RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 UBN2Q6ZU65 1347 aa25.28■■□□□ 1.64
MUC1-211ENST00000438413 ITGBL1O95965 494 aaPredicted RBP25.27■■□□□ 1.64
MUC1-211ENST00000438413 MAPK8IP3Q9UPT6 1336 aa25.27■■□□□ 1.64
MUC1-211ENST00000438413 CC2D2BQ6DHV5 1058 aa25.26■■□□□ 1.63
MUC1-211ENST00000438413 GPC2Q8N158 579 aa25.26■■□□□ 1.63
MUC1-211ENST00000438413 JDP2Q8WYK2 163 aa25.26■■□□□ 1.63
MUC1-211ENST00000438413 PNNQ9H307 717 aaKnown RBP25.26■■□□□ 1.63
MUC1-211ENST00000438413 SUSD4Q5VX71 490 aa25.25■■□□□ 1.63
MUC1-211ENST00000438413 PNMA8AQ86V59 439 aaPredicted RBP25.25■■□□□ 1.63
MUC1-211ENST00000438413 COL4A5P29400 1685 aa25.25■■□□□ 1.63
MUC1-211ENST00000438413 ERBB4Q15303 1308 aa25.24■■□□□ 1.63
MUC1-211ENST00000438413 TMEM88BA6NKF7 163 aa25.24■■□□□ 1.63
MUC1-211ENST00000438413 HOXA10P31260 410 aaPredicted RBP25.24■■□□□ 1.63
MUC1-211ENST00000438413 ZNF34Q8IZ26 560 aa25.23■■□□□ 1.63
MUC1-211ENST00000438413 NTSR2O95665 410 aa25.22■■□□□ 1.63
MUC1-211ENST00000438413 EIF6P56537 245 aaKnown RBP25.22■■□□□ 1.63
MUC1-211ENST00000438413 GIGYF2Q6Y7W6 1299 aaKnown RBP25.22■■□□□ 1.63
MUC1-211ENST00000438413 RBM17Q96I25 401 aaKnown RBP25.22■■□□□ 1.63
MUC1-211ENST00000438413 GRIPAP1Q4V328 841 aa25.21■■□□□ 1.63
MUC1-211ENST00000438413 TSPYL4Q9UJ04 414 aa25.21■■□□□ 1.63
MUC1-211ENST00000438413 GJA3Q9Y6H8 435 aa25.21■■□□□ 1.63
MUC1-211ENST00000438413 LTBP1Q14766 1721 aa25.2■■□□□ 1.63
MUC1-211ENST00000438413 PPEF1O14829 653 aaPredicted RBP25.2■■□□□ 1.62
MUC1-211ENST00000438413 MAP1SQ66K74 1059 aaPredicted RBP25.2■■□□□ 1.62
MUC1-211ENST00000438413 PPP1R42Q7Z4L9 355 aa25.2■■□□□ 1.62
MUC1-211ENST00000438413 CNTROBQ8N137 903 aa25.2■■□□□ 1.62
MUC1-211ENST00000438413 CRAMP1Q96RY5 1269 aa25.2■■□□□ 1.62
MUC1-211ENST00000438413 TCERG1O14776 1098 aaKnown RBP25.19■■□□□ 1.62
MUC1-211ENST00000438413 VEGFBP49765 207 aa25.19■■□□□ 1.62
MUC1-211ENST00000438413 LARGE2Q8N3Y3 721 aa25.19■■□□□ 1.62
MUC1-211ENST00000438413 ANKRD36CQ5JPF3 1778 aa25.18■■□□□ 1.62
MUC1-211ENST00000438413 FOXN1O15353 648 aa25.18■■□□□ 1.62
MUC1-211ENST00000438413 PARP10Q53GL7 1025 aa25.18■■□□□ 1.62
MUC1-211ENST00000438413 C3orf67Q6ZVT6 689 aa25.18■■□□□ 1.62
MUC1-211ENST00000438413 SLC51AQ86UW1 340 aa25.18■■□□□ 1.62
MUC1-211ENST00000438413 EIF2S2P20042 333 aaKnown RBP25.17■■□□□ 1.62
MUC1-211ENST00000438413 LMOD1P29536 600 aaPredicted RBP25.17■■□□□ 1.62
MUC1-211ENST00000438413 RIPK4P57078 832 aa25.16■■□□□ 1.62
MUC1-211ENST00000438413 LRP10Q7Z4F1 713 aa25.16■■□□□ 1.62
MUC1-211ENST00000438413 NLRP3Q96P20 1036 aa25.16■■□□□ 1.62
MUC1-211ENST00000438413 LAMB2P55268 1798 aa25.16■■□□□ 1.62
MUC1-211ENST00000438413 PDIA6Q15084 440 aa25.15■■□□□ 1.62
MUC1-211ENST00000438413 AIDAQ96BJ3 306 aa25.15■■□□□ 1.62
MUC1-211ENST00000438413 RASSF10A6NK89 507 aa25.14■■□□□ 1.62
MUC1-211ENST00000438413 SCNN1DP51172 638 aa25.14■■□□□ 1.62
MUC1-211ENST00000438413 UTP14AQ9BVJ6 771 aaKnown RBP25.14■■□□□ 1.62
MUC1-211ENST00000438413 TMX4Q9H1E5 349 aaPredicted RBP25.14■■□□□ 1.62
MUC1-211ENST00000438413 ANXA1P04083 346 aa25.13■■□□□ 1.61
MUC1-211ENST00000438413 PROSER3Q2NL68 480 aa25.13■■□□□ 1.61
MUC1-211ENST00000438413 DEFB115Q30KQ5 88 aa25.13■■□□□ 1.61
MUC1-211ENST00000438413 NIM1KQ8IY84 436 aa25.13■■□□□ 1.61
MUC1-211ENST00000438413 PPIP5K2O43314 1243 aa25.12■■□□□ 1.61
MUC1-211ENST00000438413 EPS15P42566 896 aa25.12■■□□□ 1.61
MUC1-211ENST00000438413 SLC10A5Q5PT55 438 aa25.12■■□□□ 1.61
MUC1-211ENST00000438413 PRDM10Q9NQV6 1147 aa25.12■■□□□ 1.61
MUC1-211ENST00000438413 BABAM1Q9NWV8 329 aa25.12■■□□□ 1.61
MUC1-211ENST00000438413 CTCFP49711 727 aaPredicted RBP25.11■■□□□ 1.61
MUC1-211ENST00000438413 DDX21Q9NR30 783 aaKnown RBP eCLIP25.11■■□□□ 1.61
MUC1-211ENST00000438413 ABT1Q9ULW3 272 aaKnown RBP25.11■■□□□ 1.61
MUC1-211ENST00000438413 ATP6V0A2Q9Y487 856 aa25.11■■□□□ 1.61
MUC1-211ENST00000438413 ABCC4O15439 1325 aa25.11■■□□□ 1.61
MUC1-211ENST00000438413 TMPOP42166 694 aaKnown RBP25.1■■□□□ 1.61
MUC1-211ENST00000438413 LMOD3Q0VAK6 560 aa25.1■■□□□ 1.61
MUC1-211ENST00000438413 AOC3Q16853 763 aa25.1■■□□□ 1.61
MUC1-211ENST00000438413 WBP1LQ9NX94 342 aa25.1■■□□□ 1.61
MUC1-211ENST00000438413 TRPM7Q96QT4 1865 aa25.09■■□□□ 1.61
MUC1-211ENST00000438413 HSP90AB3PQ58FF7 597 aa25.09■■□□□ 1.61
MUC1-211ENST00000438413 USP50Q70EL3 339 aaPredicted RBP25.09■■□□□ 1.61
MUC1-211ENST00000438413 NECTIN2Q92692 538 aa25.09■■□□□ 1.61
MUC1-211ENST00000438413 VPS33BQ9H267 617 aa25.09■■□□□ 1.61
MUC1-211ENST00000438413 AIMP1Q12904 312 aaKnown RBP25.08■■□□□ 1.61
MUC1-211ENST00000438413 RALBP1Q15311 655 aa25.08■■□□□ 1.61
MUC1-211ENST00000438413 COPS6Q7L5N1 327 aa25.08■■□□□ 1.61
MUC1-211ENST00000438413 WDR33Q9C0J8 1336 aaKnown RBP25.08■■□□□ 1.6
MUC1-211ENST00000438413 SUPT20HQ8NEM7 779 aa25.07■■□□□ 1.6
MUC1-211ENST00000438413 XAGE3Q8WTP9 111 aa25.07■■□□□ 1.6
MUC1-211ENST00000438413 FMR1Q06787 632 aaKnown RBP eCLIP25.06■■□□□ 1.6
MUC1-211ENST00000438413 NLRP10Q86W26 655 aa25.06■■□□□ 1.6
MUC1-211ENST00000438413 THSD7BQ9C0I4 1608 aa25.05■■□□□ 1.6
MUC1-211ENST00000438413 BBOX1O75936 387 aa25.05■■□□□ 1.6
MUC1-211ENST00000438413 HCLS1P14317 486 aaPredicted RBP25.05■■□□□ 1.6
MUC1-211ENST00000438413 LBX1P52954 281 aa25.05■■□□□ 1.6
MUC1-211ENST00000438413 SP8Q8IXZ3 490 aa25.05■■□□□ 1.6
MUC1-211ENST00000438413 RTFDC1Q9BY42 306 aaPredicted RBP25.05■■□□□ 1.6
MUC1-211ENST00000438413 GPRC5DQ9NZD1 345 aa25.05■■□□□ 1.6
MUC1-211ENST00000438413 ZNRF3Q9ULT6 936 aa25.05■■□□□ 1.6
MUC1-211ENST00000438413 TAF1P21675 1872 aa25.04■■□□□ 1.6
MUC1-211ENST00000438413 CXCL9Q07325 125 aa25.04■■□□□ 1.6
MUC1-211ENST00000438413 DPP8Q6V1X1 898 aaPredicted RBP25.04■■□□□ 1.6
MUC1-211ENST00000438413 ADARB2Q9NS39 739 aaKnown RBP25.04■■□□□ 1.6
MUC1-211ENST00000438413 TRMT112Q9UI30 125 aaKnown RBP25.04■■□□□ 1.6
MUC1-211ENST00000438413 MAP2K1Q02750 393 aaPredicted RBP25.03■■□□□ 1.6
MUC1-211ENST00000438413 TCIRG1Q13488 830 aa25.03■■□□□ 1.6
MUC1-211ENST00000438413 NEUROD2Q15784 382 aa25.03■■□□□ 1.6
MUC1-211ENST00000438413 DDX46Q7L014 1031 aaKnown RBP25.03■■□□□ 1.6
MUC1-211ENST00000438413 MPNDQ8N594 471 aa25.03■■□□□ 1.6
MUC1-211ENST00000438413 TRAF5O00463 557 aa25.02■■□□□ 1.6
MUC1-211ENST00000438413 KRT24Q2M2I5 525 aa25.02■■□□□ 1.6
MUC1-211ENST00000438413 PAXIP1Q6ZW49 1069 aaPredicted RBP25.02■■□□□ 1.6
MUC1-211ENST00000438413 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms