RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 SNED1Q8TER0 1413 aa22.53■■□□□ 1.2
FAM20B-202ENST00000440702 IBTKQ9P2D0 1353 aaPredicted RBP22.52■■□□□ 1.2
FAM20B-202ENST00000440702 NTSR2O95665 410 aa22.52■■□□□ 1.2
FAM20B-202ENST00000440702 ANXA1P04083 346 aa22.52■■□□□ 1.2
FAM20B-202ENST00000440702 EPHX2P34913 555 aa22.52■■□□□ 1.2
FAM20B-202ENST00000440702 RIPK4P57078 832 aa22.52■■□□□ 1.2
FAM20B-202ENST00000440702 C3orf67Q6ZVT6 689 aa22.52■■□□□ 1.2
FAM20B-202ENST00000440702 RIC1Q4ADV7 1423 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 FZD9O00144 591 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 GIGYF2Q6Y7W6 1299 aaKnown RBP22.51■■□□□ 1.19
FAM20B-202ENST00000440702 ZNF34Q8IZ26 560 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 JDP2Q8WYK2 163 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 NECTIN2Q92692 538 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 PSMD1Q99460 953 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 ERBB4Q15303 1308 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 PASKQ96RG2 1323 aa22.51■■□□□ 1.19
FAM20B-202ENST00000440702 ADAMTSL1Q8N6G6 1762 aa22.5■■□□□ 1.19
FAM20B-202ENST00000440702 PPEF1O14829 653 aaPredicted RBP22.5■■□□□ 1.19
FAM20B-202ENST00000440702 PROSER3Q2NL68 480 aa22.5■■□□□ 1.19
FAM20B-202ENST00000440702 RBM17Q96I25 401 aaKnown RBP22.5■■□□□ 1.19
FAM20B-202ENST00000440702 GJA3Q9Y6H8 435 aa22.5■■□□□ 1.19
FAM20B-202ENST00000440702 HOXA10P31260 410 aaPredicted RBP22.49■■□□□ 1.19
FAM20B-202ENST00000440702 PPP1R42Q7Z4L9 355 aa22.49■■□□□ 1.19
FAM20B-202ENST00000440702 CNTNAP1P78357 1384 aa22.49■■□□□ 1.19
FAM20B-202ENST00000440702 ANKRD36CQ5JPF3 1778 aa22.48■■□□□ 1.19
FAM20B-202ENST00000440702 EIF6P56537 245 aaKnown RBP22.48■■□□□ 1.19
FAM20B-202ENST00000440702 PDIA6Q15084 440 aa22.48■■□□□ 1.19
FAM20B-202ENST00000440702 GPC2Q8N158 579 aa22.48■■□□□ 1.19
FAM20B-202ENST00000440702 LARGE2Q8N3Y3 721 aa22.48■■□□□ 1.19
FAM20B-202ENST00000440702 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
FAM20B-202ENST00000440702 NEUROD2Q15784 382 aa22.47■■□□□ 1.19
FAM20B-202ENST00000440702 MAP1SQ66K74 1059 aaPredicted RBP22.47■■□□□ 1.19
FAM20B-202ENST00000440702 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
FAM20B-202ENST00000440702 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
FAM20B-202ENST00000440702 CCDC146Q8IYE0 955 aa22.47■■□□□ 1.19
FAM20B-202ENST00000440702 LAMB2P55268 1798 aa22.47■■□□□ 1.19
FAM20B-202ENST00000440702 LTBP1Q14766 1721 aa22.46■■□□□ 1.19
FAM20B-202ENST00000440702 TMEM88BA6NKF7 163 aa22.46■■□□□ 1.19
FAM20B-202ENST00000440702 ITGBL1O95965 494 aaPredicted RBP22.46■■□□□ 1.19
FAM20B-202ENST00000440702 AIMP1Q12904 312 aaKnown RBP22.46■■□□□ 1.19
FAM20B-202ENST00000440702 PARP10Q53GL7 1025 aa22.46■■□□□ 1.19
FAM20B-202ENST00000440702 CRAMP1Q96RY5 1269 aa22.46■■□□□ 1.19
FAM20B-202ENST00000440702 UTP14AQ9BVJ6 771 aaKnown RBP22.46■■□□□ 1.19
FAM20B-202ENST00000440702 RALBP1Q15311 655 aa22.45■■□□□ 1.18
FAM20B-202ENST00000440702 PNMA8AQ86V59 439 aaPredicted RBP22.45■■□□□ 1.18
FAM20B-202ENST00000440702 LMOD3Q0VAK6 560 aa22.44■■□□□ 1.18
FAM20B-202ENST00000440702 ZNF428Q96B54 188 aa22.44■■□□□ 1.18
FAM20B-202ENST00000440702 NLRP3Q96P20 1036 aa22.44■■□□□ 1.18
FAM20B-202ENST00000440702 LAS1LQ9Y4W2 734 aaKnown RBP22.44■■□□□ 1.18
FAM20B-202ENST00000440702 LMOD1P29536 600 aaPredicted RBP22.43■■□□□ 1.18
FAM20B-202ENST00000440702 KRT24Q2M2I5 525 aa22.43■■□□□ 1.18
FAM20B-202ENST00000440702 NIM1KQ8IY84 436 aa22.43■■□□□ 1.18
FAM20B-202ENST00000440702 CNTROBQ8N137 903 aa22.43■■□□□ 1.18
FAM20B-202ENST00000440702 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
FAM20B-202ENST00000440702 ABCC4O15439 1325 aa22.42■■□□□ 1.18
FAM20B-202ENST00000440702 PPIP5K2O43314 1243 aa22.42■■□□□ 1.18
FAM20B-202ENST00000440702 VEGFBP49765 207 aa22.42■■□□□ 1.18
FAM20B-202ENST00000440702 AOC3Q16853 763 aa22.42■■□□□ 1.18
FAM20B-202ENST00000440702 COPS6Q7L5N1 327 aa22.42■■□□□ 1.18
FAM20B-202ENST00000440702 TAF1P21675 1872 aa22.41■■□□□ 1.18
FAM20B-202ENST00000440702 FOXN1O15353 648 aa22.41■■□□□ 1.18
FAM20B-202ENST00000440702 HCLS1P14317 486 aaPredicted RBP22.41■■□□□ 1.18
FAM20B-202ENST00000440702 EPS15P42566 896 aa22.41■■□□□ 1.18
FAM20B-202ENST00000440702 DDX10Q13206 875 aaKnown RBP22.41■■□□□ 1.18
FAM20B-202ENST00000440702 TMX4Q9H1E5 349 aaPredicted RBP22.41■■□□□ 1.18
FAM20B-202ENST00000440702 BABAM1Q9NWV8 329 aa22.41■■□□□ 1.18
FAM20B-202ENST00000440702 SCNN1DP51172 638 aa22.4■■□□□ 1.18
FAM20B-202ENST00000440702 GRIPAP1Q4V328 841 aa22.4■■□□□ 1.18
FAM20B-202ENST00000440702 MYBBP1AQ9BQG0 1328 aaKnown RBP22.39■■□□□ 1.18
FAM20B-202ENST00000440702 NLRP10Q86W26 655 aa22.39■■□□□ 1.17
FAM20B-202ENST00000440702 ATP6V0A2Q9Y487 856 aa22.39■■□□□ 1.17
FAM20B-202ENST00000440702 FMR1Q06787 632 aaKnown RBP eCLIP22.38■■□□□ 1.179e-8■□□□□ 11.3
FAM20B-202ENST00000440702 HSP90AB3PQ58FF7 597 aa22.38■■□□□ 1.17
FAM20B-202ENST00000440702 SLC10A5Q5PT55 438 aa22.38■■□□□ 1.17
FAM20B-202ENST00000440702 ABT1Q9ULW3 272 aaKnown RBP22.38■■□□□ 1.17
FAM20B-202ENST00000440702 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
FAM20B-202ENST00000440702 AIDAQ96BJ3 306 aa22.37■■□□□ 1.17
FAM20B-202ENST00000440702 CHPF2Q9P2E5 772 aa22.37■■□□□ 1.17
FAM20B-202ENST00000440702 TRMT112Q9UI30 125 aaKnown RBP22.37■■□□□ 1.17
FAM20B-202ENST00000440702 DDX21Q9NR30 783 aaKnown RBP eCLIP22.36■■□□□ 1.17
FAM20B-202ENST00000440702 TRPM7Q96QT4 1865 aa22.36■■□□□ 1.17
FAM20B-202ENST00000440702 CHL1O00533 1208 aa22.35■■□□□ 1.17
FAM20B-202ENST00000440702 TCIRG1Q13488 830 aa22.35■■□□□ 1.17
FAM20B-202ENST00000440702 DEFB115Q30KQ5 88 aa22.35■■□□□ 1.17
FAM20B-202ENST00000440702 DPP8Q6V1X1 898 aaPredicted RBP22.35■■□□□ 1.17
FAM20B-202ENST00000440702 TRIM35Q9UPQ4 493 aa22.35■■□□□ 1.17
FAM20B-202ENST00000440702 DDX60Q8IY21 1712 aaKnown RBP22.34■■□□□ 1.17
FAM20B-202ENST00000440702 SH3TC1Q8TE82 1336 aa22.34■■□□□ 1.17
FAM20B-202ENST00000440702 HDGFL1Q5TGJ6 251 aa22.34■■□□□ 1.17
FAM20B-202ENST00000440702 DDX46Q7L014 1031 aaKnown RBP22.34■■□□□ 1.17
FAM20B-202ENST00000440702 SUPT20HQ8NEM7 779 aa22.34■■□□□ 1.17
FAM20B-202ENST00000440702 RUNDC1Q96C34 613 aa22.34■■□□□ 1.17
FAM20B-202ENST00000440702 RASSF10A6NK89 507 aa22.33■■□□□ 1.17
FAM20B-202ENST00000440702 TRAF5O00463 557 aa22.33■■□□□ 1.17
FAM20B-202ENST00000440702 PAXIP1Q6ZW49 1069 aaPredicted RBP22.33■■□□□ 1.17
FAM20B-202ENST00000440702 MPNDQ8N594 471 aa22.33■■□□□ 1.17
FAM20B-202ENST00000440702 BBOX1O75936 387 aa22.32■■□□□ 1.16
FAM20B-202ENST00000440702 CTCFP49711 727 aaPredicted RBP22.32■■□□□ 1.16
FAM20B-202ENST00000440702 CXCL9Q07325 125 aa22.32■■□□□ 1.16
FAM20B-202ENST00000440702 GRAPQ13588 217 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms