RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
DDX56-206ENST00000446987 LRP10Q7Z4F1 713 aa16.01■□□□□ 0.15
DDX56-206ENST00000446987 SMC5Q8IY18 1101 aa16.01■□□□□ 0.15
DDX56-206ENST00000446987 ADRA2BP18089 450 aa16■□□□□ 0.15
DDX56-206ENST00000446987 IGHDP01880 384 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 ZNF445P59923 1031 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 FLAD1Q8NFF5 587 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 SRP68Q9UHB9 627 aaKnown RBP15.99■□□□□ 0.15
DDX56-206ENST00000446987 ZKSCAN5Q9Y2L8 839 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 USP42Q9H9J4 1324 aaKnown RBP15.99■□□□□ 0.15
DDX56-206ENST00000446987 RAB3GAP1Q15042 981 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 PDIA6Q15084 440 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 HSCBQ8IWL3 235 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 SLC16A10Q8TF71 515 aa15.99■□□□□ 0.15
DDX56-206ENST00000446987 IL6STP40189 918 aaPredicted RBP15.98■□□□□ 0.15
DDX56-206ENST00000446987 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
DDX56-206ENST00000446987 MSL1Q68DK7 614 aa15.98■□□□□ 0.15
DDX56-206ENST00000446987 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
DDX56-206ENST00000446987 GYS1P13807 737 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 GTF2F1P35269 517 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■■■■ 30.9
DDX56-206ENST00000446987 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 CLUAP1Q96AJ1 413 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 BCL2L12Q9HB09 334 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 HOXB7P09629 217 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 SLC20A2Q08357 652 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 KLHL40Q2TBA0 621 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 PRIMPOLQ96LW4 560 aa15.97■□□□□ 0.15
DDX56-206ENST00000446987 MYRIPQ8NFW9 859 aa15.96■□□□□ 0.15
DDX56-206ENST00000446987 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
DDX56-206ENST00000446987 NUP98P52948 1817 aa15.96■□□□□ 0.15
DDX56-206ENST00000446987 ANXA1P04083 346 aa15.95■□□□□ 0.14
DDX56-206ENST00000446987 AFDNP55196 1824 aaKnown RBP15.95■□□□□ 0.14
DDX56-206ENST00000446987 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
DDX56-206ENST00000446987 TNPO1Q92973 898 aaKnown RBP15.95■□□□□ 0.14
DDX56-206ENST00000446987 C22orf23Q9BZE7 217 aa15.95■□□□□ 0.14
DDX56-206ENST00000446987 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
DDX56-206ENST00000446987 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.95■□□□□ 0.14
DDX56-206ENST00000446987 EIF2S2P20042 333 aaKnown RBP15.95■□□□□ 0.14
DDX56-206ENST00000446987 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
DDX56-206ENST00000446987 PRDM10Q9NQV6 1147 aa15.95■□□□□ 0.14
DDX56-206ENST00000446987 NARFQ9UHQ1 456 aa15.95■□□□□ 0.14
DDX56-206ENST00000446987 KIF13BQ9NQT8 1826 aa15.94■□□□□ 0.14
DDX56-206ENST00000446987 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
DDX56-206ENST00000446987 GOLGA6L22H0YM25 854 aa15.94■□□□□ 0.14
DDX56-206ENST00000446987 ELL2O00472 640 aaPredicted RBP15.94■□□□□ 0.14
DDX56-206ENST00000446987 CAMTA2O94983 1202 aa15.94■□□□□ 0.14
DDX56-206ENST00000446987 RFC4P35249 363 aa15.94■□□□□ 0.14
DDX56-206ENST00000446987 USPL1Q5W0Q7 1092 aa15.94■□□□□ 0.14
DDX56-206ENST00000446987 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
DDX56-206ENST00000446987 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
DDX56-206ENST00000446987 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
DDX56-206ENST00000446987 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
DDX56-206ENST00000446987 CCDC39Q9UFE4 941 aa15.93■□□□□ 0.14
DDX56-206ENST00000446987 ARFGEF2Q9Y6D5 1785 aa15.93■□□□□ 0.14
DDX56-206ENST00000446987 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
DDX56-206ENST00000446987 TBC1D2BQ9UPU7 963 aa15.93■□□□□ 0.14
DDX56-206ENST00000446987 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
DDX56-206ENST00000446987 MYL6BP14649 208 aa15.92■□□□□ 0.14
DDX56-206ENST00000446987 TTLL7Q6ZT98 887 aa15.92■□□□□ 0.14
DDX56-206ENST00000446987 DZIP3Q86Y13 1208 aaKnown RBP15.91■□□□□ 0.14
DDX56-206ENST00000446987 DDX21Q9NR30 783 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX56-206ENST00000446987 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
DDX56-206ENST00000446987 DDR1Q08345 913 aa15.91■□□□□ 0.14
DDX56-206ENST00000446987 TWISTNBQ3B726 338 aaPredicted RBP15.91■□□□□ 0.14
DDX56-206ENST00000446987 E9PSI1 815 aa15.9■□□□□ 0.14
DDX56-206ENST00000446987 A0A087WZG4 1122 aa15.89■□□□□ 0.13
DDX56-206ENST00000446987 VAMP4O75379 141 aa15.89■□□□□ 0.13
DDX56-206ENST00000446987 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
DDX56-206ENST00000446987 ANKRD31Q8N7Z5 1873 aa15.89■□□□□ 0.13
DDX56-206ENST00000446987 MMP10P09238 476 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 TM4SF1P30408 202 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 HLFQ16534 295 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 C10orf71Q711Q0 1435 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 ZPR1O75312 459 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 NFIXQ14938 502 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 TBC1D9BQ66K14 1250 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 NLGN1Q8N2Q7 840 aa15.88■□□□□ 0.13
DDX56-206ENST00000446987 MAP3K15Q6ZN16 1313 aa15.87■□□□□ 0.13
DDX56-206ENST00000446987 POLRMTO00411 1230 aaKnown RBP15.87■□□□□ 0.13
DDX56-206ENST00000446987 XAGE3Q8WTP9 111 aa15.87■□□□□ 0.13
DDX56-206ENST00000446987 DBF4Q9UBU7 674 aaPredicted RBP15.87■□□□□ 0.13
DDX56-206ENST00000446987 ATP10DQ9P241 1426 aa15.87■□□□□ 0.13
DDX56-206ENST00000446987 COPS6Q7L5N1 327 aa15.86■□□□□ 0.13
DDX56-206ENST00000446987 PHAXQ9H814 394 aaKnown RBP15.86■□□□□ 0.13
DDX56-206ENST00000446987 CARMIL3Q8ND23 1372 aa15.85■□□□□ 0.13
DDX56-206ENST00000446987 BRCA1P38398 1863 aaKnown RBP15.85■□□□□ 0.13
DDX56-206ENST00000446987 RGL2O15211 777 aa15.85■□□□□ 0.13
DDX56-206ENST00000446987 POLD1P28340 1107 aa15.85■□□□□ 0.13
DDX56-206ENST00000446987 RWDD1Q9H446 243 aaPredicted RBP15.85■□□□□ 0.13
DDX56-206ENST00000446987 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
DDX56-206ENST00000446987 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
DDX56-206ENST00000446987 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
DDX56-206ENST00000446987 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
DDX56-206ENST00000446987 CCDC30Q5VVM6 783 aa15.84■□□□□ 0.13
DDX56-206ENST00000446987 G2E3Q7L622 706 aa15.84■□□□□ 0.13
DDX56-206ENST00000446987 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms