RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CHL1O00533 1208 aa28.54■■■□□ 2.16
RPUSD3-206ENST00000433535 C3orf67Q6ZVT6 689 aa28.54■■■□□ 2.16
RPUSD3-206ENST00000433535 ZNF541Q9H0D2 1346 aa28.53■■■□□ 2.16
RPUSD3-206ENST00000433535 SLC51AQ86UW1 340 aa28.53■■■□□ 2.16
RPUSD3-206ENST00000433535 KLRG1Q96E93 195 aa28.53■■■□□ 2.16
RPUSD3-206ENST00000433535 AIMP1Q12904 312 aaKnown RBP28.52■■■□□ 2.16
RPUSD3-206ENST00000433535 PARP10Q53GL7 1025 aa28.52■■■□□ 2.16
RPUSD3-206ENST00000433535 PPP1R42Q7Z4L9 355 aa28.52■■■□□ 2.16
RPUSD3-206ENST00000433535 XAGE3Q8WTP9 111 aa28.52■■■□□ 2.16
RPUSD3-206ENST00000433535 POTEIP0CG38 1075 aa28.51■■■□□ 2.15
RPUSD3-206ENST00000433535 POTEJP0CG39 1038 aa28.51■■■□□ 2.15
RPUSD3-206ENST00000433535 COPS6Q7L5N1 327 aa28.51■■■□□ 2.15
RPUSD3-206ENST00000433535 SYNE4Q8N205 404 aa28.51■■■□□ 2.15
RPUSD3-206ENST00000433535 HOXA10P31260 410 aaPredicted RBP28.5■■■□□ 2.15
RPUSD3-206ENST00000433535 IARSP41252 1262 aaKnown RBP28.5■■■□□ 2.15
RPUSD3-206ENST00000433535 SCN4AP35499 1836 aa28.49■■■□□ 2.15
RPUSD3-206ENST00000433535 UTP14AQ9BVJ6 771 aaKnown RBP28.49■■■□□ 2.15
RPUSD3-206ENST00000433535 COL4A5P29400 1685 aa28.48■■■□□ 2.15
RPUSD3-206ENST00000433535 LAMB2P55268 1798 aa28.48■■■□□ 2.15
RPUSD3-206ENST00000433535 RBM17Q96I25 401 aaKnown RBP28.48■■■□□ 2.15
RPUSD3-206ENST00000433535 CHPF2Q9P2E5 772 aa28.48■■■□□ 2.15
RPUSD3-206ENST00000433535 TCERG1O14776 1098 aaKnown RBP28.47■■■□□ 2.15
RPUSD3-206ENST00000433535 PPEF1O14829 653 aaPredicted RBP28.47■■■□□ 2.15
RPUSD3-206ENST00000433535 L3MBTL3Q96JM7 780 aaPredicted RBP28.47■■■□□ 2.15
RPUSD3-206ENST00000433535 PSMD1Q99460 953 aa28.47■■■□□ 2.15
RPUSD3-206ENST00000433535 DDX21Q9NR30 783 aaKnown RBP eCLIP28.47■■■□□ 2.15
RPUSD3-206ENST00000433535 CRAMP1Q96RY5 1269 aa28.46■■■□□ 2.15
RPUSD3-206ENST00000433535 IQCA1LA6NCM1 817 aa28.45■■■□□ 2.14
RPUSD3-206ENST00000433535 ZEB1P37275 1124 aaPredicted RBP28.45■■■□□ 2.14
RPUSD3-206ENST00000433535 HDGFL1Q5TGJ6 251 aa28.45■■■□□ 2.14
RPUSD3-206ENST00000433535 CHADLQ6NUI6 762 aa28.45■■■□□ 2.14
RPUSD3-206ENST00000433535 HSP90AB3PQ58FF7 597 aa28.44■■■□□ 2.14
RPUSD3-206ENST00000433535 CC2D2BQ6DHV5 1058 aa28.44■■■□□ 2.14
RPUSD3-206ENST00000433535 NLRP10Q86W26 655 aa28.44■■■□□ 2.14
RPUSD3-206ENST00000433535 NLRP3Q96P20 1036 aa28.44■■■□□ 2.14
RPUSD3-206ENST00000433535 FZD9O00144 591 aa28.43■■■□□ 2.14
RPUSD3-206ENST00000433535 JMYQ8N9B5 988 aa28.43■■■□□ 2.14
RPUSD3-206ENST00000433535 ZNF428Q96B54 188 aa28.43■■■□□ 2.14
RPUSD3-206ENST00000433535 CFAP44Q96MT7 982 aa28.43■■■□□ 2.14
RPUSD3-206ENST00000433535 TAF1DQ9H5J8 278 aaPredicted RBP28.43■■■□□ 2.14
RPUSD3-206ENST00000433535 SLC10A5Q5PT55 438 aa28.42■■■□□ 2.14
RPUSD3-206ENST00000433535 IFFO2Q5TF58 517 aa28.42■■■□□ 2.14
RPUSD3-206ENST00000433535 MBIPQ9NS73 344 aa28.42■■■□□ 2.14
RPUSD3-206ENST00000433535 RNF123Q5XPI4 1314 aa28.42■■■□□ 2.14
RPUSD3-206ENST00000433535 APAF1O14727 1248 aa28.41■■■□□ 2.14
RPUSD3-206ENST00000433535 HOXB7P09629 217 aa28.41■■■□□ 2.14
RPUSD3-206ENST00000433535 HCLS1P14317 486 aaPredicted RBP28.41■■■□□ 2.14
RPUSD3-206ENST00000433535 TCIRG1Q13488 830 aa28.41■■■□□ 2.14
RPUSD3-206ENST00000433535 JDP2Q8WYK2 163 aa28.41■■■□□ 2.14
RPUSD3-206ENST00000433535 ABCC4O15439 1325 aa28.41■■■□□ 2.14
RPUSD3-206ENST00000433535 EAPPQ56P03 285 aaPredicted RBP28.39■■■□□ 2.14
RPUSD3-206ENST00000433535 DUSP27Q5VZP5 1158 aa28.39■■■□□ 2.14
RPUSD3-206ENST00000433535 LDHDQ86WU2 507 aa28.39■■■□□ 2.14
RPUSD3-206ENST00000433535 TRMT112Q9UI30 125 aaKnown RBP28.39■■■□□ 2.14
RPUSD3-206ENST00000433535 HACL1Q9UJ83 578 aa28.39■■■□□ 2.14
RPUSD3-206ENST00000433535 ADAMTSL1Q8N6G6 1762 aa28.39■■■□□ 2.13
RPUSD3-206ENST00000433535 DDX60Q8IY21 1712 aaKnown RBP28.38■■■□□ 2.13
RPUSD3-206ENST00000433535 GPC2Q8N158 579 aa28.37■■■□□ 2.13
RPUSD3-206ENST00000433535 LARGE2Q8N3Y3 721 aa28.37■■■□□ 2.13
RPUSD3-206ENST00000433535 PLBD2Q8NHP8 589 aa28.37■■■□□ 2.13
RPUSD3-206ENST00000433535 DBF4Q9UBU7 674 aaPredicted RBP28.37■■■□□ 2.13
RPUSD3-206ENST00000433535 SH3TC1Q8TE82 1336 aa28.37■■■□□ 2.13
RPUSD3-206ENST00000433535 ZNF853P0CG23 659 aa28.36■■■□□ 2.13
RPUSD3-206ENST00000433535 EPHX2P34913 555 aa28.36■■■□□ 2.13
RPUSD3-206ENST00000433535 GRIPAP1Q4V328 841 aa28.36■■■□□ 2.13
RPUSD3-206ENST00000433535 ATP6V0A2Q9Y487 856 aa28.36■■■□□ 2.13
RPUSD3-206ENST00000433535 TAF1P21675 1872 aa28.36■■■□□ 2.13
RPUSD3-206ENST00000433535 LTBP1Q14766 1721 aa28.35■■■□□ 2.13
RPUSD3-206ENST00000433535 EIF6P56537 245 aaKnown RBP28.35■■■□□ 2.13
RPUSD3-206ENST00000433535 GJA3Q9Y6H8 435 aa28.35■■■□□ 2.13
RPUSD3-206ENST00000433535 ANKRD13DQ6ZTN6 518 aa28.34■■■□□ 2.13
RPUSD3-206ENST00000433535 IFT57Q9NWB7 429 aa28.34■■■□□ 2.13
RPUSD3-206ENST00000433535 ATP5J2-PTCD1G3V325 749 aa28.33■■■□□ 2.13
RPUSD3-206ENST00000433535 TMX4Q9H1E5 349 aaPredicted RBP28.33■■■□□ 2.13
RPUSD3-206ENST00000433535 PPIP5K2O43314 1243 aa28.32■■■□□ 2.12
RPUSD3-206ENST00000433535 AOC3Q16853 763 aa28.32■■■□□ 2.12
RPUSD3-206ENST00000433535 CREBZFQ9NS37 354 aa28.32■■■□□ 2.12
RPUSD3-206ENST00000433535 HYPKQ9NX55 129 aa28.32■■■□□ 2.12
RPUSD3-206ENST00000433535 CLEC11AQ9Y240 323 aa28.32■■■□□ 2.12
RPUSD3-206ENST00000433535 PASKQ96RG2 1323 aa28.32■■■□□ 2.12
RPUSD3-206ENST00000433535 CCDC184Q52MB2 194 aa28.31■■■□□ 2.12
RPUSD3-206ENST00000433535 NIM1KQ8IY84 436 aa28.31■■■□□ 2.12
RPUSD3-206ENST00000433535 ISCA1Q9BUE6 129 aa28.31■■■□□ 2.12
RPUSD3-206ENST00000433535 ELL2O00472 640 aaPredicted RBP28.3■■■□□ 2.12
RPUSD3-206ENST00000433535 GNAI1P63096 354 aa28.3■■■□□ 2.12
RPUSD3-206ENST00000433535 DDX46Q7L014 1031 aaKnown RBP28.3■■■□□ 2.12
RPUSD3-206ENST00000433535 CALD1Q05682 793 aaKnown RBP28.29■■■□□ 2.12
RPUSD3-206ENST00000433535 MKRN1Q9UHC7 482 aaKnown RBP28.29■■■□□ 2.12
RPUSD3-206ENST00000433535 LRRC37AA6NMS7 1700 aa28.29■■■□□ 2.12
RPUSD3-206ENST00000433535 BBOX1O75936 387 aa28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 GRAPQ13588 217 aa28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 PNMA8AQ86V59 439 aaPredicted RBP28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 SP8Q8IXZ3 490 aa28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 GRAPLQ8TC17 118 aaPredicted RBP28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 FAM89AQ96GI7 184 aa28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 COL4A1P02462 1669 aa28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 DUOX1Q9NRD9 1551 aa28.28■■■□□ 2.12
RPUSD3-206ENST00000433535 ITGBL1O95965 494 aaPredicted RBP28.27■■■□□ 2.12
RPUSD3-206ENST00000433535 SCNN1DP51172 638 aa28.27■■■□□ 2.12
RPUSD3-206ENST00000433535 RTL5Q5HYW3 569 aaPredicted RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms