RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 RASSF10A6NK89 507 aa15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 GPTP24298 496 aa15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 CRY2Q49AN0 593 aa15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 KIF6Q6ZMV9 814 aa15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 TTLL7Q6ZT98 887 aa15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 PNISRQ8TF01 805 aaKnown RBP15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 NUP98P52948 1817 aa15.39■□□□□ 0.05
CHRNA1-207ENST00000435083 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
CHRNA1-207ENST00000435083 MYL6BP14649 208 aa15.38■□□□□ 0.05
CHRNA1-207ENST00000435083 LMOD1P29536 600 aaPredicted RBP15.38■□□□□ 0.05
CHRNA1-207ENST00000435083 ZBTB3Q9H5J0 574 aa15.38■□□□□ 0.05
CHRNA1-207ENST00000435083 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
CHRNA1-207ENST00000435083 SNED1Q8TER0 1413 aa15.37■□□□□ 0.05
CHRNA1-207ENST00000435083 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-207ENST00000435083 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 COL4A5P29400 1685 aa15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 DLG5Q8TDM6 1919 aa15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 KDM3BQ7LBC6 1761 aa15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 EPS15P42566 896 aa15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 FMR1Q06787 632 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHRNA1-207ENST00000435083 UBN2Q6ZU65 1347 aa15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 PPEF1O14829 653 aaPredicted RBP15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 HSPA8P11142 646 aaKnown RBP15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 GRIPAP1Q4V328 841 aa15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 SLC51AQ86UW1 340 aa15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 CRAMP1Q96RY5 1269 aa15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 THUMPD2Q9BTF0 503 aaKnown RBP15.35■□□□□ 0.05
CHRNA1-207ENST00000435083 LTBP1Q14766 1721 aa15.34■□□□□ 0.05
CHRNA1-207ENST00000435083 RIC1Q4ADV7 1423 aa15.34■□□□□ 0.05
CHRNA1-207ENST00000435083 SCNN1DP51172 638 aa15.34■□□□□ 0.05
CHRNA1-207ENST00000435083 GRM1Q13255 1194 aa15.34■□□□□ 0.05
CHRNA1-207ENST00000435083 NIM1KQ8IY84 436 aa15.34■□□□□ 0.05
CHRNA1-207ENST00000435083 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
CHRNA1-207ENST00000435083 NTSR2O95665 410 aa15.33■□□□□ 0.05
CHRNA1-207ENST00000435083 ZNF34Q8IZ26 560 aa15.33■□□□□ 0.05
CHRNA1-207ENST00000435083 TMX4Q9H1E5 349 aaPredicted RBP15.33■□□□□ 0.05
CHRNA1-207ENST00000435083 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 GIGYF2Q6Y7W6 1299 aaKnown RBP15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 C3orf67Q6ZVT6 689 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 USP50Q70EL3 339 aaPredicted RBP15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 PPP1R42Q7Z4L9 355 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 CAPNS2Q96L46 248 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 TRAF5O00463 557 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 NFE2L2Q16236 605 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 AOC3Q16853 763 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
CHRNA1-207ENST00000435083 ECE1P42892 770 aa15.31■□□□□ 0.04
CHRNA1-207ENST00000435083 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
CHRNA1-207ENST00000435083 CYP4F22Q6NT55 531 aa15.31■□□□□ 0.04
CHRNA1-207ENST00000435083 ABHD8Q96I13 439 aa15.31■□□□□ 0.04
CHRNA1-207ENST00000435083 PLEKHF1Q96S99 279 aa15.31■□□□□ 0.04
CHRNA1-207ENST00000435083 BEGAINQ9BUH8 593 aa15.31■□□□□ 0.04
CHRNA1-207ENST00000435083 CST9Q5W186 159 aa15.3■□□□□ 0.04
CHRNA1-207ENST00000435083 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
CHRNA1-207ENST00000435083 ERBB4Q15303 1308 aa15.3■□□□□ 0.04
CHRNA1-207ENST00000435083 TRPM7Q96QT4 1865 aa15.3■□□□□ 0.04
CHRNA1-207ENST00000435083 EIF2S2P20042 333 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-207ENST00000435083 UTP14AQ9BVJ6 771 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-207ENST00000435083 ADARB2Q9NS39 739 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-207ENST00000435083 ATP6V0A2Q9Y487 856 aa15.29■□□□□ 0.04
CHRNA1-207ENST00000435083 MAPK8IP3Q9UPT6 1336 aa15.29■□□□□ 0.04
CHRNA1-207ENST00000435083 SUPT20HQ8NEM7 779 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 VPS33BQ9H267 617 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 GPRC5DQ9NZD1 345 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 CXCL9Q07325 125 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
CHRNA1-207ENST00000435083 ABCC4O15439 1325 aa15.27■□□□□ 0.03
CHRNA1-207ENST00000435083 ANXA1P04083 346 aa15.27■□□□□ 0.03
CHRNA1-207ENST00000435083 GMPSP49915 693 aaPredicted RBP15.27■□□□□ 0.03
CHRNA1-207ENST00000435083 DPP8Q6V1X1 898 aaPredicted RBP15.27■□□□□ 0.03
CHRNA1-207ENST00000435083 AOC2O75106 756 aa15.26■□□□□ 0.03
CHRNA1-207ENST00000435083 PDIA6Q15084 440 aa15.26■□□□□ 0.03
CHRNA1-207ENST00000435083 CIAPIN1Q6FI81 312 aa15.26■□□□□ 0.03
CHRNA1-207ENST00000435083 MPNDQ8N594 471 aa15.26■□□□□ 0.03
CHRNA1-207ENST00000435083 TSKSQ9UJT2 592 aa15.26■□□□□ 0.03
CHRNA1-207ENST00000435083 THSD7BQ9C0I4 1608 aa15.26■□□□□ 0.03
CHRNA1-207ENST00000435083 BBOX1O75936 387 aa15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 CELF2O95319 508 aaKnown RBP15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 AIMP1Q12904 312 aaKnown RBP15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 PROSER3Q2NL68 480 aa15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 LRP10Q7Z4F1 713 aa15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 SP8Q8IXZ3 490 aa15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 NECTIN2Q92692 538 aa15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 RTFDC1Q9BY42 306 aaPredicted RBP15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 GLIS2Q9BZE0 524 aaPredicted RBP15.25■□□□□ 0.03
CHRNA1-207ENST00000435083 CCDC85CA6NKD9 419 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms