RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 UVSSAQ2YD98 709 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 CALML4Q96GE6 196 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 METAP2P50579 478 aaKnown RBP eCLIP13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 CTAGE9A4FU28 777 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 PTGS1P23219 599 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 HSPA4P34932 840 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 SLC26A6Q9BXS9 759 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 CCDC141Q6ZP82 1450 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 SYKP43405 635 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 AFMP43652 599 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 TMX3Q96JJ7 454 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 SCLT1Q96NL6 688 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 PTPRCP08575 1304 aa13.45□□□□□ -0.26
RIMKLA-202ENST00000431473 CLCN1P35523 988 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 TERF1P54274 439 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 MAP3K2Q9Y2U5 619 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 PPP4R3AQ6IN85 833 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 ZNF444Q8N0Y2 327 aaPredicted RBP13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 USP16Q9Y5T5 823 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 CAMSAP2Q08AD1 1489 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 FAM114A1Q8IWE2 563 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 ZC3H6P61129 1189 aaKnown RBP13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 TCP11L1Q9NUJ3 509 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 MPRIPQ6WCQ1 1025 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 PPM1EQ8WY54 764 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 N4BP3O15049 544 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 IVLP07476 585 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 LRRC2Q9BYS8 371 aa13.44□□□□□ -0.26
RIMKLA-202ENST00000431473 NUCB1Q02818 461 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 CCDC102BQ68D86 513 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 PUF60Q9UHX1 559 aaKnown RBP13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 EHBP1Q8NDI1 1231 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 SYT1P21579 422 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 SYCP3Q8IZU3 236 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 NEK1Q96PY6 1258 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 HYPKQ9NX55 129 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 AMPD3Q01432 767 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 EXOC1Q9NV70 894 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 IDEP14735 1019 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 IGSF3O75054 1194 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 PRDM11Q9NQV5 511 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 CAPN2P17655 700 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 CAPZA3Q96KX2 299 aa13.43□□□□□ -0.26
RIMKLA-202ENST00000431473 NAIPQ13075 1403 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 IKBKGQ9Y6K9 419 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 SLC5A1P13866 664 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 IARSP41252 1262 aaKnown RBP13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 BBXQ8WY36 941 aaPredicted RBP13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 FERMT2Q96AC1 680 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 VPS18Q9P253 973 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 PRC1O43663 620 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 ANKS4BQ8N8V4 417 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 CUL5Q93034 780 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 MICALL1Q8N3F8 863 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 PPP1R14CQ8TAE6 165 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 CCDC186Q7Z3E2 898 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 CETN1Q12798 172 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 KIAA0753Q2KHM9 967 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 SDSP20132 328 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 FLIIQ13045 1269 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 DNAJC25Q9H1X3 360 aa13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 ORC3Q9UBD5 711 aaPredicted RBP13.42□□□□□ -0.26
RIMKLA-202ENST00000431473 CAVIN2O95810 425 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 SPATA24Q86W54 205 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 DNM1Q05193 864 aaKnown RBP13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 CKAP4Q07065 602 aaKnown RBP13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 DNAJC21Q5F1R6 531 aaKnown RBP13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 MFSD6Q6ZSS7 791 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 RNF41Q9H4P4 317 aaPredicted RBP13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 MARCKSP29966 332 aaPredicted RBP13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 C6orf163Q5TEZ5 329 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 KIF4AO95239 1232 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 TTC16Q8NEE8 873 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 CCDC94Q9BW85 323 aaPredicted RBP13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 CCDC160A6NGH7 325 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 STAT6P42226 847 aa13.41□□□□□ -0.26
RIMKLA-202ENST00000431473 UBA7P41226 1012 aa13.4□□□□□ -0.26
RIMKLA-202ENST00000431473 ATRIPQ8WXE1 791 aa13.4□□□□□ -0.26
RIMKLA-202ENST00000431473 PPP1R42Q7Z4L9 355 aa13.4□□□□□ -0.26
RIMKLA-202ENST00000431473 CCDC155Q8N6L0 562 aa13.4□□□□□ -0.26
RIMKLA-202ENST00000431473 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
RIMKLA-202ENST00000431473 FAM83GA6ND36 823 aa13.4□□□□□ -0.26
RIMKLA-202ENST00000431473 COMMD10Q9Y6G5 202 aa13.4□□□□□ -0.26
RIMKLA-202ENST00000431473 NCOA1Q15788 1441 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms