RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
GPNMB-204ENST00000459927 CRAMP1Q96RY5 1269 aa16.29■□□□□ 0.2
GPNMB-204ENST00000459927 ZBTB3Q9H5J0 574 aa16.29■□□□□ 0.2
GPNMB-204ENST00000459927 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
GPNMB-204ENST00000459927 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
GPNMB-204ENST00000459927 NUP98P52948 1817 aa16.27■□□□□ 0.2
GPNMB-204ENST00000459927 VEGFBP49765 207 aa16.27■□□□□ 0.2
GPNMB-204ENST00000459927 PDIA6Q15084 440 aa16.27■□□□□ 0.2
GPNMB-204ENST00000459927 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
GPNMB-204ENST00000459927 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
GPNMB-204ENST00000459927 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
GPNMB-204ENST00000459927 RIPK4P57078 832 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
GPNMB-204ENST00000459927 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
GPNMB-204ENST00000459927 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
GPNMB-204ENST00000459927 NTSR2O95665 410 aa16.25■□□□□ 0.19
GPNMB-204ENST00000459927 DEFB115Q30KQ5 88 aa16.25■□□□□ 0.19
GPNMB-204ENST00000459927 C3orf67Q6ZVT6 689 aa16.25■□□□□ 0.19
GPNMB-204ENST00000459927 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
GPNMB-204ENST00000459927 GJA3Q9Y6H8 435 aa16.25■□□□□ 0.19
GPNMB-204ENST00000459927 SNED1Q8TER0 1413 aa16.25■□□□□ 0.19
GPNMB-204ENST00000459927 FOXN1O15353 648 aa16.24■□□□□ 0.19
GPNMB-204ENST00000459927 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
GPNMB-204ENST00000459927 LARGE2Q8N3Y3 721 aa16.24■□□□□ 0.19
GPNMB-204ENST00000459927 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
GPNMB-204ENST00000459927 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
GPNMB-204ENST00000459927 EPS15P42566 896 aa16.23■□□□□ 0.19
GPNMB-204ENST00000459927 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
GPNMB-204ENST00000459927 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
GPNMB-204ENST00000459927 PRDM10Q9NQV6 1147 aa16.23■□□□□ 0.19
GPNMB-204ENST00000459927 WBP1LQ9NX94 342 aa16.23■□□□□ 0.19
GPNMB-204ENST00000459927 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
GPNMB-204ENST00000459927 PPEF1O14829 653 aaPredicted RBP16.22■□□□□ 0.19
GPNMB-204ENST00000459927 BBOX1O75936 387 aa16.22■□□□□ 0.19
GPNMB-204ENST00000459927 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
GPNMB-204ENST00000459927 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
GPNMB-204ENST00000459927 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
GPNMB-204ENST00000459927 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
GPNMB-204ENST00000459927 ANXA1P04083 346 aa16.21■□□□□ 0.19
GPNMB-204ENST00000459927 LMOD1P29536 600 aaPredicted RBP16.21■□□□□ 0.19
GPNMB-204ENST00000459927 TMPOP42166 694 aaKnown RBP16.21■□□□□ 0.19
GPNMB-204ENST00000459927 SCNN1DP51172 638 aa16.21■□□□□ 0.19
GPNMB-204ENST00000459927 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
GPNMB-204ENST00000459927 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
GPNMB-204ENST00000459927 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
GPNMB-204ENST00000459927 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
GPNMB-204ENST00000459927 RIC1Q4ADV7 1423 aa16.2■□□□□ 0.18
GPNMB-204ENST00000459927 CTCFP49711 727 aaPredicted RBP16.2■□□□□ 0.18
GPNMB-204ENST00000459927 USP50Q70EL3 339 aaPredicted RBP16.2■□□□□ 0.18
GPNMB-204ENST00000459927 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
GPNMB-204ENST00000459927 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
GPNMB-204ENST00000459927 AIMP1Q12904 312 aaKnown RBP16.19■□□□□ 0.18
GPNMB-204ENST00000459927 TCIRG1Q13488 830 aa16.19■□□□□ 0.18
GPNMB-204ENST00000459927 RALBP1Q15311 655 aa16.19■□□□□ 0.18
GPNMB-204ENST00000459927 NIM1KQ8IY84 436 aa16.19■□□□□ 0.18
GPNMB-204ENST00000459927 AIDAQ96BJ3 306 aa16.19■□□□□ 0.18
GPNMB-204ENST00000459927 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
GPNMB-204ENST00000459927 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
GPNMB-204ENST00000459927 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 ADAMTSL1Q8N6G6 1762 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 COL4A5P29400 1685 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 CHL1O00533 1208 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 CXCL9Q07325 125 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 AOC3Q16853 763 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 CST9Q5W186 159 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 XAGE3Q8WTP9 111 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
GPNMB-204ENST00000459927 ABT1Q9ULW3 272 aaKnown RBP16.18■□□□□ 0.18
GPNMB-204ENST00000459927 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
GPNMB-204ENST00000459927 LBX1P52954 281 aa16.17■□□□□ 0.18
GPNMB-204ENST00000459927 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
GPNMB-204ENST00000459927 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
GPNMB-204ENST00000459927 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
GPNMB-204ENST00000459927 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
GPNMB-204ENST00000459927 MPNDQ8N594 471 aa16.16■□□□□ 0.18
GPNMB-204ENST00000459927 GPRC5DQ9NZD1 345 aa16.16■□□□□ 0.18
GPNMB-204ENST00000459927 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
GPNMB-204ENST00000459927 ABCC4O15439 1325 aa16.16■□□□□ 0.18
GPNMB-204ENST00000459927 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
GPNMB-204ENST00000459927 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
GPNMB-204ENST00000459927 ADARB2Q9NS39 739 aaKnown RBP16.15■□□□□ 0.18
GPNMB-204ENST00000459927 PGAP2Q9UHJ9 254 aa16.15■□□□□ 0.18
GPNMB-204ENST00000459927 TRAF5O00463 557 aa16.14■□□□□ 0.17
GPNMB-204ENST00000459927 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
GPNMB-204ENST00000459927 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
GPNMB-204ENST00000459927 LTBP1Q14766 1721 aa16.14■□□□□ 0.17
GPNMB-204ENST00000459927 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
GPNMB-204ENST00000459927 CIAPIN1Q6FI81 312 aa16.13■□□□□ 0.17
GPNMB-204ENST00000459927 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms