RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 SNED1Q8TER0 1413 aa17.79■□□□□ 0.44
GCSHP3-201ENST00000431120 UBN2Q6ZU65 1347 aa17.78■□□□□ 0.44
GCSHP3-201ENST00000431120 GPTP24298 496 aa17.78■□□□□ 0.44
GCSHP3-201ENST00000431120 TMPOP42166 694 aaKnown RBP17.78■□□□□ 0.44
GCSHP3-201ENST00000431120 PNMA8AQ86V59 439 aaPredicted RBP17.78■□□□□ 0.44
GCSHP3-201ENST00000431120 GPC2Q8N158 579 aa17.78■□□□□ 0.44
GCSHP3-201ENST00000431120 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
GCSHP3-201ENST00000431120 NTSR2O95665 410 aa17.77■□□□□ 0.44
GCSHP3-201ENST00000431120 PDIA6Q15084 440 aa17.77■□□□□ 0.44
GCSHP3-201ENST00000431120 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
GCSHP3-201ENST00000431120 OLFM4Q6UX06 510 aa17.77■□□□□ 0.44
GCSHP3-201ENST00000431120 LRP10Q7Z4F1 713 aa17.77■□□□□ 0.44
GCSHP3-201ENST00000431120 PASKQ96RG2 1323 aa17.76■□□□□ 0.43
GCSHP3-201ENST00000431120 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
GCSHP3-201ENST00000431120 ZNF541Q9H0D2 1346 aa17.76■□□□□ 0.43
GCSHP3-201ENST00000431120 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
GCSHP3-201ENST00000431120 NLRP3Q96P20 1036 aa17.76■□□□□ 0.43
GCSHP3-201ENST00000431120 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
GCSHP3-201ENST00000431120 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
GCSHP3-201ENST00000431120 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
GCSHP3-201ENST00000431120 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
GCSHP3-201ENST00000431120 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
GCSHP3-201ENST00000431120 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
GCSHP3-201ENST00000431120 EPHX2P34913 555 aa17.74■□□□□ 0.43
GCSHP3-201ENST00000431120 EIF6P56537 245 aaKnown RBP17.74■□□□□ 0.43
GCSHP3-201ENST00000431120 COL13A1Q5TAT6 717 aaPredicted RBP17.73■□□□□ 0.43
GCSHP3-201ENST00000431120 CHL1O00533 1208 aa17.72■□□□□ 0.43
GCSHP3-201ENST00000431120 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
GCSHP3-201ENST00000431120 ITGBL1O95965 494 aaPredicted RBP17.72■□□□□ 0.43
GCSHP3-201ENST00000431120 HSPA1AP0DMV8 641 aaKnown RBP17.72■□□□□ 0.43
GCSHP3-201ENST00000431120 HSPA1BP0DMV9 641 aaKnown RBP17.72■□□□□ 0.43
GCSHP3-201ENST00000431120 EAPPQ56P03 285 aaPredicted RBP17.72■□□□□ 0.43
GCSHP3-201ENST00000431120 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
GCSHP3-201ENST00000431120 TMEM88BA6NKF7 163 aa17.71■□□□□ 0.43
GCSHP3-201ENST00000431120 BBOX1O75936 387 aa17.71■□□□□ 0.43
GCSHP3-201ENST00000431120 HOXB7P09629 217 aa17.71■□□□□ 0.43
GCSHP3-201ENST00000431120 LARGE2Q8N3Y3 721 aa17.71■□□□□ 0.43
GCSHP3-201ENST00000431120 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
GCSHP3-201ENST00000431120 ATP6V0A2Q9Y487 856 aa17.71■□□□□ 0.43
GCSHP3-201ENST00000431120 CNTNAP1P78357 1384 aa17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 LMOD1P29536 600 aaPredicted RBP17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 DDX10Q13206 875 aaKnown RBP17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 SUPT20HQ8NEM7 779 aa17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 CLEC11AQ9Y240 323 aa17.7■□□□□ 0.42
GCSHP3-201ENST00000431120 TCIRG1Q13488 830 aa17.69■□□□□ 0.42
GCSHP3-201ENST00000431120 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
GCSHP3-201ENST00000431120 MKRN1Q9UHC7 482 aaKnown RBP17.69■□□□□ 0.42
GCSHP3-201ENST00000431120 ADAMTSL1Q8N6G6 1762 aa17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 C3orf67Q6ZVT6 689 aa17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 NIM1KQ8IY84 436 aa17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 TNS4Q8IZW8 715 aa17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 CNTROBQ8N137 903 aa17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 XAGE3Q8WTP9 111 aa17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 SH3TC1Q8TE82 1336 aa17.68■□□□□ 0.42
GCSHP3-201ENST00000431120 ANXA1P04083 346 aa17.67■□□□□ 0.42
GCSHP3-201ENST00000431120 NEUROD2Q15784 382 aa17.67■□□□□ 0.42
GCSHP3-201ENST00000431120 TMC4Q7Z404 712 aa17.67■□□□□ 0.42
GCSHP3-201ENST00000431120 SP8Q8IXZ3 490 aa17.67■□□□□ 0.42
GCSHP3-201ENST00000431120 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
GCSHP3-201ENST00000431120 GJA3Q9Y6H8 435 aa17.67■□□□□ 0.42
GCSHP3-201ENST00000431120 ABCC4O15439 1325 aa17.67■□□□□ 0.42
GCSHP3-201ENST00000431120 PPIP5K2O43314 1243 aa17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 USP50Q70EL3 339 aaPredicted RBP17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 DDX46Q7L014 1031 aaKnown RBP17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 CFAP44Q96MT7 982 aa17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 DBF4Q9UBU7 674 aaPredicted RBP17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 TRMT112Q9UI30 125 aaKnown RBP17.66■□□□□ 0.42
GCSHP3-201ENST00000431120 COL4A5P29400 1685 aa17.65■□□□□ 0.42
GCSHP3-201ENST00000431120 SCNN1DP51172 638 aa17.65■□□□□ 0.42
GCSHP3-201ENST00000431120 ZNRF3Q9ULT6 936 aa17.65■□□□□ 0.42
GCSHP3-201ENST00000431120 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 RASSF10A6NK89 507 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 GRAPQ13588 217 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 HDGFL1Q5TGJ6 251 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 MAP1SQ66K74 1059 aaPredicted RBP17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 DPP8Q6V1X1 898 aaPredicted RBP17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 ANKRD13DQ6ZTN6 518 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 MPNDQ8N594 471 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 GRAPLQ8TC17 118 aaPredicted RBP17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 NECTIN2Q92692 538 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 HYPKQ9NX55 129 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 CHPF2Q9P2E5 772 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 ADAMTS8Q9UP79 889 aa17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 LAS1LQ9Y4W2 734 aaKnown RBP17.64■□□□□ 0.41
GCSHP3-201ENST00000431120 HCLS1P14317 486 aaPredicted RBP17.63■□□□□ 0.41
GCSHP3-201ENST00000431120 AOC3Q16853 763 aa17.63■□□□□ 0.41
GCSHP3-201ENST00000431120 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
GCSHP3-201ENST00000431120 EPS15P42566 896 aa17.62■□□□□ 0.41
GCSHP3-201ENST00000431120 VEGFBP49765 207 aa17.62■□□□□ 0.41
GCSHP3-201ENST00000431120 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
GCSHP3-201ENST00000431120 KIAA2012Q0VF49 1180 aa17.62■□□□□ 0.41
GCSHP3-201ENST00000431120 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms