RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 HOXA10P31260 410 aaPredicted RBP21.13■□□□□ 0.97
GPC1-206ENST00000455111 DPY19L2Q6NUT2 758 aa21.13■□□□□ 0.97
GPC1-206ENST00000455111 KIF6Q6ZMV9 814 aa21.13■□□□□ 0.97
GPC1-206ENST00000455111 DDX60Q8IY21 1712 aaKnown RBP21.12■□□□□ 0.97
GPC1-206ENST00000455111 SYNE4Q8N205 404 aa21.12■□□□□ 0.97
GPC1-206ENST00000455111 NECTIN2Q92692 538 aa21.12■□□□□ 0.97
GPC1-206ENST00000455111 L3MBTL3Q96JM7 780 aaPredicted RBP21.12■□□□□ 0.97
GPC1-206ENST00000455111 BABAM1Q9NWV8 329 aa21.12■□□□□ 0.97
GPC1-206ENST00000455111 ADAMTS8Q9UP79 889 aa21.12■□□□□ 0.97
GPC1-206ENST00000455111 CHL1O00533 1208 aa21.11■□□□□ 0.97
GPC1-206ENST00000455111 NEUROD2Q15784 382 aa21.11■□□□□ 0.97
GPC1-206ENST00000455111 NYXQ9GZU5 481 aa21.11■□□□□ 0.97
GPC1-206ENST00000455111 FZD9O00144 591 aa21.1■□□□□ 0.97
GPC1-206ENST00000455111 GTF2E1P29083 439 aaPredicted RBP21.1■□□□□ 0.97
GPC1-206ENST00000455111 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
GPC1-206ENST00000455111 IARSP41252 1262 aaKnown RBP21.09■□□□□ 0.97
GPC1-206ENST00000455111 CHADLQ6NUI6 762 aa21.08■□□□□ 0.97
GPC1-206ENST00000455111 COPS6Q7L5N1 327 aa21.08■□□□□ 0.97
GPC1-206ENST00000455111 RTKN2Q8IZC4 609 aa21.08■□□□□ 0.97
GPC1-206ENST00000455111 XAGE3Q8WTP9 111 aa21.08■□□□□ 0.97
GPC1-206ENST00000455111 RUNDC1Q96C34 613 aa21.08■□□□□ 0.97
GPC1-206ENST00000455111 TAF1DQ9H5J8 278 aaPredicted RBP21.08■□□□□ 0.97
GPC1-206ENST00000455111 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
GPC1-206ENST00000455111 PSMD1Q99460 953 aa21.07■□□□□ 0.96
GPC1-206ENST00000455111 PRKRIP1Q9H875 184 aaPredicted RBP21.07■□□□□ 0.96
GPC1-206ENST00000455111 ZNF428Q96B54 188 aa21.06■□□□□ 0.96
GPC1-206ENST00000455111 CRAMP1Q96RY5 1269 aa21.06■□□□□ 0.96
GPC1-206ENST00000455111 PASKQ96RG2 1323 aa21.05■□□□□ 0.96
GPC1-206ENST00000455111 LMOD3Q0VAK6 560 aa21.05■□□□□ 0.96
GPC1-206ENST00000455111 AIMP1Q12904 312 aaKnown RBP21.05■□□□□ 0.96
GPC1-206ENST00000455111 NLRP10Q86W26 655 aa21.05■□□□□ 0.96
GPC1-206ENST00000455111 DUOX1Q9NRD9 1551 aa21.05■□□□□ 0.96
GPC1-206ENST00000455111 ABCC4O15439 1325 aa21.04■□□□□ 0.96
GPC1-206ENST00000455111 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
GPC1-206ENST00000455111 LRRC37AA6NMS7 1700 aa21.04■□□□□ 0.96
GPC1-206ENST00000455111 TCERG1O14776 1098 aaKnown RBP21.04■□□□□ 0.96
GPC1-206ENST00000455111 ITGBL1O95965 494 aaPredicted RBP21.04■□□□□ 0.96
GPC1-206ENST00000455111 PARP10Q53GL7 1025 aa21.04■□□□□ 0.96
GPC1-206ENST00000455111 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
GPC1-206ENST00000455111 DDX21Q9NR30 783 aaKnown RBP eCLIP21.04■□□□□ 0.96
GPC1-206ENST00000455111 CHPF2Q9P2E5 772 aa21.04■□□□□ 0.96
GPC1-206ENST00000455111 PPEF1O14829 653 aaPredicted RBP21.03■□□□□ 0.96
GPC1-206ENST00000455111 COL13A1Q5TAT6 717 aaPredicted RBP21.03■□□□□ 0.96
GPC1-206ENST00000455111 PPP1R42Q7Z4L9 355 aa21.03■□□□□ 0.96
GPC1-206ENST00000455111 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
GPC1-206ENST00000455111 LAS1LQ9Y4W2 734 aaKnown RBP21.03■□□□□ 0.96
GPC1-206ENST00000455111 ZNF853P0CG23 659 aa21.02■□□□□ 0.96
GPC1-206ENST00000455111 TCIRG1Q13488 830 aa21.02■□□□□ 0.96
GPC1-206ENST00000455111 HCLS1P14317 486 aaPredicted RBP21.01■□□□□ 0.95
GPC1-206ENST00000455111 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
GPC1-206ENST00000455111 RBM17Q96I25 401 aaKnown RBP21.01■□□□□ 0.95
GPC1-206ENST00000455111 IQCA1LA6NCM1 817 aa21■□□□□ 0.95
GPC1-206ENST00000455111 CC2D2BQ6DHV5 1058 aa21■□□□□ 0.95
GPC1-206ENST00000455111 LDHDQ86WU2 507 aa21■□□□□ 0.95
GPC1-206ENST00000455111 MBIPQ9NS73 344 aa21■□□□□ 0.95
GPC1-206ENST00000455111 EPHX2P34913 555 aa20.99■□□□□ 0.95
GPC1-206ENST00000455111 SCNN1DP51172 638 aa20.99■□□□□ 0.95
GPC1-206ENST00000455111 WDR43Q15061 677 aaKnown RBP eCLIP20.99■□□□□ 0.95
GPC1-206ENST00000455111 GPC2Q8N158 579 aa20.99■□□□□ 0.95
GPC1-206ENST00000455111 NLRP3Q96P20 1036 aa20.99■□□□□ 0.95
GPC1-206ENST00000455111 HACL1Q9UJ83 578 aa20.99■□□□□ 0.95
GPC1-206ENST00000455111 ATP6V0A2Q9Y487 856 aa20.99■□□□□ 0.95
GPC1-206ENST00000455111 HDGFL1Q5TGJ6 251 aa20.98■□□□□ 0.95
GPC1-206ENST00000455111 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
GPC1-206ENST00000455111 ISCA1Q9BUE6 129 aa20.98■□□□□ 0.95
GPC1-206ENST00000455111 CREBZFQ9NS37 354 aa20.98■□□□□ 0.95
GPC1-206ENST00000455111 APAF1O14727 1248 aa20.97■□□□□ 0.95
GPC1-206ENST00000455111 EAPPQ56P03 285 aaPredicted RBP20.97■□□□□ 0.95
GPC1-206ENST00000455111 MKRN1Q9UHC7 482 aaKnown RBP20.97■□□□□ 0.95
GPC1-206ENST00000455111 HSPA1AP0DMV8 641 aaKnown RBP20.96■□□□□ 0.95
GPC1-206ENST00000455111 HSPA1BP0DMV9 641 aaKnown RBP20.96■□□□□ 0.95
GPC1-206ENST00000455111 FMR1Q06787 632 aaKnown RBP eCLIP20.96■□□□□ 0.95
GPC1-206ENST00000455111 AOC3Q16853 763 aa20.96■□□□□ 0.95
GPC1-206ENST00000455111 DUSP27Q5VZP5 1158 aa20.96■□□□□ 0.95
GPC1-206ENST00000455111 MAP1SQ66K74 1059 aaPredicted RBP20.96■□□□□ 0.95
GPC1-206ENST00000455111 RTFDC1Q9BY42 306 aaPredicted RBP20.96■□□□□ 0.95
GPC1-206ENST00000455111 HOXB7P09629 217 aa20.95■□□□□ 0.94
GPC1-206ENST00000455111 EPS15P42566 896 aa20.95■□□□□ 0.94
GPC1-206ENST00000455111 HSP90AB3PQ58FF7 597 aa20.95■□□□□ 0.94
GPC1-206ENST00000455111 LARGE2Q8N3Y3 721 aa20.95■□□□□ 0.94
GPC1-206ENST00000455111 PLBD2Q8NHP8 589 aa20.95■□□□□ 0.94
GPC1-206ENST00000455111 TRMT112Q9UI30 125 aaKnown RBP20.95■□□□□ 0.94
GPC1-206ENST00000455111 GJA3Q9Y6H8 435 aa20.95■□□□□ 0.94
GPC1-206ENST00000455111 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
GPC1-206ENST00000455111 JDP2Q8WYK2 163 aa20.94■□□□□ 0.94
GPC1-206ENST00000455111 SH3TC1Q8TE82 1336 aa20.94■□□□□ 0.94
GPC1-206ENST00000455111 CNTNAP1P78357 1384 aa20.94■□□□□ 0.94
GPC1-206ENST00000455111 ANKRD13DQ6ZTN6 518 aa20.93■□□□□ 0.94
GPC1-206ENST00000455111 SP8Q8IXZ3 490 aa20.93■□□□□ 0.94
GPC1-206ENST00000455111 PHAXQ9H814 394 aaKnown RBP20.93■□□□□ 0.94
GPC1-206ENST00000455111 PPIP5K2O43314 1243 aa20.92■□□□□ 0.94
GPC1-206ENST00000455111 C8orf58Q8NAV2 365 aa20.92■□□□□ 0.94
GPC1-206ENST00000455111 FAM89AQ96GI7 184 aa20.92■□□□□ 0.94
GPC1-206ENST00000455111 DBF4Q9UBU7 674 aaPredicted RBP20.92■□□□□ 0.94
GPC1-206ENST00000455111 EIF6P56537 245 aaKnown RBP20.91■□□□□ 0.94
GPC1-206ENST00000455111 CXCL9Q07325 125 aa20.91■□□□□ 0.94
GPC1-206ENST00000455111 GRAPQ13588 217 aa20.91■□□□□ 0.94
GPC1-206ENST00000455111 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
GPC1-206ENST00000455111 CNTROBQ8N137 903 aa20.91■□□□□ 0.94
GPC1-206ENST00000455111 GRAPLQ8TC17 118 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms