RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 HCSTQ9UBK5 93 aa9.5□□□□□ -0.89
COL11A1-205ENST00000447608 FOXD3Q9UJU5 478 aaPredicted RBP9.5□□□□□ -0.89
COL11A1-205ENST00000447608 IRS1P35568 1242 aa9.49□□□□□ -0.89
COL11A1-205ENST00000447608 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
COL11A1-205ENST00000447608 CCDC74AQ96AQ1 378 aa9.49□□□□□ -0.89
COL11A1-205ENST00000447608 AIDAQ96BJ3 306 aa9.49□□□□□ -0.89
COL11A1-205ENST00000447608 GRIP2Q9C0E4 1043 aa9.49□□□□□ -0.89
COL11A1-205ENST00000447608 C12orf49Q9H741 205 aa9.49□□□□□ -0.89
COL11A1-205ENST00000447608 SRA1Q9HD15 236 aaKnown RBP9.49□□□□□ -0.89
COL11A1-205ENST00000447608 USP20Q9Y2K6 914 aa9.49□□□□□ -0.89
COL11A1-205ENST00000447608 TGFBR3LH3BV60 316 aa9.48□□□□□ -0.89
COL11A1-205ENST00000447608 TNFRSF21O75509 655 aa9.48□□□□□ -0.89
COL11A1-205ENST00000447608 ARID5AQ03989 594 aa9.48□□□□□ -0.89
COL11A1-205ENST00000447608 PTPN12Q05209 780 aaKnown RBP9.48□□□□□ -0.89
COL11A1-205ENST00000447608 C4orf17Q53FE4 359 aa9.48□□□□□ -0.89
COL11A1-205ENST00000447608 GNASQ5JWF2 1037 aa9.48□□□□□ -0.89
COL11A1-205ENST00000447608 SLC27A3Q5K4L6 730 aa9.48□□□□□ -0.89
COL11A1-205ENST00000447608 SUSD3Q96L08 255 aa9.48□□□□□ -0.89
COL11A1-205ENST00000447608 DMGDHQ9UI17 866 aaKnown RBP9.48□□□□□ -0.89
COL11A1-205ENST00000447608 IDH3AP50213 366 aa9.47□□□□□ -0.89
COL11A1-205ENST00000447608 WDR4P57081 412 aaKnown RBP9.47□□□□□ -0.89
COL11A1-205ENST00000447608 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
COL11A1-205ENST00000447608 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
COL11A1-205ENST00000447608 GGT7Q9UJ14 662 aa9.47□□□□□ -0.89
COL11A1-205ENST00000447608 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
COL11A1-205ENST00000447608 FOXC1Q12948 553 aa9.46□□□□□ -0.9
COL11A1-205ENST00000447608 HIF1AQ16665 826 aa9.46□□□□□ -0.9
COL11A1-205ENST00000447608 CCDC144BQ3MJ40 725 aa9.46□□□□□ -0.9
COL11A1-205ENST00000447608 ARMC5Q96C12 935 aa9.46□□□□□ -0.9
COL11A1-205ENST00000447608 HSH2DQ96JZ2 352 aa9.46□□□□□ -0.9
COL11A1-205ENST00000447608 ZFYVE28Q9HCC9 887 aa9.46□□□□□ -0.9
COL11A1-205ENST00000447608 GIPC1O14908 333 aa9.45□□□□□ -0.9
COL11A1-205ENST00000447608 PHKA2P46019 1235 aa9.45□□□□□ -0.9
COL11A1-205ENST00000447608 NBPF1Q3BBV0 1214 aa9.45□□□□□ -0.9
COL11A1-205ENST00000447608 XKR5Q6UX68 686 aa9.45□□□□□ -0.9
COL11A1-205ENST00000447608 ZNF438Q7Z4V0 828 aa9.45□□□□□ -0.9
COL11A1-205ENST00000447608 NOP9Q86U38 636 aaKnown RBP9.45□□□□□ -0.9
COL11A1-205ENST00000447608 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
COL11A1-205ENST00000447608 PMFBP1Q8TBY8 1022 aa9.45□□□□□ -0.9
COL11A1-205ENST00000447608 PPM1GO15355 546 aaPredicted RBP9.44□□□□□ -0.9
COL11A1-205ENST00000447608 TIMP2P16035 220 aa9.44□□□□□ -0.9
COL11A1-205ENST00000447608 TAF1CQ15572 869 aaPredicted RBP9.44□□□□□ -0.9
COL11A1-205ENST00000447608 SPRYD7Q5W111 196 aa9.44□□□□□ -0.9
COL11A1-205ENST00000447608 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
COL11A1-205ENST00000447608 SNIP1Q8TAD8 396 aaKnown RBP9.44□□□□□ -0.9
COL11A1-205ENST00000447608 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
COL11A1-205ENST00000447608 FNDC3AQ9Y2H6 1198 aaKnown RBP9.44□□□□□ -0.9
COL11A1-205ENST00000447608 USP17L7P0C7H9 530 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 INPP5BP32019 993 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 GPC1P35052 558 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 RBL2Q08999 1139 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 TRIP4Q15650 581 aaPredicted RBP9.43□□□□□ -0.9
COL11A1-205ENST00000447608 IER5Q5VY09 327 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 INSM2Q96T92 566 aaPredicted RBP9.43□□□□□ -0.9
COL11A1-205ENST00000447608 ZDHHC3Q9NYG2 299 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 FAM8A1Q9UBU6 413 aa9.43□□□□□ -0.9
COL11A1-205ENST00000447608 RTCBQ9Y3I0 505 aaKnown RBP9.43□□□□□ -0.9
COL11A1-205ENST00000447608 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
COL11A1-205ENST00000447608 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 J3QL48 77 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 PHACTR2O75167 634 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 POLR3DP05423 398 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-205ENST00000447608 RNF144AP50876 292 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-205ENST00000447608 ARSDP51689 593 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 NXPE4Q6UWF7 544 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 BICDL1Q6ZP65 573 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 VPS37DQ86XT2 251 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 ELP3Q9H9T3 547 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 TMEM63CQ9P1W3 806 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 KCNMB2Q9Y691 235 aa9.42□□□□□ -0.9
COL11A1-205ENST00000447608 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
COL11A1-205ENST00000447608 PDE12Q6L8Q7 609 aaKnown RBP9.41□□□□□ -0.9
COL11A1-205ENST00000447608 MCF2L2Q86YR7 1114 aa9.41□□□□□ -0.9
COL11A1-205ENST00000447608 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
COL11A1-205ENST00000447608 ANKIB1Q9P2G1 1089 aa9.41□□□□□ -0.9
COL11A1-205ENST00000447608 ST13P50502 369 aaKnown RBP9.4□□□□□ -0.9
COL11A1-205ENST00000447608 PAK2Q13177 524 aa9.4□□□□□ -0.9
COL11A1-205ENST00000447608 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
COL11A1-205ENST00000447608 MEIOBQ8N635 442 aa9.4□□□□□ -0.9
COL11A1-205ENST00000447608 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
COL11A1-205ENST00000447608 PIF1Q9H611 641 aa9.4□□□□□ -0.9
COL11A1-205ENST00000447608 COPRSQ9NQ92 184 aa9.4□□□□□ -0.9
COL11A1-205ENST00000447608 GPC6Q9Y625 555 aaPredicted RBP9.4□□□□□ -0.9
COL11A1-205ENST00000447608 SPATA31C2B4DYI2 1134 aa9.39□□□□□ -0.91
COL11A1-205ENST00000447608 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
COL11A1-205ENST00000447608 GJA8P48165 433 aa9.39□□□□□ -0.91
COL11A1-205ENST00000447608 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
COL11A1-205ENST00000447608 ERMP1Q7Z2K6 904 aa9.39□□□□□ -0.91
COL11A1-205ENST00000447608 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
COL11A1-205ENST00000447608 NEUROD4Q9HD90 331 aa9.39□□□□□ -0.91
COL11A1-205ENST00000447608 ANKRD62A6NC57 917 aa9.38□□□□□ -0.91
COL11A1-205ENST00000447608 FGRP09769 529 aa9.38□□□□□ -0.91
COL11A1-205ENST00000447608 ATP4AP20648 1035 aa9.38□□□□□ -0.91
COL11A1-205ENST00000447608 POU4F2Q12837 409 aa9.38□□□□□ -0.91
COL11A1-205ENST00000447608 LRRC69Q6ZNQ3 347 aa9.38□□□□□ -0.91
COL11A1-205ENST00000447608 HIRIP3Q9BW71 556 aaPredicted RBP9.38□□□□□ -0.91
COL11A1-205ENST00000447608 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
COL11A1-205ENST00000447608 ZSWIM4Q9H7M6 989 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms