RNA–Protein interactions for RNA: ENST00000434927.5

RBM39-214, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-214ENST00000434927 POTEJP0CG39 1038 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 IARSP41252 1262 aaKnown RBP12.24□□□□□ -0.45
RBM39-214ENST00000434927 RIPK4P57078 832 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 PDIA6Q15084 440 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 SUSD4Q5VX71 490 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 RNF123Q5XPI4 1314 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 PASKQ96RG2 1323 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 CRAMP1Q96RY5 1269 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
RBM39-214ENST00000434927 GPTP24298 496 aa12.23□□□□□ -0.45
RBM39-214ENST00000434927 TMPOP42166 694 aaKnown RBP12.23□□□□□ -0.45
RBM39-214ENST00000434927 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
RBM39-214ENST00000434927 GPC2Q8N158 579 aa12.23□□□□□ -0.45
RBM39-214ENST00000434927 SYNE4Q8N205 404 aa12.23□□□□□ -0.45
RBM39-214ENST00000434927 RPGRQ92834 1020 aaKnown RBP12.23□□□□□ -0.45
RBM39-214ENST00000434927 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
RBM39-214ENST00000434927 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
RBM39-214ENST00000434927 SLC10A5Q5PT55 438 aa12.22□□□□□ -0.45
RBM39-214ENST00000434927 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
RBM39-214ENST00000434927 PNMA8AQ86V59 439 aaPredicted RBP12.22□□□□□ -0.45
RBM39-214ENST00000434927 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
RBM39-214ENST00000434927 RBM17Q96I25 401 aaKnown RBP12.22□□□□□ -0.45
RBM39-214ENST00000434927 ANKRD36CQ5JPF3 1778 aa12.21□□□□□ -0.45
RBM39-214ENST00000434927 ITGBL1O95965 494 aaPredicted RBP12.21□□□□□ -0.45
RBM39-214ENST00000434927 EPHX2P34913 555 aa12.21□□□□□ -0.45
RBM39-214ENST00000434927 COL4A5P29400 1685 aa12.21□□□□□ -0.45
RBM39-214ENST00000434927 CHL1O00533 1208 aa12.2□□□□□ -0.46
RBM39-214ENST00000434927 PPEF1O14829 653 aaPredicted RBP12.2□□□□□ -0.46
RBM39-214ENST00000434927 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
RBM39-214ENST00000434927 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
RBM39-214ENST00000434927 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
RBM39-214ENST00000434927 PROSER3Q2NL68 480 aa12.2□□□□□ -0.46
RBM39-214ENST00000434927 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
RBM39-214ENST00000434927 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
RBM39-214ENST00000434927 UTP14AQ9BVJ6 771 aaKnown RBP12.2□□□□□ -0.46
RBM39-214ENST00000434927 VPS33BQ9H267 617 aa12.2□□□□□ -0.46
RBM39-214ENST00000434927 CNTNAP1P78357 1384 aa12.19□□□□□ -0.46
RBM39-214ENST00000434927 HOXB7P09629 217 aa12.19□□□□□ -0.46
RBM39-214ENST00000434927 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
RBM39-214ENST00000434927 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
RBM39-214ENST00000434927 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
RBM39-214ENST00000434927 TMEM88BA6NKF7 163 aa12.18□□□□□ -0.46
RBM39-214ENST00000434927 MAPK8IP2Q13387 824 aaPredicted RBP12.18□□□□□ -0.46
RBM39-214ENST00000434927 EAPPQ56P03 285 aaPredicted RBP12.18□□□□□ -0.46
RBM39-214ENST00000434927 COPS6Q7L5N1 327 aa12.18□□□□□ -0.46
RBM39-214ENST00000434927 LARGE2Q8N3Y3 721 aa12.18□□□□□ -0.46
RBM39-214ENST00000434927 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
RBM39-214ENST00000434927 DDX21Q9NR30 783 aaKnown RBP eCLIP12.18□□□□□ -0.46
RBM39-214ENST00000434927 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
RBM39-214ENST00000434927 ATP6V0A2Q9Y487 856 aa12.18□□□□□ -0.46
RBM39-214ENST00000434927 LTBP1Q14766 1721 aa12.17□□□□□ -0.46
RBM39-214ENST00000434927 ANXA1P04083 346 aa12.17□□□□□ -0.46
RBM39-214ENST00000434927 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
RBM39-214ENST00000434927 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
RBM39-214ENST00000434927 XAGE3Q8WTP9 111 aa12.17□□□□□ -0.46
RBM39-214ENST00000434927 RTFDC1Q9BY42 306 aaPredicted RBP12.17□□□□□ -0.46
RBM39-214ENST00000434927 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
RBM39-214ENST00000434927 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
RBM39-214ENST00000434927 LAMB2P55268 1798 aa12.17□□□□□ -0.46
RBM39-214ENST00000434927 ABCC4O15439 1325 aa12.16□□□□□ -0.46
RBM39-214ENST00000434927 BBOX1O75936 387 aa12.16□□□□□ -0.46
RBM39-214ENST00000434927 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
RBM39-214ENST00000434927 SCNN1DP51172 638 aa12.16□□□□□ -0.46
RBM39-214ENST00000434927 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
RBM39-214ENST00000434927 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
RBM39-214ENST00000434927 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
RBM39-214ENST00000434927 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
RBM39-214ENST00000434927 SUPT20HQ8NEM7 779 aa12.16□□□□□ -0.46
RBM39-214ENST00000434927 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
RBM39-214ENST00000434927 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
RBM39-214ENST00000434927 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.46
RBM39-214ENST00000434927 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
RBM39-214ENST00000434927 SP8Q8IXZ3 490 aa12.15□□□□□ -0.46
RBM39-214ENST00000434927 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
RBM39-214ENST00000434927 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
RBM39-214ENST00000434927 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 PPIP5K2O43314 1243 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
RBM39-214ENST00000434927 NEUROD2Q15784 382 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 KRT24Q2M2I5 525 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 MAP1SQ66K74 1059 aaPredicted RBP12.14□□□□□ -0.47
RBM39-214ENST00000434927 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
RBM39-214ENST00000434927 TMC4Q7Z404 712 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 CHPF2Q9P2E5 772 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 DBF4Q9UBU7 674 aaPredicted RBP12.14□□□□□ -0.47
RBM39-214ENST00000434927 TRMT112Q9UI30 125 aaKnown RBP12.14□□□□□ -0.47
RBM39-214ENST00000434927 GJA3Q9Y6H8 435 aa12.14□□□□□ -0.47
RBM39-214ENST00000434927 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
RBM39-214ENST00000434927 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
RBM39-214ENST00000434927 HCLS1P14317 486 aaPredicted RBP12.13□□□□□ -0.47
RBM39-214ENST00000434927 EPS15P42566 896 aa12.13□□□□□ -0.47
RBM39-214ENST00000434927 VEGFBP49765 207 aa12.13□□□□□ -0.47
RBM39-214ENST00000434927 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
RBM39-214ENST00000434927 GRAPQ13588 217 aa12.13□□□□□ -0.47
RBM39-214ENST00000434927 AOC3Q16853 763 aa12.13□□□□□ -0.47
RBM39-214ENST00000434927 DPP8Q6V1X1 898 aaPredicted RBP12.13□□□□□ -0.47
RBM39-214ENST00000434927 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms