RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
CTDSPL-205ENST00000436654 SLX4Q8IY92 1834 aa11.65□□□□□ -0.55
CTDSPL-205ENST00000436654 ZNF541Q9H0D2 1346 aa11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 HSPA1AP0DMV8 641 aaKnown RBP11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 HSPA1BP0DMV9 641 aaKnown RBP11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 IARSP41252 1262 aaKnown RBP11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 PPP1R42Q7Z4L9 355 aa11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 XAGE3Q8WTP9 111 aa11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 IBTKQ9P2D0 1353 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL-205ENST00000436654 PCNTO95613 3336 aa11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 CHL1O00533 1208 aa11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 PARP10Q53GL7 1025 aa11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 ZNF428Q96B54 188 aa11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 UTP14AQ9BVJ6 771 aaKnown RBP11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 PRKRIP1Q9H875 184 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL-205ENST00000436654 DLG5Q8TDM6 1919 aa11.62□□□□□ -0.55
CTDSPL-205ENST00000436654 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
CTDSPL-205ENST00000436654 PPEF1O14829 653 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL-205ENST00000436654 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL-205ENST00000436654 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL-205ENST00000436654 CHPF2Q9P2E5 772 aa11.62□□□□□ -0.55
CTDSPL-205ENST00000436654 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 HCLS1P14317 486 aaPredicted RBP11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 HDGFL1Q5TGJ6 251 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 NLRP10Q86W26 655 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 JDP2Q8WYK2 163 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 PSMD1Q99460 953 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
CTDSPL-205ENST00000436654 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 FZD9O00144 591 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 SLC10A5Q5PT55 438 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 CC2D2BQ6DHV5 1058 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
CTDSPL-205ENST00000436654 APAF1O14727 1248 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 EPHX2P34913 555 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 LDHDQ86WU2 507 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 CLEC11AQ9Y240 323 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 ABCC4O15439 1325 aa11.59□□□□□ -0.55
CTDSPL-205ENST00000436654 EIF6P56537 245 aaKnown RBP11.58□□□□□ -0.56
CTDSPL-205ENST00000436654 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
CTDSPL-205ENST00000436654 GPC2Q8N158 579 aa11.58□□□□□ -0.56
CTDSPL-205ENST00000436654 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
CTDSPL-205ENST00000436654 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL-205ENST00000436654 MBIPQ9NS73 344 aa11.58□□□□□ -0.56
CTDSPL-205ENST00000436654 ATP6V0A2Q9Y487 856 aa11.58□□□□□ -0.56
CTDSPL-205ENST00000436654 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 COL4A5P29400 1685 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 PPIP5K2O43314 1243 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 HOXB7P09629 217 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 AOC3Q16853 763 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 GRIPAP1Q4V328 841 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 PLBD2Q8NHP8 589 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
CTDSPL-205ENST00000436654 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 ZNF853P0CG23 659 aa11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 MAP1SQ66K74 1059 aaPredicted RBP11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 DDX46Q7L014 1031 aaKnown RBP11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 NIM1KQ8IY84 436 aa11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 FAM89AQ96GI7 184 aa11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 PASKQ96RG2 1323 aa11.56□□□□□ -0.56
CTDSPL-205ENST00000436654 CCDC88AQ3V6T2 1871 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 BBOX1O75936 387 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 EPS15P42566 896 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 GRAPQ13588 217 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 DPP8Q6V1X1 898 aaPredicted RBP11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 IFT57Q9NWB7 429 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 NUP98P52948 1817 aa11.55□□□□□ -0.56
CTDSPL-205ENST00000436654 SCNN1DP51172 638 aa11.54□□□□□ -0.56
CTDSPL-205ENST00000436654 GNAI1P63096 354 aa11.54□□□□□ -0.56
CTDSPL-205ENST00000436654 CCDC184Q52MB2 194 aa11.54□□□□□ -0.56
CTDSPL-205ENST00000436654 SP8Q8IXZ3 490 aa11.54□□□□□ -0.56
CTDSPL-205ENST00000436654 CNTROBQ8N137 903 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms