RNA–Protein interactions for RNA: ENST00000451285.1

LINC02543-201, Transcript of long intergenic non-protein coding RNA 2543, humanhuman

TSL 1 (best) BASIC

Gene LINC02543, Length 845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02543-201ENST00000451285 ADAMTS8Q9UP79 889 aa12.1□□□□□ -0.47
LINC02543-201ENST00000451285 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
LINC02543-201ENST00000451285 ADAMTSL1Q8N6G6 1762 aa12.1□□□□□ -0.47
LINC02543-201ENST00000451285 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
LINC02543-201ENST00000451285 IBTKQ9P2D0 1353 aaPredicted RBP12.09□□□□□ -0.47
LINC02543-201ENST00000451285 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
LINC02543-201ENST00000451285 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
LINC02543-201ENST00000451285 RTKN2Q8IZC4 609 aa12.09□□□□□ -0.47
LINC02543-201ENST00000451285 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
LINC02543-201ENST00000451285 ZNF541Q9H0D2 1346 aa12.09□□□□□ -0.47
LINC02543-201ENST00000451285 ITGBL1O95965 494 aaPredicted RBP12.08□□□□□ -0.48
LINC02543-201ENST00000451285 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
LINC02543-201ENST00000451285 CRAMP1Q96RY5 1269 aa12.08□□□□□ -0.48
LINC02543-201ENST00000451285 PSMD1Q99460 953 aa12.08□□□□□ -0.48
LINC02543-201ENST00000451285 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
LINC02543-201ENST00000451285 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
LINC02543-201ENST00000451285 IARSP41252 1262 aaKnown RBP12.07□□□□□ -0.48
LINC02543-201ENST00000451285 LTBP1Q14766 1721 aa12.07□□□□□ -0.48
LINC02543-201ENST00000451285 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
LINC02543-201ENST00000451285 CHADLQ6NUI6 762 aa12.07□□□□□ -0.48
LINC02543-201ENST00000451285 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
LINC02543-201ENST00000451285 RUNDC1Q96C34 613 aa12.07□□□□□ -0.48
LINC02543-201ENST00000451285 PRKRIP1Q9H875 184 aaPredicted RBP12.07□□□□□ -0.48
LINC02543-201ENST00000451285 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
LINC02543-201ENST00000451285 ZNF853P0CG23 659 aa12.06□□□□□ -0.48
LINC02543-201ENST00000451285 NECTIN2Q92692 538 aa12.06□□□□□ -0.48
LINC02543-201ENST00000451285 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC02543-201ENST00000451285 TCIRG1Q13488 830 aa12.05□□□□□ -0.48
LINC02543-201ENST00000451285 PARP10Q53GL7 1025 aa12.05□□□□□ -0.48
LINC02543-201ENST00000451285 CC2D2BQ6DHV5 1058 aa12.05□□□□□ -0.48
LINC02543-201ENST00000451285 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
LINC02543-201ENST00000451285 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
LINC02543-201ENST00000451285 XAGE3Q8WTP9 111 aa12.05□□□□□ -0.48
LINC02543-201ENST00000451285 DDX60Q8IY21 1712 aaKnown RBP12.04□□□□□ -0.48
LINC02543-201ENST00000451285 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
LINC02543-201ENST00000451285 COL13A1Q5TAT6 717 aaPredicted RBP12.04□□□□□ -0.48
LINC02543-201ENST00000451285 UTP14AQ9BVJ6 771 aaKnown RBP12.04□□□□□ -0.48
LINC02543-201ENST00000451285 COL4A1P02462 1669 aa12.03□□□□□ -0.48
LINC02543-201ENST00000451285 AIMP1Q12904 312 aaKnown RBP12.03□□□□□ -0.48
LINC02543-201ENST00000451285 LDHDQ86WU2 507 aa12.03□□□□□ -0.48
LINC02543-201ENST00000451285 RBM17Q96I25 401 aaKnown RBP12.03□□□□□ -0.48
LINC02543-201ENST00000451285 CFAP44Q96MT7 982 aa12.03□□□□□ -0.48
LINC02543-201ENST00000451285 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
LINC02543-201ENST00000451285 ISCA1Q9BUE6 129 aa12.03□□□□□ -0.48
LINC02543-201ENST00000451285 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
LINC02543-201ENST00000451285 IQCA1LA6NCM1 817 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
LINC02543-201ENST00000451285 HCLS1P14317 486 aaPredicted RBP12.02□□□□□ -0.49
LINC02543-201ENST00000451285 CCDC184Q52MB2 194 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 GPC2Q8N158 579 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 RPGRQ92834 1020 aaKnown RBP12.02□□□□□ -0.49
LINC02543-201ENST00000451285 RTFDC1Q9BY42 306 aaPredicted RBP12.02□□□□□ -0.49
LINC02543-201ENST00000451285 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 HACL1Q9UJ83 578 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 ABCC4O15439 1325 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
LINC02543-201ENST00000451285 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
LINC02543-201ENST00000451285 HOXB7P09629 217 aa12.01□□□□□ -0.49
LINC02543-201ENST00000451285 EPHX2P34913 555 aa12.01□□□□□ -0.49
LINC02543-201ENST00000451285 SCNN1DP51172 638 aa12.01□□□□□ -0.49
LINC02543-201ENST00000451285 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
LINC02543-201ENST00000451285 SP8Q8IXZ3 490 aa12.01□□□□□ -0.49
LINC02543-201ENST00000451285 MBIPQ9NS73 344 aa12.01□□□□□ -0.49
LINC02543-201ENST00000451285 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
LINC02543-201ENST00000451285 APAF1O14727 1248 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 BBOX1O75936 387 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 EPS15P42566 896 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 HSP90AB3PQ58FF7 597 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 DUSP27Q5VZP5 1158 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 PLBD2Q8NHP8 589 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 ZNF428Q96B54 188 aa12□□□□□ -0.49
LINC02543-201ENST00000451285 FMR1Q06787 632 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC02543-201ENST00000451285 CXCL9Q07325 125 aa11.99□□□□□ -0.49
LINC02543-201ENST00000451285 TRIM28Q13263 835 aaKnown RBP11.99□□□□□ -0.49
LINC02543-201ENST00000451285 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC02543-201ENST00000451285 MAP1SQ66K74 1059 aaPredicted RBP11.99□□□□□ -0.49
LINC02543-201ENST00000451285 JDP2Q8WYK2 163 aa11.99□□□□□ -0.49
LINC02543-201ENST00000451285 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
LINC02543-201ENST00000451285 TRMT112Q9UI30 125 aaKnown RBP11.99□□□□□ -0.49
LINC02543-201ENST00000451285 DUOX1Q9NRD9 1551 aa11.99□□□□□ -0.49
LINC02543-201ENST00000451285 LRRC37AA6NMS7 1700 aa11.99□□□□□ -0.49
LINC02543-201ENST00000451285 POLR2AP24928 1970 aaKnown RBP11.98□□□□□ -0.49
LINC02543-201ENST00000451285 CNTNAP1P78357 1384 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 SH3TC1Q8TE82 1336 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 HSPA1AP0DMV8 641 aaKnown RBP11.98□□□□□ -0.49
LINC02543-201ENST00000451285 HSPA1BP0DMV9 641 aaKnown RBP11.98□□□□□ -0.49
LINC02543-201ENST00000451285 SF3B3Q15393 1217 aaKnown RBP11.98□□□□□ -0.49
LINC02543-201ENST00000451285 AOC3Q16853 763 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 EAPPQ56P03 285 aaPredicted RBP11.98□□□□□ -0.49
LINC02543-201ENST00000451285 HDGFL1Q5TGJ6 251 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 CNTROBQ8N137 903 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 LARGE2Q8N3Y3 721 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 C8orf58Q8NAV2 365 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 FAM89AQ96GI7 184 aa11.98□□□□□ -0.49
LINC02543-201ENST00000451285 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
LINC02543-201ENST00000451285 DBF4Q9UBU7 674 aaPredicted RBP11.98□□□□□ -0.49
LINC02543-201ENST00000451285 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms