RNA–Protein interactions for RNA: ENST00000444536.1

LINC00395-201, long intergenic non-protein coding RNA 395, humanhuman

TSL 3 BASIC

Gene LINC00395, Length 406 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00395-201ENST00000444536 GPTP24298 496 aa13.74□□□□□ -0.21
LINC00395-201ENST00000444536 HOXA10P31260 410 aaPredicted RBP13.74□□□□□ -0.21
LINC00395-201ENST00000444536 EPHX2P34913 555 aa13.74□□□□□ -0.21
LINC00395-201ENST00000444536 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
LINC00395-201ENST00000444536 C3orf67Q6ZVT6 689 aa13.74□□□□□ -0.21
LINC00395-201ENST00000444536 ZNF34Q8IZ26 560 aa13.74□□□□□ -0.21
LINC00395-201ENST00000444536 ZBTB3Q9H5J0 574 aa13.74□□□□□ -0.21
LINC00395-201ENST00000444536 HACL1Q9UJ83 578 aa13.74□□□□□ -0.21
LINC00395-201ENST00000444536 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
LINC00395-201ENST00000444536 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
LINC00395-201ENST00000444536 MYL6BP14649 208 aa13.73□□□□□ -0.21
LINC00395-201ENST00000444536 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
LINC00395-201ENST00000444536 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
LINC00395-201ENST00000444536 DUOX1Q9NRD9 1551 aa13.73□□□□□ -0.21
LINC00395-201ENST00000444536 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
LINC00395-201ENST00000444536 PDIA6Q15084 440 aa13.72□□□□□ -0.21
LINC00395-201ENST00000444536 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
LINC00395-201ENST00000444536 CC2D2BQ6DHV5 1058 aa13.72□□□□□ -0.21
LINC00395-201ENST00000444536 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
LINC00395-201ENST00000444536 GPC2Q8N158 579 aa13.72□□□□□ -0.21
LINC00395-201ENST00000444536 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
LINC00395-201ENST00000444536 TMEM88BA6NKF7 163 aa13.71□□□□□ -0.21
LINC00395-201ENST00000444536 CAPN15O75808 1086 aa13.71□□□□□ -0.21
LINC00395-201ENST00000444536 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
LINC00395-201ENST00000444536 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
LINC00395-201ENST00000444536 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
LINC00395-201ENST00000444536 FOXN1O15353 648 aa13.7□□□□□ -0.22
LINC00395-201ENST00000444536 SCNN1DP51172 638 aa13.7□□□□□ -0.22
LINC00395-201ENST00000444536 PNMA8AQ86V59 439 aaPredicted RBP13.7□□□□□ -0.22
LINC00395-201ENST00000444536 CRAMP1Q96RY5 1269 aa13.7□□□□□ -0.22
LINC00395-201ENST00000444536 TSPYL4Q9UJ04 414 aa13.7□□□□□ -0.22
LINC00395-201ENST00000444536 TAF1P21675 1872 aa13.7□□□□□ -0.22
LINC00395-201ENST00000444536 VEGFBP49765 207 aa13.69□□□□□ -0.22
LINC00395-201ENST00000444536 PARP10Q53GL7 1025 aa13.69□□□□□ -0.22
LINC00395-201ENST00000444536 MAP1SQ66K74 1059 aaPredicted RBP13.69□□□□□ -0.22
LINC00395-201ENST00000444536 JDP2Q8WYK2 163 aa13.69□□□□□ -0.22
LINC00395-201ENST00000444536 COL4A1P02462 1669 aa13.69□□□□□ -0.22
LINC00395-201ENST00000444536 ABCC4O15439 1325 aa13.68□□□□□ -0.22
LINC00395-201ENST00000444536 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
LINC00395-201ENST00000444536 ANXA1P04083 346 aa13.68□□□□□ -0.22
LINC00395-201ENST00000444536 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
LINC00395-201ENST00000444536 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
LINC00395-201ENST00000444536 RBM17Q96I25 401 aaKnown RBP13.68□□□□□ -0.22
LINC00395-201ENST00000444536 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
LINC00395-201ENST00000444536 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
LINC00395-201ENST00000444536 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
LINC00395-201ENST00000444536 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
LINC00395-201ENST00000444536 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
LINC00395-201ENST00000444536 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
LINC00395-201ENST00000444536 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
LINC00395-201ENST00000444536 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
LINC00395-201ENST00000444536 RIPK4P57078 832 aa13.66□□□□□ -0.22
LINC00395-201ENST00000444536 PRDM10Q9NQV6 1147 aa13.66□□□□□ -0.22
LINC00395-201ENST00000444536 ATP6V0A2Q9Y487 856 aa13.66□□□□□ -0.22
LINC00395-201ENST00000444536 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
LINC00395-201ENST00000444536 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
LINC00395-201ENST00000444536 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
LINC00395-201ENST00000444536 EPS15P42566 896 aa13.65□□□□□ -0.22
LINC00395-201ENST00000444536 NLRP10Q86W26 655 aa13.65□□□□□ -0.22
LINC00395-201ENST00000444536 NIM1KQ8IY84 436 aa13.65□□□□□ -0.22
LINC00395-201ENST00000444536 NLRP3Q96P20 1036 aa13.65□□□□□ -0.22
LINC00395-201ENST00000444536 UTP14AQ9BVJ6 771 aaKnown RBP13.65□□□□□ -0.22
LINC00395-201ENST00000444536 RTFDC1Q9BY42 306 aaPredicted RBP13.65□□□□□ -0.22
LINC00395-201ENST00000444536 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
LINC00395-201ENST00000444536 WBP1LQ9NX94 342 aa13.65□□□□□ -0.22
LINC00395-201ENST00000444536 TCERG1O14776 1098 aaKnown RBP13.64□□□□□ -0.23
LINC00395-201ENST00000444536 LMOD1P29536 600 aaPredicted RBP13.64□□□□□ -0.23
LINC00395-201ENST00000444536 FMR1Q06787 632 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00395-201ENST00000444536 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
LINC00395-201ENST00000444536 RALBP1Q15311 655 aa13.64□□□□□ -0.23
LINC00395-201ENST00000444536 AOC3Q16853 763 aa13.64□□□□□ -0.23
LINC00395-201ENST00000444536 KRT24Q2M2I5 525 aa13.64□□□□□ -0.23
LINC00395-201ENST00000444536 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
LINC00395-201ENST00000444536 HSP90AB3PQ58FF7 597 aa13.63□□□□□ -0.23
LINC00395-201ENST00000444536 COPS6Q7L5N1 327 aa13.63□□□□□ -0.23
LINC00395-201ENST00000444536 XAGE3Q8WTP9 111 aa13.63□□□□□ -0.23
LINC00395-201ENST00000444536 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
LINC00395-201ENST00000444536 HSPA8P11142 646 aaKnown RBP13.62□□□□□ -0.23
LINC00395-201ENST00000444536 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
LINC00395-201ENST00000444536 CXCL9Q07325 125 aa13.62□□□□□ -0.23
LINC00395-201ENST00000444536 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
LINC00395-201ENST00000444536 USP50Q70EL3 339 aaPredicted RBP13.62□□□□□ -0.23
LINC00395-201ENST00000444536 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
LINC00395-201ENST00000444536 AIDAQ96BJ3 306 aa13.62□□□□□ -0.23
LINC00395-201ENST00000444536 GPRC5DQ9NZD1 345 aa13.62□□□□□ -0.23
LINC00395-201ENST00000444536 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
LINC00395-201ENST00000444536 MYBBP1AQ9BQG0 1328 aaKnown RBP13.62□□□□□ -0.23
LINC00395-201ENST00000444536 CDHR2Q9BYE9 1310 aa13.62□□□□□ -0.23
LINC00395-201ENST00000444536 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
LINC00395-201ENST00000444536 TRAF5O00463 557 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 CHL1O00533 1208 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 KIAA2012Q0VF49 1180 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 GRAPQ13588 217 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 SUPT20HQ8NEM7 779 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
LINC00395-201ENST00000444536 ADARB2Q9NS39 739 aaKnown RBP13.61□□□□□ -0.23
LINC00395-201ENST00000444536 CHPF2Q9P2E5 772 aa13.61□□□□□ -0.23
LINC00395-201ENST00000444536 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms