP28.56■■■□□ 2.16
PDE6B-203ENST00000460119 ERBB4Q15303 1308 aa28.55■■■□□ 2.16
PDE6B-203ENST00000460119 SCNN1DP51172 638 aa28.55■■■□□ 2.16
PDE6B-203ENST00000460119 AIMP1Q12904 312 aaKnown RBP28.55■■■□□ 2.16
PDE6B-203ENST00000460119 DEFB115Q30KQ5 88 aa28.55■■■□□ 2.16
PDE6B-203ENST00000460119 PARP10Q53GL7 1025 aa28.54■■■□□ 2.16
PDE6B-203ENST00000460119 SLC10A5Q5PT55 438 aa28.54■■■□□ 2.16
PDE6B-203ENST00000460119 IBTKQ9P2D0 1353 aaPredicted RBP28.53■■■□□ 2.16
PDE6B-203ENST00000460119 HCLS1P14317 486 aaPredicted RBP28.53■■■□□ 2.16
PDE6B-203ENST00000460119 LMOD1P29536 600 aaPredicted RBP28.53■■■□□ 2.16
PDE6B-203ENST00000460119 AOC3Q16853 763 aa28.53■■■□□ 2.16
PDE6B-203ENST00000460119 COPS6Q7L5N1 327 aa28.53■■■□□ 2.16
PDE6B-203ENST00000460119 ABT1Q9ULW3 272 aaKnown RBP28.53■■■□□ 2.16
PDE6B-203ENST00000460119 SCN4AP35499 1836 aa28.53■■■□□ 2.16
PDE6B-203ENST00000460119 PPIP5K2O43314 1243 aa28.52■■■□□ 2.16
PDE6B-203ENST00000460119 TMPOP42166 694 aaKnown RBP28.52■■■□□ 2.16
PDE6B-203ENST00000460119 KRT24Q2M2I5 525 aa28.52■■■□□ 2.16
PDE6B-203ENST00000460119 NIM1KQ8IY84 436 aa28.52■■■□□ 2.16
PDE6B-203ENST00000460119 XAGE3Q8WTP9 111 aa28.52■■■□□ 2.16
PDE6B-203ENST00000460119 DDX21Q9NR30 783 aaKnown RBP eCLIP28.52■■■□□ 2.16
PDE6B-203ENST00000460119 WBP1LQ9NX94 342 aa28.52■■■□□ 2.16
PDE6B-203ENST00000460119 ATP6V0A2Q9Y487 856 aa28.52■■■□□ 2.16
PDE6B-203ENST00000460119 KDM3BQ7LBC6 1761 aa28.52■■■□□ 2.16
PDE6B-203ENST00000460119 RASSF10A6NK89 507 aa28.51■■■□□ 2.15
PDE6B-203ENST00000460119 AIDAQ96BJ3 306 aa28.51■■■□□ 2.15
PDE6B-203ENST00000460119 RIC1Q4ADV7 1423 aa28.51■■■□□ 2.15
PDE6B-203ENST00000460119 TRAF5O00463 557 aa28.5■■■□□ 2.15
PDE6B-203ENST00000460119 CTCFP49711 727 aaPredicted RBP28.5■■■□□ 2.15
PDE6B-203ENST00000460119 NEUROD2Q15784 382 aa28.5■■■□□ 2.15
PDE6B-203ENST00000460119 GRIPAP1Q4V328 841 aa28.5■■■□□ 2.15
PDE6B-203ENST00000460119 LAMB4A4D0S4 1761 aa28.5■■■□□ 2.15
PDE6B-203ENST00000460119 ABCC4O15439 1325 aa28.49■■■□□ 2.15
PDE6B-203ENST00000460119 LBX1P52954 281 aa28.49■■■□□ 2.15
PDE6B-203ENST00000460119 NLRP10Q86W26 655 aa28.49■■■□□ 2.15
PDE6B-203ENST00000460119 CCDC146Q8IYE0 955 aa28.49■■■□□ 2.15
PDE6B-203ENST00000460119 PRDM10Q9NQV6 1147 aa28.49■■■□□ 2.15
PDE6B-203ENST00000460119 DLG5Q8TDM6 1919 aa28.48■■■□□ 2.15
PDE6B-203ENST00000460119 NUP98P52948 1817 aa28.48■■■□□ 2.15
PDE6B-203ENST00000460119 WDR33Q9C0J8 1336 aaKnown RBP28.47■■■□□ 2.15
PDE6B-203ENST00000460119 CXCL9Q07325 125 aa28.47■■■□□ 2.15
PDE6B-203ENST00000460119 TMX4Q9H1E5 349 aaPredicted RBP28.47■■■□□ 2.15
PDE6B-203ENST00000460119 LAS1LQ9Y4W2 734 aaKnown RBP28.46■■■□□ 2.15
PDE6B-203ENST00000460119 ADAMTSL1Q8N6G6 1762 aa28.46■■■□□ 2.15
PDE6B-203ENST00000460119 TCIRG1Q13488 830 aa28.45■■■□□ 2.14
PDE6B-203ENST00000460119 CST9Q5W186 159 aa28.45■■■□□ 2.14
PDE6B-203ENST00000460119 USP50Q70EL3 339 aaPredicted RBP28.45■■■□□ 2.14
PDE6B-203ENST00000460119 BABAM1Q9NWV8 329 aa28.45■■■□□ 2.14
PDE6B-203ENST00000460119 TRMT112Q9UI30 125 aaKnown RBP28.45■■■□□ 2.14
PDE6B-203ENST00000460119 ZNRF3Q9ULT6 936 aa28.45■■■□□ 2.14
PDE6B-203ENST00000460119 LTBP1Q14766 1721 aa28.44■■■□□ 2.14
PDE6B-203ENST00000460119 BBOX1O75936 387 aa28.44■■■□□ 2.14
PDE6B-203ENST00000460119 GRM1Q13255 1194 aa28.44■■■□□ 2.14
PDE6B-203ENST00000460119 SP8Q8IXZ3 490 aa28.44■■■□□ 2.14
PDE6B-203ENST00000460119 RALBP1Q15311 655 aa28.43■■■□□ 2.14
PDE6B-203ENST00000460119 DPP8Q6V1X1 898 aaPredicted RBP28.43■■■□□ 2.14
PDE6B-203ENST00000460119 PAXIP1Q6ZW49 1069 aaPredicted RBP28.43■■■□□ 2.14
PDE6B-203ENST00000460119 MPNDQ8N594 471 aa28.43■■■□□ 2.14
PDE6B-203ENST00000460119 RTFDC1Q9BY42 306 aaPredicted RBP28.43■■■□□ 2.14
PDE6B-203ENST00000460119 GPRC5DQ9NZD1 345 aa28.43■■■□□ 2.14
PDE6B-203ENST00000460119 CHL1O00533 1208 aa28.42■■■□□ 2.14
PDE6B-203ENST00000460119 HSPA8P11142 646 aaKnown RBP28.42■■■□□ 2.14
PDE6B-203ENST00000460119 GMPSP49915 693 aaPredicted RBP28.42■■■□□ 2.14
PDE6B-203ENST00000460119 RAD17O75943 681 aa28.41■■■□□ 2.14
PDE6B-203ENST00000460119 HSP90AB3PQ58FF7 597 aa28.41■■■□□ 2.14
PDE6B-203ENST00000460119 CYP4F22Q6NT55 531 aa28.41■■■□□ 2.14
PDE6B-203ENST00000460119 LMOD3Q0VAK6 560 aa28.4■■■□□ 2.14
PDE6B-203ENST00000460119 DDX46Q7L014 1031 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms