RNA–Protein interactions for RNA: ENST00000437733.5

TRAPPC12-208, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-208ENST00000437733 VAMP4O75379 141 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 AKAP4Q5JQC9 854 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 TJAP1Q5JTD0 557 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 C1orf141Q5JVX7 400 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 FTSJ3Q8IY81 847 aaKnown RBP8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 C8orf58Q8NAV2 365 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 PANK1Q8TE04 598 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 RAPGEF4Q8WZA2 1011 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 PRDM11Q9NQV5 511 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 TSPYL4Q9UJ04 414 aa8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 PARP4Q9UKK3 1724 aaKnown RBP8.06□□□□□ -1.12
TRAPPC12-208ENST00000437733 KDM3BQ7LBC6 1761 aa8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 COL22A1Q8NFW1 1626 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 ELL2O00472 640 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 TATP17735 454 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 AAMPQ13685 434 aa8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 TSPYL6Q8N831 410 aa8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 IRX2Q9BZI1 471 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 BABAM1Q9NWV8 329 aa8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 NOB1Q9ULX3 412 aaKnown RBP8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 COG6Q9Y2V7 657 aa8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 PKD1L3Q7Z443 1732 aa8.05□□□□□ -1.12
TRAPPC12-208ENST00000437733 OVOS2A0A0G2JMS6 1433 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 TAF7Q15545 349 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 ATF7IPQ6VMQ6 1270 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 IL17REQ8NFR9 667 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 GOPCQ9HD26 462 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 MIS18AQ9NYP9 233 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 SPG7Q9UQ90 795 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 TNNQ9UQP3 1299 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 PLEKHG2Q9H7P9 1386 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 SIPA1L3O60292 1781 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 COL14A1Q05707 1796 aaKnown RBP8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 SCN11AQ9UI33 1791 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 CACNA1FO60840 1977 aa8.04□□□□□ -1.12
TRAPPC12-208ENST00000437733 ADAMTS7Q9UKP4 1686 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 CEMIPQ8WUJ3 1361 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 RLBP1P12271 317 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 TRIM27P14373 513 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 TEFQ10587 303 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 MVPQ14764 893 aaKnown RBP8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 CCDC97Q96F63 343 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 MTRQ99707 1265 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 MEGF6O75095 1541 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 SOS1Q07889 1333 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 WDR17Q8IZU2 1322 aa8.03□□□□□ -1.12
TRAPPC12-208ENST00000437733 COL5A2P05997 1499 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 TCERG1O14776 1098 aaKnown RBP8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 RNMTO43148 476 aaKnown RBP8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 TOM1O60784 492 aa8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 APLP1P51693 650 aa8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 EVA1CP58658 441 aa8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 MPRIPQ6WCQ1 1025 aa8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 TOM1L2Q6ZVM7 507 aa8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 CENPQQ7L2Z9 268 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 ARHGAP45Q92619 1136 aa8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 API5Q9BZZ5 524 aaKnown RBP8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 COL16A1Q07092 1604 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-208ENST00000437733 PTGDRQ13258 359 aa8.01□□□□□ -1.13
TRAPPC12-208ENST00000437733 KRT24Q2M2I5 525 aa8.01□□□□□ -1.13
TRAPPC12-208ENST00000437733 SWT1Q5T5J6 900 aaKnown RBP8.01□□□□□ -1.13
TRAPPC12-208ENST00000437733 ITPRIPQ8IWB1 547 aa8.01□□□□□ -1.13
TRAPPC12-208ENST00000437733 IL21Q9HBE4 155 aa8.01□□□□□ -1.13
TRAPPC12-208ENST00000437733 DDX19BQ9UMR2 479 aa8.01□□□□□ -1.13
TRAPPC12-208ENST00000437733 PLCH1Q4KWH8 1693 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 BTBD11A6QL63 1104 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 RBM26Q5T8P6 1007 aaKnown RBP8□□□□□ -1.13
TRAPPC12-208ENST00000437733 IFNL2Q8IZJ0 200 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 TMEM57Q8N5G2 664 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 RETREG2Q8NC44 543 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 CARD10Q9BWT7 1032 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 STK31Q9BXU1 1019 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 CHMP4AQ9BY43 222 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
TRAPPC12-208ENST00000437733 STRN4Q9NRL3 753 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 KDM2BQ8NHM5 1336 aa8□□□□□ -1.13
TRAPPC12-208ENST00000437733 RNF40O75150 1001 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 HSP90AB1P08238 724 aaKnown RBP7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 PHKG2P15735 406 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 PIP4K2BP78356 416 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 CCDC30Q5VVM6 783 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 SLF2Q8IX21 1173 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 ABCC4O15439 1325 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 PTPRCP08575 1304 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 WNK3Q9BYP7 1800 aa7.99□□□□□ -1.13
TRAPPC12-208ENST00000437733 SHANK3Q9BYB0 1731 aa7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 KDM6AO15550 1401 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 HOXB7P09629 217 aa7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 IL2RBP14784 551 aa7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 EIF4A1P60842 406 aaKnown RBP7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 IRF5Q13568 498 aa7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 LARP1Q6PKG0 1096 aaKnown RBP7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 ZCRB1Q8TBF4 217 aaKnown RBP7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 DCAF5Q96JK2 942 aa7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 RWDD1Q9H446 243 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC12-208ENST00000437733 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms