RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 HOXA10P31260 410 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-210ENST00000434503 CC2D2BQ6DHV5 1058 aa27.27■■□□□ 1.96
LMBR1-210ENST00000434503 PNMA8AQ86V59 439 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-210ENST00000434503 GPC2Q8N158 579 aa27.27■■□□□ 1.96
LMBR1-210ENST00000434503 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
LMBR1-210ENST00000434503 TMEM88BA6NKF7 163 aa27.26■■□□□ 1.95
LMBR1-210ENST00000434503 GPTP24298 496 aa27.26■■□□□ 1.95
LMBR1-210ENST00000434503 JDP2Q8WYK2 163 aa27.26■■□□□ 1.95
LMBR1-210ENST00000434503 ZBTB3Q9H5J0 574 aa27.26■■□□□ 1.95
LMBR1-210ENST00000434503 RIC1Q4ADV7 1423 aa27.25■■□□□ 1.95
LMBR1-210ENST00000434503 IBTKQ9P2D0 1353 aaPredicted RBP27.25■■□□□ 1.95
LMBR1-210ENST00000434503 UBN2Q6ZU65 1347 aa27.25■■□□□ 1.95
LMBR1-210ENST00000434503 RPGRQ92834 1020 aaKnown RBP27.25■■□□□ 1.95
LMBR1-210ENST00000434503 SUSD4Q5VX71 490 aa27.24■■□□□ 1.95
LMBR1-210ENST00000434503 ZNF34Q8IZ26 560 aa27.24■■□□□ 1.95
LMBR1-210ENST00000434503 VEGFBP49765 207 aa27.22■■□□□ 1.95
LMBR1-210ENST00000434503 GRIPAP1Q4V328 841 aa27.22■■□□□ 1.95
LMBR1-210ENST00000434503 GIGYF2Q6Y7W6 1299 aaKnown RBP27.22■■□□□ 1.95
LMBR1-210ENST00000434503 CNTROBQ8N137 903 aa27.22■■□□□ 1.95
LMBR1-210ENST00000434503 ERBB4Q15303 1308 aa27.21■■□□□ 1.95
LMBR1-210ENST00000434503 COL4A5P29400 1685 aa27.21■■□□□ 1.95
LMBR1-210ENST00000434503 FOXN1O15353 648 aa27.21■■□□□ 1.95
LMBR1-210ENST00000434503 EIF6P56537 245 aaKnown RBP27.21■■□□□ 1.95
LMBR1-210ENST00000434503 MAP1SQ66K74 1059 aaPredicted RBP27.21■■□□□ 1.95
LMBR1-210ENST00000434503 CRAMP1Q96RY5 1269 aa27.21■■□□□ 1.95
LMBR1-210ENST00000434503 MYBBP1AQ9BQG0 1328 aaKnown RBP27.2■■□□□ 1.95
LMBR1-210ENST00000434503 NTSR2O95665 410 aa27.2■■□□□ 1.94
LMBR1-210ENST00000434503 RBM17Q96I25 401 aaKnown RBP27.2■■□□□ 1.94
LMBR1-210ENST00000434503 GJA3Q9Y6H8 435 aa27.19■■□□□ 1.94
LMBR1-210ENST00000434503 RIPK4P57078 832 aa27.18■■□□□ 1.94
LMBR1-210ENST00000434503 PPP1R42Q7Z4L9 355 aa27.18■■□□□ 1.94
LMBR1-210ENST00000434503 LARGE2Q8N3Y3 721 aa27.18■■□□□ 1.94
LMBR1-210ENST00000434503 TCERG1O14776 1098 aaKnown RBP27.17■■□□□ 1.94
LMBR1-210ENST00000434503 PPEF1O14829 653 aaPredicted RBP27.17■■□□□ 1.94
LMBR1-210ENST00000434503 C3orf67Q6ZVT6 689 aa27.17■■□□□ 1.94
LMBR1-210ENST00000434503 TSPYL4Q9UJ04 414 aa27.17■■□□□ 1.94
LMBR1-210ENST00000434503 PARP10Q53GL7 1025 aa27.16■■□□□ 1.94
LMBR1-210ENST00000434503 LRP10Q7Z4F1 713 aa27.16■■□□□ 1.94
LMBR1-210ENST00000434503 SLC51AQ86UW1 340 aa27.16■■□□□ 1.94
LMBR1-210ENST00000434503 RASSF10A6NK89 507 aa27.15■■□□□ 1.94
LMBR1-210ENST00000434503 LMOD1P29536 600 aaPredicted RBP27.15■■□□□ 1.94
LMBR1-210ENST00000434503 TMPOP42166 694 aaKnown RBP27.15■■□□□ 1.94
LMBR1-210ENST00000434503 PDIA6Q15084 440 aa27.15■■□□□ 1.94
LMBR1-210ENST00000434503 AIDAQ96BJ3 306 aa27.15■■□□□ 1.94
LMBR1-210ENST00000434503 NLRP3Q96P20 1036 aa27.15■■□□□ 1.94
LMBR1-210ENST00000434503 PRDM10Q9NQV6 1147 aa27.15■■□□□ 1.94
LMBR1-210ENST00000434503 LTBP1Q14766 1721 aa27.15■■□□□ 1.94
LMBR1-210ENST00000434503 EIF2S2P20042 333 aaKnown RBP27.14■■□□□ 1.94
LMBR1-210ENST00000434503 DEFB115Q30KQ5 88 aa27.14■■□□□ 1.94
LMBR1-210ENST00000434503 WBP1LQ9NX94 342 aa27.14■■□□□ 1.94
LMBR1-210ENST00000434503 EPS15P42566 896 aa27.13■■□□□ 1.93
LMBR1-210ENST00000434503 CTCFP49711 727 aaPredicted RBP27.13■■□□□ 1.93
LMBR1-210ENST00000434503 SCNN1DP51172 638 aa27.13■■□□□ 1.93
LMBR1-210ENST00000434503 SLC10A5Q5PT55 438 aa27.13■■□□□ 1.93
LMBR1-210ENST00000434503 CCDC146Q8IYE0 955 aa27.13■■□□□ 1.93
LMBR1-210ENST00000434503 UTP14AQ9BVJ6 771 aaKnown RBP27.12■■□□□ 1.93
LMBR1-210ENST00000434503 PROSER3Q2NL68 480 aa27.11■■□□□ 1.93
LMBR1-210ENST00000434503 NIM1KQ8IY84 436 aa27.11■■□□□ 1.93
LMBR1-210ENST00000434503 TMX4Q9H1E5 349 aaPredicted RBP27.11■■□□□ 1.93
LMBR1-210ENST00000434503 DDX21Q9NR30 783 aaKnown RBP eCLIP27.11■■□□□ 1.93
LMBR1-210ENST00000434503 BABAM1Q9NWV8 329 aa27.11■■□□□ 1.93
LMBR1-210ENST00000434503 ATP6V0A2Q9Y487 856 aa27.11■■□□□ 1.93
LMBR1-210ENST00000434503 PPIP5K2O43314 1243 aa27.1■■□□□ 1.93
LMBR1-210ENST00000434503 ANXA1P04083 346 aa27.1■■□□□ 1.93
LMBR1-210ENST00000434503 ABT1Q9ULW3 272 aaKnown RBP27.1■■□□□ 1.93
LMBR1-210ENST00000434503 LMOD3Q0VAK6 560 aa27.09■■□□□ 1.93
LMBR1-210ENST00000434503 WDR43Q15061 677 aaKnown RBP eCLIP27.09■■□□□ 1.93
LMBR1-210ENST00000434503 NEUROD2Q15784 382 aa27.09■■□□□ 1.93
LMBR1-210ENST00000434503 USP50Q70EL3 339 aaPredicted RBP27.09■■□□□ 1.93
LMBR1-210ENST00000434503 VPS33BQ9H267 617 aa27.09■■□□□ 1.93
LMBR1-210ENST00000434503 AOC3Q16853 763 aa27.08■■□□□ 1.93
LMBR1-210ENST00000434503 WDR33Q9C0J8 1336 aaKnown RBP27.08■■□□□ 1.93
LMBR1-210ENST00000434503 ABCC4O15439 1325 aa27.07■■□□□ 1.92
LMBR1-210ENST00000434503 FMR1Q06787 632 aaKnown RBP eCLIP27.06■■□□□ 1.921e-7■■■■■ 29.7
LMBR1-210ENST00000434503 RUNDC1Q96C34 613 aa27.06■■□□□ 1.92
LMBR1-210ENST00000434503 PRKRIP1Q9H875 184 aaPredicted RBP27.06■■□□□ 1.92
LMBR1-210ENST00000434503 ANKRD36CQ5JPF3 1778 aa27.05■■□□□ 1.92
LMBR1-210ENST00000434503 BBOX1O75936 387 aa27.05■■□□□ 1.92
LMBR1-210ENST00000434503 LBX1P52954 281 aa27.05■■□□□ 1.92
LMBR1-210ENST00000434503 HSP90AB3PQ58FF7 597 aa27.05■■□□□ 1.92
LMBR1-210ENST00000434503 COPS6Q7L5N1 327 aa27.05■■□□□ 1.92
LMBR1-210ENST00000434503 SUPT20HQ8NEM7 779 aa27.05■■□□□ 1.92
LMBR1-210ENST00000434503 RTFDC1Q9BY42 306 aaPredicted RBP27.05■■□□□ 1.92
LMBR1-210ENST00000434503 ADAMTS8Q9UP79 889 aa27.05■■□□□ 1.92
LMBR1-210ENST00000434503 LAMB2P55268 1798 aa27.04■■□□□ 1.92
LMBR1-210ENST00000434503 MAP2K1Q02750 393 aaPredicted RBP27.04■■□□□ 1.92
LMBR1-210ENST00000434503 NLRP10Q86W26 655 aa27.04■■□□□ 1.92
LMBR1-210ENST00000434503 SP8Q8IXZ3 490 aa27.04■■□□□ 1.92
LMBR1-210ENST00000434503 NECTIN2Q92692 538 aa27.04■■□□□ 1.92
LMBR1-210ENST00000434503 GPRC5DQ9NZD1 345 aa27.04■■□□□ 1.92
LMBR1-210ENST00000434503 ZNRF3Q9ULT6 936 aa27.04■■□□□ 1.92
LMBR1-210ENST00000434503 HCLS1P14317 486 aaPredicted RBP27.03■■□□□ 1.92
LMBR1-210ENST00000434503 CXCL9Q07325 125 aa27.03■■□□□ 1.92
LMBR1-210ENST00000434503 AIMP1Q12904 312 aaKnown RBP27.03■■□□□ 1.92
LMBR1-210ENST00000434503 XAGE3Q8WTP9 111 aa27.03■■□□□ 1.92
LMBR1-210ENST00000434503 CST9Q5W186 159 aa27.02■■□□□ 1.92
LMBR1-210ENST00000434503 ADARB2Q9NS39 739 aaKnown RBP27.02■■□□□ 1.92
LMBR1-210ENST00000434503 TRIM35Q9UPQ4 493 aa27.02■■□□□ 1.92
LMBR1-210ENST00000434503 TRPM7Q96QT4 1865 aa27.02■■□□□ 1.92
LMBR1-210ENST00000434503 TRAF5O00463 557 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms