RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 TLR7Q9NYK1 1049 aaKnown RBP13.73□□□□□ -0.21
HCFC1-203ENST00000444191 FLT4P35916 1363 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 SSH3Q8TE77 659 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 CHMP4AQ9BY43 222 aa13.73□□□□□ -0.21
HCFC1-203ENST00000444191 SCAND2PQ9GZW5 306 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-203ENST00000444191 PDE4CQ08493 712 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
HCFC1-203ENST00000444191 LSG1Q9H089 658 aaKnown RBP13.72□□□□□ -0.21
HCFC1-203ENST00000444191 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 CDK11BP21127 795 aaKnown RBP13.72□□□□□ -0.21
HCFC1-203ENST00000444191 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 STK38Q15208 465 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 Q6ZUG5 572 aa13.72□□□□□ -0.21
HCFC1-203ENST00000444191 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
HCFC1-203ENST00000444191 A0A0D9SFI3 127 aa13.71□□□□□ -0.21
HCFC1-203ENST00000444191 GOLIM4O00461 696 aa13.71□□□□□ -0.21
HCFC1-203ENST00000444191 NAA30Q147X3 362 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-203ENST00000444191 NBPF6Q5VWK0 638 aa13.71□□□□□ -0.21
HCFC1-203ENST00000444191 NBPF4Q96M43 638 aa13.71□□□□□ -0.21
HCFC1-203ENST00000444191 CCDC94Q9BW85 323 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-203ENST00000444191 CFAP74Q9C0B2 1584 aa13.71□□□□□ -0.21
HCFC1-203ENST00000444191 EAF2Q96CJ1 260 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-203ENST00000444191 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
HCFC1-203ENST00000444191 CBX8Q9HC52 389 aa13.71□□□□□ -0.21
HCFC1-203ENST00000444191 CHGBP05060 677 aa13.71□□□□□ -0.22
HCFC1-203ENST00000444191 ANKRD1Q15327 319 aa13.71□□□□□ -0.22
HCFC1-203ENST00000444191 OTUD7BQ6GQQ9 843 aa13.71□□□□□ -0.22
HCFC1-203ENST00000444191 USP16Q9Y5T5 823 aa13.71□□□□□ -0.22
HCFC1-203ENST00000444191 NR1I2O75469 434 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 SYNE3Q6ZMZ3 975 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 PDILTQ8N807 584 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 PI4K2BQ8TCG2 481 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-203ENST00000444191 PTPRMP28827 1452 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 SLC27A2O14975 620 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
HCFC1-203ENST00000444191 NEK1Q96PY6 1258 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 NRXN1Q9ULB1 1477 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 GRM8O00222 908 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 RGS12O14924 1447 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 SETBP1Q9Y6X0 1596 aa13.7□□□□□ -0.22
HCFC1-203ENST00000444191 CD163L1Q9NR16 1453 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 HIP1O00291 1037 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 TPM3P06753 285 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 PTPN14Q15678 1187 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 SMAP1Q8IYB5 467 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-203ENST00000444191 XAGE3Q8WTP9 111 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 SUCLG2Q96I99 432 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 MAP3K5Q99683 1374 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 A0A087WZG4 1122 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 KCNA6P17658 529 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 STAP2Q9UGK3 403 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 KIF24Q5T7B8 1368 aa13.69□□□□□ -0.22
HCFC1-203ENST00000444191 TTLL5Q6EMB2 1281 aa13.68□□□□□ -0.22
HCFC1-203ENST00000444191 CCDC144CPQ8IYA2 1237 aa13.68□□□□□ -0.22
HCFC1-203ENST00000444191 CFAP45Q9UL16 551 aa13.68□□□□□ -0.22
HCFC1-203ENST00000444191 KIDINS220Q9ULH0 1771 aa13.68□□□□□ -0.22
HCFC1-203ENST00000444191 INO80Q9ULG1 1556 aaPredicted RBP13.68□□□□□ -0.22
HCFC1-203ENST00000444191 SKILP12757 684 aa13.68□□□□□ -0.22
HCFC1-203ENST00000444191 TPM4P67936 248 aa13.68□□□□□ -0.22
HCFC1-203ENST00000444191 CGNQ9P2M7 1197 aaKnown RBP13.68□□□□□ -0.22
HCFC1-203ENST00000444191 TAF6LQ9Y6J9 622 aa13.68□□□□□ -0.22
HCFC1-203ENST00000444191 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
HCFC1-203ENST00000444191 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 EIF4A1P60842 406 aaKnown RBP13.67□□□□□ -0.22
HCFC1-203ENST00000444191 ARID5BQ14865 1188 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 ZNF589Q86UQ0 364 aaPredicted RBP13.67□□□□□ -0.22
HCFC1-203ENST00000444191 CPS1P31327 1500 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 RALYLQ86SE5 291 aaKnown RBP13.67□□□□□ -0.22
HCFC1-203ENST00000444191 AOPEPQ8N6M6 819 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 LEO1Q8WVC0 666 aaPredicted RBP13.67□□□□□ -0.22
HCFC1-203ENST00000444191 AATKQ6ZMQ8 1374 aa13.67□□□□□ -0.22
HCFC1-203ENST00000444191 TIMM10P62072 90 aa13.66□□□□□ -0.22
HCFC1-203ENST00000444191 TFCP2Q12800 502 aa13.66□□□□□ -0.22
HCFC1-203ENST00000444191 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
HCFC1-203ENST00000444191 PTPN21Q16825 1174 aa13.66□□□□□ -0.22
HCFC1-203ENST00000444191 CEP135Q66GS9 1140 aa13.66□□□□□ -0.22
HCFC1-203ENST00000444191 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
HCFC1-203ENST00000444191 MAP2P11137 1827 aaKnown RBP13.66□□□□□ -0.22
HCFC1-203ENST00000444191 ARHGEF40Q8TER5 1519 aa13.66□□□□□ -0.22
HCFC1-203ENST00000444191 MYO3AQ8NEV4 1616 aa13.66□□□□□ -0.22
HCFC1-203ENST00000444191 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
HCFC1-203ENST00000444191 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms