RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 HSPA6P17066 643 aa13.58□□□□□ -0.24
SMPD4-211ENST00000449159 HSP90AB3PQ58FF7 597 aa13.58□□□□□ -0.24
SMPD4-211ENST00000449159 NLRP10Q86W26 655 aa13.58□□□□□ -0.24
SMPD4-211ENST00000449159 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-211ENST00000449159 CNBD1Q8NA66 436 aa13.58□□□□□ -0.24
SMPD4-211ENST00000449159 MYD88Q99836 296 aa13.58□□□□□ -0.24
SMPD4-211ENST00000449159 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
SMPD4-211ENST00000449159 ABCC12Q96J65 1359 aa13.58□□□□□ -0.24
SMPD4-211ENST00000449159 CACNA1SQ13698 1873 aa13.57□□□□□ -0.24
SMPD4-211ENST00000449159 BCAR3O75815 825 aa13.57□□□□□ -0.24
SMPD4-211ENST00000449159 SUSD4Q5VX71 490 aa13.57□□□□□ -0.24
SMPD4-211ENST00000449159 NUTM1Q86Y26 1132 aa13.57□□□□□ -0.24
SMPD4-211ENST00000449159 METTL22Q9BUU2 404 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-211ENST00000449159 IBTKQ9P2D0 1353 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-211ENST00000449159 NTSR2O95665 410 aa13.56□□□□□ -0.24
SMPD4-211ENST00000449159 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
SMPD4-211ENST00000449159 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
SMPD4-211ENST00000449159 TIAM2Q8IVF5 1701 aa13.56□□□□□ -0.24
SMPD4-211ENST00000449159 NPHP1O15259 732 aa13.55□□□□□ -0.24
SMPD4-211ENST00000449159 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
SMPD4-211ENST00000449159 ERFEQ4G0M1 354 aa13.55□□□□□ -0.24
SMPD4-211ENST00000449159 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
SMPD4-211ENST00000449159 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
SMPD4-211ENST00000449159 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
SMPD4-211ENST00000449159 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-211ENST00000449159 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
SMPD4-211ENST00000449159 UTP14AQ9BVJ6 771 aaKnown RBP13.54□□□□□ -0.24
SMPD4-211ENST00000449159 NYXQ9GZU5 481 aa13.54□□□□□ -0.24
SMPD4-211ENST00000449159 PTPRCP08575 1304 aa13.54□□□□□ -0.24
SMPD4-211ENST00000449159 SBF1O95248 1867 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 MYH3P11055 1940 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-211ENST00000449159 CHRNA5P30532 468 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-211ENST00000449159 ST5P78524 1137 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 TRIM28Q13263 835 aaKnown RBP13.53□□□□□ -0.24
SMPD4-211ENST00000449159 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
SMPD4-211ENST00000449159 TAF1P21675 1872 aa13.53□□□□□ -0.24
SMPD4-211ENST00000449159 A0A0G2JLW4 131 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 KIF3CO14782 793 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 DPEP1P16444 411 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 BEND3Q5T5X7 828 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 C3orf67Q6ZVT6 689 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 CCDC191Q8NCU4 936 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
SMPD4-211ENST00000449159 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
SMPD4-211ENST00000449159 TNNQ9UQP3 1299 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 KIF16BQ96L93 1317 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 RIC1Q4ADV7 1423 aa13.52□□□□□ -0.25
SMPD4-211ENST00000449159 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
SMPD4-211ENST00000449159 HCLS1P14317 486 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-211ENST00000449159 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
SMPD4-211ENST00000449159 LINS1Q8NG48 757 aa13.51□□□□□ -0.25
SMPD4-211ENST00000449159 FRAT1Q92837 279 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-211ENST00000449159 RNF123Q5XPI4 1314 aa13.5□□□□□ -0.25
SMPD4-211ENST00000449159 KCNA3P22001 575 aa13.5□□□□□ -0.25
SMPD4-211ENST00000449159 TGFB2P61812 414 aa13.5□□□□□ -0.25
SMPD4-211ENST00000449159 GCKRQ14397 625 aa13.5□□□□□ -0.25
SMPD4-211ENST00000449159 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
SMPD4-211ENST00000449159 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
SMPD4-211ENST00000449159 SLX4Q8IY92 1834 aa13.49□□□□□ -0.25
SMPD4-211ENST00000449159 TRIM27P14373 513 aa13.49□□□□□ -0.25
SMPD4-211ENST00000449159 PDE6BP35913 854 aa13.49□□□□□ -0.25
SMPD4-211ENST00000449159 SLC10A5Q5PT55 438 aa13.49□□□□□ -0.25
SMPD4-211ENST00000449159 ZBTB38Q8NAP3 1195 aaPredicted RBP13.49□□□□□ -0.25
SMPD4-211ENST00000449159 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
SMPD4-211ENST00000449159 COL4A1P02462 1669 aa13.49□□□□□ -0.25
SMPD4-211ENST00000449159 ABCC4O15439 1325 aa13.48□□□□□ -0.25
SMPD4-211ENST00000449159 KLRG2A4D1S0 409 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-211ENST00000449159 H0YIN7 160 aa13.48□□□□□ -0.25
SMPD4-211ENST00000449159 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-211ENST00000449159 APLP1P51693 650 aa13.48□□□□□ -0.25
SMPD4-211ENST00000449159 UBE3BQ7Z3V4 1068 aa13.48□□□□□ -0.25
SMPD4-211ENST00000449159 ARHGAP45Q92619 1136 aa13.48□□□□□ -0.25
SMPD4-211ENST00000449159 API5Q9BZZ5 524 aaKnown RBP13.48□□□□□ -0.25
SMPD4-211ENST00000449159 SPEF2Q9C093 1822 aa13.48□□□□□ -0.25
SMPD4-211ENST00000449159 CCDC88AQ3V6T2 1871 aa13.47□□□□□ -0.25
SMPD4-211ENST00000449159 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-211ENST00000449159 SRGNP10124 158 aa13.47□□□□□ -0.25
SMPD4-211ENST00000449159 CASP7P55210 303 aa13.47□□□□□ -0.25
SMPD4-211ENST00000449159 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
SMPD4-211ENST00000449159 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
SMPD4-211ENST00000449159 ATF7IPQ6VMQ6 1270 aa13.47□□□□□ -0.25
SMPD4-211ENST00000449159 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
SMPD4-211ENST00000449159 CDHR2Q9BYE9 1310 aa13.46□□□□□ -0.25
SMPD4-211ENST00000449159 H7C1W4 665 aa13.46□□□□□ -0.25
SMPD4-211ENST00000449159 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
SMPD4-211ENST00000449159 ALDH1L1O75891 902 aa13.46□□□□□ -0.25
SMPD4-211ENST00000449159 TOMM70O94826 608 aa13.46□□□□□ -0.25
SMPD4-211ENST00000449159 ZNF622Q969S3 477 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMPD4-211ENST00000449159 PCNTO95613 3336 aa13.46□□□□□ -0.26
SMPD4-211ENST00000449159 RLBP1P12271 317 aa13.45□□□□□ -0.26
SMPD4-211ENST00000449159 NPR1P16066 1061 aa13.45□□□□□ -0.26
SMPD4-211ENST00000449159 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms