RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TSPYL4Q9UJ04 414 aa15.4■□□□□ 0.06
GARNL3-210ENST00000453030 SUSD4Q5VX71 490 aa15.39■□□□□ 0.05
GARNL3-210ENST00000453030 HACL1Q9UJ83 578 aa15.39■□□□□ 0.05
GARNL3-210ENST00000453030 TAF1P21675 1872 aa15.39■□□□□ 0.05
GARNL3-210ENST00000453030 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
GARNL3-210ENST00000453030 NTSR2O95665 410 aa15.38■□□□□ 0.05
GARNL3-210ENST00000453030 EPHX2P34913 555 aa15.38■□□□□ 0.05
GARNL3-210ENST00000453030 PNNQ9H307 717 aaKnown RBP15.38■□□□□ 0.05
GARNL3-210ENST00000453030 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
GARNL3-210ENST00000453030 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
GARNL3-210ENST00000453030 PASKQ96RG2 1323 aa15.38■□□□□ 0.05
GARNL3-210ENST00000453030 FZD9O00144 591 aa15.37■□□□□ 0.05
GARNL3-210ENST00000453030 ANXA1P04083 346 aa15.37■□□□□ 0.05
GARNL3-210ENST00000453030 EIF2S2P20042 333 aaKnown RBP15.37■□□□□ 0.05
GARNL3-210ENST00000453030 C3orf67Q6ZVT6 689 aa15.37■□□□□ 0.05
GARNL3-210ENST00000453030 PSMD1Q99460 953 aa15.37■□□□□ 0.05
GARNL3-210ENST00000453030 TRPM7Q96QT4 1865 aa15.37■□□□□ 0.05
GARNL3-210ENST00000453030 CNTNAP1P78357 1384 aa15.36■□□□□ 0.05
GARNL3-210ENST00000453030 PPEF1O14829 653 aaPredicted RBP15.36■□□□□ 0.05
GARNL3-210ENST00000453030 RIPK4P57078 832 aa15.36■□□□□ 0.05
GARNL3-210ENST00000453030 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
GARNL3-210ENST00000453030 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
GARNL3-210ENST00000453030 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
GARNL3-210ENST00000453030 JDP2Q8WYK2 163 aa15.36■□□□□ 0.05
GARNL3-210ENST00000453030 GJA3Q9Y6H8 435 aa15.36■□□□□ 0.05
GARNL3-210ENST00000453030 DDX60Q8IY21 1712 aaKnown RBP15.35■□□□□ 0.05
GARNL3-210ENST00000453030 HOXA10P31260 410 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-210ENST00000453030 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-210ENST00000453030 GPC2Q8N158 579 aa15.35■□□□□ 0.05
GARNL3-210ENST00000453030 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
GARNL3-210ENST00000453030 RBM17Q96I25 401 aaKnown RBP15.35■□□□□ 0.05
GARNL3-210ENST00000453030 EIF6P56537 245 aaKnown RBP15.34■□□□□ 0.05
GARNL3-210ENST00000453030 CC2D2BQ6DHV5 1058 aa15.34■□□□□ 0.05
GARNL3-210ENST00000453030 LRP10Q7Z4F1 713 aa15.34■□□□□ 0.05
GARNL3-210ENST00000453030 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
GARNL3-210ENST00000453030 LARGE2Q8N3Y3 721 aa15.34■□□□□ 0.05
GARNL3-210ENST00000453030 TMEM88BA6NKF7 163 aa15.33■□□□□ 0.04
GARNL3-210ENST00000453030 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
GARNL3-210ENST00000453030 TMPOP42166 694 aaKnown RBP15.33■□□□□ 0.04
GARNL3-210ENST00000453030 PDIA6Q15084 440 aa15.33■□□□□ 0.04
GARNL3-210ENST00000453030 PARP10Q53GL7 1025 aa15.33■□□□□ 0.04
GARNL3-210ENST00000453030 PNMA8AQ86V59 439 aaPredicted RBP15.33■□□□□ 0.04
GARNL3-210ENST00000453030 CRAMP1Q96RY5 1269 aa15.33■□□□□ 0.04
GARNL3-210ENST00000453030 LMOD1P29536 600 aaPredicted RBP15.32■□□□□ 0.04
GARNL3-210ENST00000453030 LMOD3Q0VAK6 560 aa15.32■□□□□ 0.04
GARNL3-210ENST00000453030 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
GARNL3-210ENST00000453030 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
GARNL3-210ENST00000453030 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
GARNL3-210ENST00000453030 ABCC4O15439 1325 aa15.32■□□□□ 0.04
GARNL3-210ENST00000453030 LRRC37AA6NMS7 1700 aa15.31■□□□□ 0.04
GARNL3-210ENST00000453030 PPIP5K2O43314 1243 aa15.31■□□□□ 0.04
GARNL3-210ENST00000453030 AIMP1Q12904 312 aaKnown RBP15.31■□□□□ 0.04
GARNL3-210ENST00000453030 RALBP1Q15311 655 aa15.31■□□□□ 0.04
GARNL3-210ENST00000453030 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
GARNL3-210ENST00000453030 NIM1KQ8IY84 436 aa15.31■□□□□ 0.04
GARNL3-210ENST00000453030 CNTROBQ8N137 903 aa15.31■□□□□ 0.04
GARNL3-210ENST00000453030 FOXN1O15353 648 aa15.3■□□□□ 0.04
GARNL3-210ENST00000453030 VEGFBP49765 207 aa15.3■□□□□ 0.04
GARNL3-210ENST00000453030 SCNN1DP51172 638 aa15.3■□□□□ 0.04
GARNL3-210ENST00000453030 AOC3Q16853 763 aa15.3■□□□□ 0.04
GARNL3-210ENST00000453030 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
GARNL3-210ENST00000453030 XAGE3Q8WTP9 111 aa15.3■□□□□ 0.04
GARNL3-210ENST00000453030 ZNF428Q96B54 188 aa15.3■□□□□ 0.04
GARNL3-210ENST00000453030 TMX4Q9H1E5 349 aaPredicted RBP15.3■□□□□ 0.04
GARNL3-210ENST00000453030 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
GARNL3-210ENST00000453030 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
GARNL3-210ENST00000453030 EPS15P42566 896 aa15.29■□□□□ 0.04
GARNL3-210ENST00000453030 GRIPAP1Q4V328 841 aa15.29■□□□□ 0.04
GARNL3-210ENST00000453030 COPS6Q7L5N1 327 aa15.29■□□□□ 0.04
GARNL3-210ENST00000453030 BABAM1Q9NWV8 329 aa15.29■□□□□ 0.04
GARNL3-210ENST00000453030 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
GARNL3-210ENST00000453030 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
GARNL3-210ENST00000453030 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
GARNL3-210ENST00000453030 HSP90AB3PQ58FF7 597 aa15.28■□□□□ 0.04
GARNL3-210ENST00000453030 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
GARNL3-210ENST00000453030 AIDAQ96BJ3 306 aa15.28■□□□□ 0.04
GARNL3-210ENST00000453030 ABT1Q9ULW3 272 aaKnown RBP15.28■□□□□ 0.04
GARNL3-210ENST00000453030 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
GARNL3-210ENST00000453030 FMR1Q06787 632 aaKnown RBP eCLIP15.27■□□□□ 0.04
GARNL3-210ENST00000453030 DDX10Q13206 875 aaKnown RBP15.27■□□□□ 0.04
GARNL3-210ENST00000453030 CHPF2Q9P2E5 772 aa15.27■□□□□ 0.04
GARNL3-210ENST00000453030 SH3TC1Q8TE82 1336 aa15.26■□□□□ 0.03
GARNL3-210ENST00000453030 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
GARNL3-210ENST00000453030 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
GARNL3-210ENST00000453030 SLC10A5Q5PT55 438 aa15.26■□□□□ 0.03
GARNL3-210ENST00000453030 DPP8Q6V1X1 898 aaPredicted RBP15.26■□□□□ 0.03
GARNL3-210ENST00000453030 DDX21Q9NR30 783 aaKnown RBP eCLIP15.26■□□□□ 0.03
GARNL3-210ENST00000453030 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
GARNL3-210ENST00000453030 COL4A1P02462 1669 aa15.25■□□□□ 0.03
GARNL3-210ENST00000453030 TCIRG1Q13488 830 aa15.25■□□□□ 0.03
GARNL3-210ENST00000453030 DEFB115Q30KQ5 88 aa15.25■□□□□ 0.03
GARNL3-210ENST00000453030 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
GARNL3-210ENST00000453030 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
GARNL3-210ENST00000453030 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
GARNL3-210ENST00000453030 TRAF5O00463 557 aa15.24■□□□□ 0.03
GARNL3-210ENST00000453030 CHL1O00533 1208 aa15.24■□□□□ 0.03
GARNL3-210ENST00000453030 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-210ENST00000453030 GRM1Q13255 1194 aa15.24■□□□□ 0.03
GARNL3-210ENST00000453030 USP50Q70EL3 339 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-210ENST00000453030 DDX46Q7L014 1031 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms